Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03242

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
3,406,327	+		CCNA_03241	0.42	-0.8
3,406,342	+		CCNA_03241	0.43	+0.6
3,406,372	+		CCNA_03241	0.45	-0.2
3,406,373	+		CCNA_03241	0.45	+0.4
3,406,373	+		CCNA_03241	0.45	+0.4
3,406,426	-		CCNA_03241	0.49	-0.5
3,406,428	+		CCNA_03241	0.49	+0.0
3,406,526	-		CCNA_03241	0.56	-0.4
3,406,527	-		CCNA_03241	0.56	+0.7
3,406,532	-		CCNA_03241	0.57	-2.6
3,406,572	-		CCNA_03241	0.60	+0.2
3,406,664	-		CCNA_03241	0.66	+0.8
3,406,664	-		CCNA_03241	0.66	-1.1
3,406,671	-		CCNA_03241	0.67	-1.3
3,406,677	+		CCNA_03241	0.67	+0.5
3,406,690	+		CCNA_03241	0.68	-2.1
3,406,720	-		CCNA_03241	0.70	-0.7
3,406,742	-		CCNA_03241	0.72	+0.2
3,406,780	-		CCNA_03241	0.74	-0.9
3,406,783	+		CCNA_03241	0.75	-1.4
3,406,783	+		CCNA_03241	0.75	-1.0
3,406,791	-		CCNA_03241	0.75	+0.2
3,406,793	+		CCNA_03241	0.75	-0.9
3,406,844	-		CCNA_03241	0.79	-0.5
3,406,864	-		CCNA_03241	0.80	-1.4
3,406,867	+		CCNA_03241	0.81	-1.3
3,406,875	-		CCNA_03241	0.81	+0.3
3,406,888	+		CCNA_03241	0.82	-0.9
3,406,896	-		CCNA_03241	0.83	-1.2
3,406,946	+		CCNA_03241	0.86	-0.2
3,406,952	-		CCNA_03241	0.87	-1.1
3,406,954	-		CCNA_03241	0.87	-0.8
3,407,049	+				+0.1
3,407,060	-				-0.2
3,407,097	+				-1.6
3,407,105	-				+0.8
3,407,153	-				+0.9
3,407,167	+				-0.6
3,407,167	+				+0.7
3,407,167	+				-0.7
3,407,177	+				-1.1
3,407,177	+				-0.1
3,407,177	+				+0.2
3,407,180	-				+0.4
3,407,185	-				-0.0
3,407,185	-				+0.1
3,407,185	-				+0.7
3,407,185	-				-0.5
3,407,185	-				+0.0
3,407,205	-				+0.1
3,407,207	+				+1.8
3,407,212	+				-0.0
3,407,215	-				-0.3
3,407,247	-				+1.5
3,407,271	-				+0.1
3,407,271	-				-1.2
3,407,271	-				-1.1
3,407,292	+				-0.5
3,407,314	+				-0.1
3,407,330	-				+0.6
3,407,341	+				+2.4
3,407,349	-				+0.8
3,407,353	+				+0.9
3,407,354	-				-2.3
3,407,355	+				+0.3
3,407,390	-				+1.8
3,407,428	-		CCNA_03242	0.11	-1.3
3,407,492	-		CCNA_03242	0.16	+0.4
3,407,498	+		CCNA_03242	0.16	-0.3
3,407,498	+		CCNA_03242	0.16	-1.1
3,407,498	+		CCNA_03242	0.16	-2.0
3,407,501	-		CCNA_03242	0.16	-0.3
3,407,506	-		CCNA_03242	0.16	+1.0
3,407,506	-		CCNA_03242	0.16	+0.5
3,407,528	+		CCNA_03242	0.18	+0.9
3,407,536	+		CCNA_03242	0.19	+0.8
3,407,536	-		CCNA_03242	0.19	+0.5
3,407,547	+		CCNA_03242	0.19	-2.1
3,407,555	-		CCNA_03242	0.20	+0.1
3,407,597	+		CCNA_03242	0.23	-0.4
3,407,597	+		CCNA_03242	0.23	-1.6
3,407,597	+		CCNA_03242	0.23	+0.5
3,407,597	+		CCNA_03242	0.23	-0.1
3,407,607	+		CCNA_03242	0.23	-0.3
3,407,610	-		CCNA_03242	0.24	+0.7
3,407,610	-		CCNA_03242	0.24	+0.3
