Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01690

Experiment: PYE with CHIR-090 10 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_01689 and CCNA_01690 are separated by 3 nucleotidesCCNA_01690 and CCNA_01691 overlap by 1 nucleotides CCNA_01689: CCNA_01689 - inosine-5'-monophosphate dehydrogenase, at 1,815,952 to 1,817,415 _01689 CCNA_01690: CCNA_01690 - MAPEG family membrane protein, at 1,817,419 to 1,817,814 _01690 CCNA_01691: CCNA_01691 - tRNA/rRNA methyltransferase, at 1,817,814 to 1,819,091 _01691 Position (kb) 1817 1818Strain fitness (log2 ratio) -2 -1 0 1 2at 1817.389 kb on - strandat 1817.429 kb on + strandat 1817.481 kb on + strand, within CCNA_01690at 1817.699 kb on - strand, within CCNA_01690at 1817.757 kb on + strand, within CCNA_01690at 1817.791 kb on - strandat 1817.801 kb on - strandat 1817.826 kb on + strandat 1817.869 kb on - strandat 1817.961 kb on + strand, within CCNA_01691at 1818.013 kb on - strand, within CCNA_01691at 1818.163 kb on - strand, within CCNA_01691at 1818.199 kb on + strand, within CCNA_01691at 1818.260 kb on + strand, within CCNA_01691at 1818.264 kb on - strand, within CCNA_01691at 1818.287 kb on + strand, within CCNA_01691at 1818.310 kb on - strand, within CCNA_01691at 1818.327 kb on - strand, within CCNA_01691at 1818.426 kb on + strand, within CCNA_01691at 1818.437 kb on + strand, within CCNA_01691at 1818.448 kb on + strand, within CCNA_01691at 1818.514 kb on - strand, within CCNA_01691at 1818.550 kb on + strand, within CCNA_01691at 1818.620 kb on + strand, within CCNA_01691at 1818.693 kb on + strand, within CCNA_01691at 1818.693 kb on + strand, within CCNA_01691at 1818.693 kb on + strand, within CCNA_01691at 1818.701 kb on - strand, within CCNA_01691at 1818.702 kb on + strand, within CCNA_01691at 1818.740 kb on + strand, within CCNA_01691

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE with CHIR-090 10 ug/mL
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1,817,389 - -0.1
1,817,429 + +0.1
1,817,481 + CCNA_01690 0.16 +1.4
1,817,699 - CCNA_01690 0.71 +0.1
1,817,757 + CCNA_01690 0.85 +0.2
1,817,791 - +1.1
1,817,801 - +0.7
1,817,826 + +1.0
1,817,869 - -0.3
1,817,961 + CCNA_01691 0.12 -0.6
1,818,013 - CCNA_01691 0.16 -2.1
1,818,163 - CCNA_01691 0.27 +0.7
1,818,199 + CCNA_01691 0.30 -0.4
1,818,260 + CCNA_01691 0.35 -0.3
1,818,264 - CCNA_01691 0.35 -1.4
1,818,287 + CCNA_01691 0.37 -0.4
1,818,310 - CCNA_01691 0.39 -0.9
1,818,327 - CCNA_01691 0.40 -2.6
1,818,426 + CCNA_01691 0.48 +1.3
1,818,437 + CCNA_01691 0.49 +1.8
1,818,448 + CCNA_01691 0.50 +0.3
1,818,514 - CCNA_01691 0.55 +0.1
1,818,550 + CCNA_01691 0.58 -0.1
1,818,620 + CCNA_01691 0.63 +0.6
1,818,693 + CCNA_01691 0.69 +1.1
1,818,693 + CCNA_01691 0.69 -2.2
1,818,693 + CCNA_01691 0.69 +0.2
1,818,701 - CCNA_01691 0.69 +1.0
1,818,702 + CCNA_01691 0.69 +0.9
1,818,740 + CCNA_01691 0.72 -1.8

Or see this region's nucleotide sequence