Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03558
Experiment: PYE with CHIR-090 10 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with CHIR-090 10 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,713,083 | - | -0.3 | |||
3,713,103 | + | +0.6 | |||
3,713,174 | - | CCNA_03557 | 0.12 | +0.5 | |
3,713,201 | - | CCNA_03557 | 0.16 | +0.1 | |
3,713,252 | - | CCNA_03557 | 0.23 | +0.7 | |
3,713,316 | - | CCNA_03557 | 0.32 | +0.1 | |
3,713,316 | - | CCNA_03557 | 0.32 | +0.3 | |
3,713,326 | - | CCNA_03557 | 0.33 | -0.1 | |
3,713,330 | + | CCNA_03557 | 0.34 | +0.3 | |
3,713,338 | - | CCNA_03557 | 0.35 | +0.1 | |
3,713,338 | - | CCNA_03557 | 0.35 | +0.0 | |
3,713,381 | + | CCNA_03557 | 0.41 | +0.8 | |
3,713,418 | - | CCNA_03557 | 0.46 | +0.4 | |
3,713,524 | - | CCNA_03557 | 0.60 | +0.6 | |
3,713,547 | - | CCNA_03557 | 0.64 | +0.5 | |
3,713,547 | - | CCNA_03557 | 0.64 | -0.1 | |
3,713,547 | - | CCNA_03557 | 0.64 | -0.3 | |
3,713,578 | + | CCNA_03557 | 0.68 | +0.1 | |
3,713,701 | + | CCNA_03557 | 0.85 | +0.6 | |
3,713,706 | + | CCNA_03557 | 0.86 | -1.3 | |
3,713,869 | - | +0.2 | |||
3,713,881 | + | -0.9 | |||
3,713,991 | - | +0.0 | |||
3,713,991 | - | -0.0 | |||
3,714,016 | + | -0.2 |
Or see this region's nucleotide sequence