3,407,610	-		CCNA_03242	0.24	+0.3
3,407,618	-		CCNA_03242	0.24	-1.6
3,407,631	+		CCNA_03242	0.25	-1.3
3,407,639	+		CCNA_03242	0.26	-0.2
3,407,669	+		CCNA_03242	0.28	+0.4
3,407,674	+		CCNA_03242	0.28	-0.2
3,407,674	+		CCNA_03242	0.28	-1.0
3,407,692	+		CCNA_03242	0.29	+0.9
3,407,692	+		CCNA_03242	0.29	-0.4
3,407,699	+		CCNA_03242	0.30	-1.1
3,407,700	-		CCNA_03242	0.30	+0.1
3,407,705	+		CCNA_03242	0.30	-2.4
3,407,713	-		CCNA_03242	0.31	-1.1
3,407,713	-		CCNA_03242	0.31	-1.1
3,407,718	-		CCNA_03242	0.31	-0.8
3,407,718	-		CCNA_03242	0.31	+0.2
3,407,726	+		CCNA_03242	0.32	+1.8
3,407,748	-		CCNA_03242	0.33	-1.0
3,407,768	-		CCNA_03242	0.34	-0.2
3,407,830	-		CCNA_03242	0.39	+0.1
3,407,860	+		CCNA_03242	0.41	-1.0
3,407,926	+		CCNA_03242	0.45	-0.1
3,407,958	+		CCNA_03242	0.47	+0.0
3,407,958	+		CCNA_03242	0.47	+0.6
3,407,958	+		CCNA_03242	0.47	+0.5
3,407,966	-		CCNA_03242	0.48	+1.7
3,407,966	-		CCNA_03242	0.48	-1.4
3,407,966	-		CCNA_03242	0.48	+0.7
3,407,992	+		CCNA_03242	0.50	-1.8
3,408,001	-		CCNA_03242	0.50	+0.6
3,408,006	-		CCNA_03242	0.51	-0.8
3,408,018	+		CCNA_03242	0.52	+0.9
3,408,018	+		CCNA_03242	0.52	-0.5
3,408,029	+		CCNA_03242	0.52	+0.0
3,408,059	+		CCNA_03242	0.54	+0.6
3,408,061	+		CCNA_03242	0.55	-1.5
3,408,064	-		CCNA_03242	0.55	-0.9
3,408,069	-		CCNA_03242	0.55	+0.1
3,408,069	-		CCNA_03242	0.55	+1.7
3,408,157	-		CCNA_03242	0.61	-0.2
3,408,162	-		CCNA_03242	0.61	+0.6
3,408,162	-		CCNA_03242	0.61	+0.3
3,408,169	-		CCNA_03242	0.62	-0.3
3,408,195	+		CCNA_03242	0.64	+0.5
3,408,238	+		CCNA_03242	0.67	+0.4
3,408,338	+		CCNA_03242	0.74	-1.6
3,408,350	-		CCNA_03242	0.74	+1.5
3,408,353	+		CCNA_03242	0.75	-1.5
3,408,353	+		CCNA_03242	0.75	-0.0
3,408,400	-		CCNA_03242	0.78	-0.6
3,408,400	-		CCNA_03242	0.78	-0.4
3,408,407	+		CCNA_03242	0.78	-0.4
3,408,409	-		CCNA_03242	0.78	+1.1
3,408,433	-		CCNA_03242	0.80	-1.2
3,408,443	+		CCNA_03242	0.81	-0.3
3,408,443	+		CCNA_03242	0.81	-0.1
3,408,443	-		CCNA_03242	0.81	-0.5
3,408,451	-		CCNA_03242	0.81	-0.0
3,408,524	-		CCNA_03242	0.86	+0.9
3,408,524	-		CCNA_03242	0.86	-0.6
3,408,538	+		CCNA_03242	0.87	+0.8
3,408,538	+		CCNA_03242	0.87	-2.2
3,408,538	+		CCNA_03242	0.87	+0.1
3,408,546	-		CCNA_03242	0.88	-0.0
3,408,546	-		CCNA_03242	0.88	-1.0
3,408,563	+		CCNA_03242	0.89	-1.1
3,408,639	+				-2.9
3,408,647	-				+0.8
3,408,647	-				+0.1
3,408,672	-				+0.4
3,408,699	+				+0.9
3,408,699	+				-1.3
3,408,700	+				+0.7
3,408,700	+				+0.6
3,408,707	-				+0.1
3,408,708	-				-0.0
3,408,708	-				+1.5
3,408,718	+				-1.5
3,408,726	-				-1.3
3,408,726	-				-0.1
3,408,762	-				+0.1
