Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03290

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,456,437	-				+0.3
3,456,528	-				+0.3
3,456,528	-				+0.2
3,456,528	-				+0.2
3,456,611	+		CCNA_03287	0.57	-0.2
3,456,618	-		CCNA_03287	0.59	+0.3
3,456,619	-		CCNA_03287	0.60	+0.7
3,456,619	-		CCNA_03287	0.60	+0.3
3,456,619	-		CCNA_03287	0.60	+0.4
3,456,779	+				+0.1
3,456,825	+				-0.7
3,456,833	-				-0.8
3,456,833	-				-0.2
3,456,833	-				-1.3
3,456,833	-				-1.3
3,456,890	-		CCNA_03288	0.38	+0.9
3,456,921	-		CCNA_03288	0.54	+0.5
3,456,937	+		CCNA_03288	0.63	-0.4
3,457,237	+		CCNA_03289	0.57	+0.1
3,457,247	-		CCNA_03289	0.60	-1.7
3,457,271	+		CCNA_03289	0.66	+0.5
3,457,286	+		CCNA_03289	0.69	-0.1
3,457,306	+		CCNA_03289	0.74	-0.2
3,457,342	+		CCNA_03289	0.84	+0.6
3,457,362	+		CCNA_03289	0.89	+0.3
3,457,401	+				+0.9
3,457,401	+				+0.5
3,457,401	+				+1.8
3,457,401	+				+0.6
3,457,409	-				+0.2
3,457,409	-				-2.3
3,457,409	-				-1.2
3,457,409	-				-4.2
3,457,409	-				-0.4
3,457,409	-				+0.2
3,457,409	-				+0.4
3,457,409	-				-0.8
3,457,415	+				+0.2
3,457,420	-				+1.1
3,457,429	-				+0.8
3,457,440	+				-0.6
3,457,455	+				+0.1
3,457,502	+		CCNA_03290	0.18	+0.3
3,457,508	-		CCNA_03290	0.19	-1.0
3,457,518	-		CCNA_03290	0.22	+0.7
3,457,528	+		CCNA_03290	0.24	+0.3
3,457,570	-		CCNA_03290	0.32	+0.1
3,457,570	-		CCNA_03290	0.32	-2.5
3,457,579	+		CCNA_03290	0.34	+0.2
3,457,581	-		CCNA_03290	0.35	+0.3
3,457,648	+		CCNA_03290	0.49	-0.9
3,457,661	-		CCNA_03290	0.52	-0.0
3,457,682	-		CCNA_03290	0.56	+0.3
3,457,720	-		CCNA_03290	0.64	-1.1
3,457,721	-		CCNA_03290	0.64	-0.0
3,457,735	+		CCNA_03290	0.67	+0.0
3,457,743	-		CCNA_03290	0.69	+0.3
3,457,747	+		CCNA_03290	0.70	+0.3
3,457,771	+		CCNA_03290	0.75	-0.2
3,457,779	-		CCNA_03290	0.76	+1.1
3,457,814	-		CCNA_03290	0.84	+0.3
3,457,823	+		CCNA_03290	0.86	+0.3
3,457,843	+		CCNA_03290	0.90	-2.5
3,457,851	-				+0.7
3,457,870	+				+1.1
3,457,875	+				+0.0
3,457,875	+				-1.3
3,457,878	-				-0.9
3,457,878	-				+0.1
3,457,878	-				-0.5
3,457,883	-				-0.0
3,457,952	+				+0.4
3,457,952	+				-1.2
3,457,960	-				+0.2
3,457,960	-				+1.3
3,457,974	+				+0.9
3,457,974	+				-0.3
3,457,979	-				-1.6
3,457,982	-				+0.3
3,458,052	+		CCNA_03291	0.10	-0.9
3,458,060	-		CCNA_03291	0.11	+0.7
3,458,060	-		CCNA_03291	0.11	+0.6
3,458,084	+		CCNA_03291	0.14	-0.1
3,458,084	+		CCNA_03291	0.14	-0.8
3,458,084	+		CCNA_03291	0.14	-1.2
3,458,084	+		CCNA_03291	0.14	-0.6
3,458,092	-		CCNA_03291	0.14	-0.3
3,458,092	-		CCNA_03291	0.14	-0.6
3,458,092	-		CCNA_03291	0.14	+0.6
3,458,228	+		CCNA_03291	0.28	+0.5
3,458,246	+		CCNA_03291	0.30	+0.3
3,458,246	+		CCNA_03291	0.30	-0.1
3,458,254	-		CCNA_03291	0.31	+1.7
3,458,275	-		CCNA_03291	0.33	-0.4
3,458,336	+		CCNA_03291	0.39	-1.1
3,458,357	+		CCNA_03291	0.41	+0.1
3,458,365	-		CCNA_03291	0.42	-1.1
3,458,371	-		CCNA_03291	0.42	+0.6
3,458,381	+		CCNA_03291	0.43	-1.8
3,458,396	+		CCNA_03291	0.45	-1.2
3,458,449	+		CCNA_03291	0.50	-0.3
3,458,458	+		CCNA_03291	0.51	-0.5
3,458,494	+		CCNA_03291	0.55	+0.9
3,458,495	+		CCNA_03291	0.55	-1.6
3,458,507	+		CCNA_03291	0.56	-0.1
3,458,507	+		CCNA_03291	0.56	-0.3
3,458,531	+		CCNA_03291	0.58	+0.7
3,458,542	-		CCNA_03291	0.59	+0.2
3,458,575	+		CCNA_03291	0.63	-0.9
3,458,580	+		CCNA_03291	0.63	-2.3
3,458,580	+		CCNA_03291	0.63	+0.1
3,458,605	-		CCNA_03291	0.66	+0.4
3,458,622	+		CCNA_03291	0.67	-0.2
3,458,630	-		CCNA_03291	0.68	+1.9
3,458,630	-		CCNA_03291	0.68	-0.4
3,458,679	-		CCNA_03291	0.73	-0.3
3,458,691	-		CCNA_03291	0.74	+0.2
3,458,706	+		CCNA_03291	0.76	+0.4
3,458,714	+		CCNA_03291	0.77	-0.1
3,458,714	-		CCNA_03291	0.77	+0.8
3,458,722	-		CCNA_03291	0.77	-1.6
3,458,733	+		CCNA_03291	0.78	+0.6
3,458,741	-		CCNA_03291	0.79	+0.4
3,458,787	+		CCNA_03291	0.84	+0.1
3,458,795	-		CCNA_03291	0.85	-0.0
3,458,795	-		CCNA_03291	0.85	-0.2
3,458,805	-		CCNA_03291	0.86	+0.1
3,458,823	+		CCNA_03291	0.87	+0.6
3,458,891	-				-0.1