Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03408

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,574,821	+		CCNA_03407	0.32	-1.4
3,574,821	+		CCNA_03407	0.32	+0.7
3,574,826	+		CCNA_03407	0.33	-0.1
3,574,834	-		CCNA_03407	0.33	+0.9
3,574,881	-		CCNA_03407	0.37	-1.0
3,574,934	+		CCNA_03407	0.40	-0.7
3,574,952	-		CCNA_03407	0.42	-1.1
3,574,984	+		CCNA_03407	0.44	+0.5
3,574,987	-		CCNA_03407	0.44	+0.4
3,574,992	-		CCNA_03407	0.44	-0.0
3,575,000	+		CCNA_03407	0.45	-0.2
3,575,001	+		CCNA_03407	0.45	+0.5
3,575,118	+		CCNA_03407	0.53	+1.0
3,575,126	-		CCNA_03407	0.54	+0.6
3,575,127	-		CCNA_03407	0.54	-0.1
3,575,173	+		CCNA_03407	0.57	-0.7
3,575,176	-		CCNA_03407	0.57	+0.1
3,575,192	-		CCNA_03407	0.58	+0.7
3,575,320	+		CCNA_03407	0.67	+0.3
3,575,354	+		CCNA_03407	0.70	+1.4
3,575,389	+		CCNA_03407	0.72	-0.4
3,575,412	+		CCNA_03407	0.74	-0.3
3,575,447	+		CCNA_03407	0.76	-0.3
3,575,455	-		CCNA_03407	0.77	-0.4
3,575,516	+		CCNA_03407	0.81	+0.0
3,575,548	-		CCNA_03407	0.83	+0.5
3,575,567	+		CCNA_03407	0.84	-0.5
3,575,567	+		CCNA_03407	0.84	-1.9
3,575,575	-		CCNA_03407	0.85	-0.1
3,575,580	+		CCNA_03407	0.85	-2.1
3,575,580	+		CCNA_03407	0.85	+0.6
3,575,588	-		CCNA_03407	0.86	-0.1
3,575,631	-		CCNA_03407	0.89	-0.0
3,575,646	+				+0.2
3,575,687	-				+0.1
3,575,699	-				-1.8
3,575,777	-				+0.5
3,575,791	-				+0.0
3,575,791	-				+0.6
3,575,791	-				+0.2
3,575,791	-				+0.2
3,575,808	-				-0.1
3,575,831	+				-0.8
3,575,869	+				+1.8
3,575,898	-		CCNA_03408	0.12	+0.8
3,575,967	+		CCNA_03408	0.20	-2.2
3,575,975	-		CCNA_03408	0.21	+0.8
3,576,072	-		CCNA_03408	0.31	-0.9
3,576,080	-		CCNA_03408	0.32	-0.5
3,576,080	-		CCNA_03408	0.32	+0.6
3,576,086	-		CCNA_03408	0.33	+0.1
3,576,114	+		CCNA_03408	0.36	+0.5
3,576,129	-		CCNA_03408	0.37	-0.5
3,576,145	-		CCNA_03408	0.39	+1.4
3,576,190	-		CCNA_03408	0.44	+0.3
3,576,209	+		CCNA_03408	0.46	+0.0
3,576,210	+		CCNA_03408	0.46	+0.8
3,576,218	-		CCNA_03408	0.47	+0.2
3,576,224	-		CCNA_03408	0.48	+0.2
3,576,227	+		CCNA_03408	0.48	-0.9
3,576,235	-		CCNA_03408	0.49	+0.9
3,576,235	-		CCNA_03408	0.49	+0.2
3,576,254	-		CCNA_03408	0.51	+0.3
3,576,277	-		CCNA_03408	0.54	+0.0
3,576,290	+		CCNA_03408	0.55	-0.4
3,576,334	+		CCNA_03408	0.60	+0.2
3,576,334	+		CCNA_03408	0.60	-2.2
3,576,334	+		CCNA_03408	0.60	-0.5
3,576,334	+		CCNA_03408	0.60	+0.0
3,576,334	+		CCNA_03408	0.60	+1.1
3,576,340	+		CCNA_03408	0.60	-2.0
3,576,342	-		CCNA_03408	0.61	+1.4
3,576,342	-		CCNA_03408	0.61	+0.4
3,576,349	-		CCNA_03408	0.61	+1.1
3,576,355	-		CCNA_03408	0.62	-0.7