3,408,762	-				-0.2
3,408,770	-				+0.4
3,408,778	-				-2.0
3,408,789	+				-1.9
3,408,797	-				+0.3
3,408,811	-				+1.0
3,408,821	+				+2.7
3,408,829	-				+0.1
3,408,886	-		CCNA_03243	0.11	-1.2
3,408,888	+		CCNA_03243	0.11	-0.6
3,408,888	+		CCNA_03243	0.11	-1.6
3,408,888	+		CCNA_03243	0.11	+1.4
3,408,896	-		CCNA_03243	0.12	-0.7
3,408,903	-		CCNA_03243	0.12	-0.6
3,408,923	-		CCNA_03243	0.14	+0.3
3,408,930	-		CCNA_03243	0.14	-0.5
3,408,930	-		CCNA_03243	0.14	+1.8
3,408,933	+		CCNA_03243	0.14	-0.7
3,408,933	+		CCNA_03243	0.14	+0.9
3,408,933	+		CCNA_03243	0.14	-1.7
3,408,941	-		CCNA_03243	0.15	+0.2
3,408,977	-		CCNA_03243	0.17	-0.7
3,409,013	+		CCNA_03243	0.20	-0.4
3,409,029	+		CCNA_03243	0.21	-2.4
3,409,029	+		CCNA_03243	0.21	-2.0
3,409,029	+		CCNA_03243	0.21	+0.4
3,409,029	+		CCNA_03243	0.21	-1.8
3,409,037	-		CCNA_03243	0.21	-2.0
3,409,058	-		CCNA_03243	0.23	-0.2
3,409,078	+		CCNA_03243	0.24	+0.2
3,409,097	+		CCNA_03243	0.25	-0.6
3,409,097	+		CCNA_03243	0.25	+1.0
3,409,097	+		CCNA_03243	0.25	-2.6
3,409,105	-		CCNA_03243	0.26	-1.6
3,409,105	-		CCNA_03243	0.26	-1.4
3,409,105	-		CCNA_03243	0.26	-1.7
3,409,105	-		CCNA_03243	0.26	-1.6
3,409,105	-		CCNA_03243	0.26	+1.1
3,409,130	+		CCNA_03243	0.27	-0.2
3,409,139	-		CCNA_03243	0.28	+0.9
3,409,145	+		CCNA_03243	0.28	+0.0
3,409,170	-		CCNA_03243	0.30	-1.6
3,409,170	-		CCNA_03243	0.30	-0.1
3,409,189	+		CCNA_03243	0.31	-0.5
3,409,192	-		CCNA_03243	0.31	+1.9
3,409,194	+		CCNA_03243	0.32	-0.4
3,409,197	-		CCNA_03243	0.32	-1.4
3,409,197	-		CCNA_03243	0.32	-0.4
3,409,197	-		CCNA_03243	0.32	+0.3
3,409,197	-		CCNA_03243	0.32	-0.9
3,409,199	+		CCNA_03243	0.32	+0.6
3,409,202	-		CCNA_03243	0.32	+0.9
3,409,227	+		CCNA_03243	0.34	-0.8
3,409,242	-		CCNA_03243	0.35	-0.0
3,409,243	+		CCNA_03243	0.35	-1.0
3,409,257	+		CCNA_03243	0.36	-1.9
3,409,309	+		CCNA_03243	0.39	-0.8
3,409,333	-		CCNA_03243	0.41	-2.0
3,409,333	-		CCNA_03243	0.41	+1.1
3,409,365	+		CCNA_03243	0.43	-1.0
3,409,365	+		CCNA_03243	0.43	-1.6
3,409,416	+		CCNA_03243	0.46	-0.3
3,409,418	-		CCNA_03243	0.47	+2.1
3,409,423	-		CCNA_03243	0.47	-1.2
3,409,429	+		CCNA_03243	0.47	-2.5
3,409,471	-		CCNA_03243	0.50	+0.3
3,409,491	-		CCNA_03243	0.51	+0.4
3,409,548	-		CCNA_03243	0.55	+0.6
3,409,548	-		CCNA_03243	0.55	+0.9
3,409,550	+		CCNA_03243	0.55	+0.8
3,409,611	+		CCNA_03243	0.59	+1.7
3,409,642	-		CCNA_03243	0.61	-2.6
3,409,676	-		CCNA_03243	0.64	-0.3
3,409,684	+		CCNA_03243	0.64	+0.2
3,409,684	+		CCNA_03243	0.64	-1.0
3,409,692	-		CCNA_03243	0.65	+1.8
3,409,696	+		CCNA_03243	0.65	+0.1
3,409,714	-		CCNA_03243	0.66	-3.0