3,576,358	+		CCNA_03408	0.62	-0.0
3,576,359	+		CCNA_03408	0.63	-0.6
3,576,367	-		CCNA_03408	0.63	+0.4
3,576,395	+		CCNA_03408	0.66	-0.2
3,576,397	+		CCNA_03408	0.67	+1.4
3,576,448	-		CCNA_03408	0.72	+0.3
3,576,448	-		CCNA_03408	0.72	+0.6
3,576,489	+		CCNA_03408	0.77	-2.1
3,576,516	-		CCNA_03408	0.80	+0.8
3,576,533	-		CCNA_03408	0.81	+0.5
3,576,547	+		CCNA_03408	0.83	-2.1
3,576,564	+		CCNA_03408	0.85	-2.0
3,576,571	+		CCNA_03408	0.86	+0.0
3,576,572	-		CCNA_03408	0.86	+0.8
3,576,574	-		CCNA_03408	0.86	-0.5
3,576,579	-		CCNA_03408	0.86	+0.2
3,576,602	+		CCNA_03408	0.89	+0.6
3,576,610	-		CCNA_03408	0.90	-0.6
3,576,647	+				+0.8
3,576,647	+				-0.2
3,576,647	+				+1.1
3,576,647	+				+0.4
3,576,647	+				-0.8
3,576,647	+				-1.3
3,576,655	-				-0.3
3,576,655	-				+0.3
3,576,667	-				+0.4
3,576,678	+				+0.6
3,576,678	+				-1.2
3,576,686	-				-0.2
3,576,692	+				+1.7
3,576,692	+				+0.6
3,576,700	-				-0.7
3,576,705	-				+2.4
3,576,731	-				+0.2
3,576,737	+				-0.6
3,576,737	-				+1.0
3,576,741	-				+0.5
3,576,840	-		CCNA_03409	0.10	+0.7
3,576,846	+		CCNA_03409	0.11	-1.2
3,576,851	+		CCNA_03409	0.12	-0.3
3,576,851	+		CCNA_03409	0.12	-0.1
3,576,856	+		CCNA_03409	0.12	+0.2
3,576,859	-		CCNA_03409	0.12	+0.5
3,576,859	-		CCNA_03409	0.12	+0.1
3,576,859	-		CCNA_03409	0.12	+0.2
3,576,859	-		CCNA_03409	0.12	+0.6
3,576,859	-		CCNA_03409	0.12	-0.1
3,576,889	-		CCNA_03409	0.16	-0.4
3,576,898	+		CCNA_03409	0.17	-0.7
3,576,909	+		CCNA_03409	0.18	+0.3
3,576,916	+		CCNA_03409	0.18	-0.5
3,576,924	-		CCNA_03409	0.19	+0.6
3,576,952	-		CCNA_03409	0.22	+0.3
3,576,962	-		CCNA_03409	0.23	+1.3
3,577,052	+		CCNA_03409	0.33	+1.3
3,577,052	+		CCNA_03409	0.33	-0.2
3,577,052	-		CCNA_03409	0.33	-0.9
3,577,078	+		CCNA_03409	0.35	+0.2
3,577,109	-		CCNA_03409	0.39	+0.7
3,577,109	-		CCNA_03409	0.39	+0.9
3,577,114	-		CCNA_03409	0.39	+1.0
3,577,121	-		CCNA_03409	0.40	+1.0
3,577,169	+		CCNA_03409	0.45	-2.2
3,577,189	-		CCNA_03409	0.47	+0.5
3,577,189	-		CCNA_03409	0.47	-1.4
3,577,189	-		CCNA_03409	0.47	-0.9
3,577,194	+		CCNA_03409	0.47	-0.0
3,577,290	+		CCNA_03409	0.57	+0.3
3,577,309	+		CCNA_03409	0.59	+0.0
3,577,392	-		CCNA_03409	0.68	+2.8
3,577,406	+		CCNA_03409	0.70	-1.8
3,577,421	+		CCNA_03409	0.71	-1.3
3,577,429	-		CCNA_03409	0.72	+0.1
3,577,450	-		CCNA_03409	0.74	+0.6
3,577,468	-		CCNA_03409	0.76	-3.2
3,577,490	+		CCNA_03409	0.78	+0.2
3,577,538	-		CCNA_03409	0.83	-0.1
3,577,583	-		CCNA_03409	0.88	+0.9
3,577,583	-		CCNA_03409	0.88	-0.1
3,577,651	+				-0.6
3,577,651	+				-0.9
3,577,651	+				-0.4
3,577,651	+				-0.3
3,577,654	-				-0.8