Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01516

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,624,847	-		CCNA_01515	0.42	-1.0
1,624,881	+		CCNA_01515	0.44	+1.1
1,624,881	+		CCNA_01515	0.44	+0.6
1,624,889	-		CCNA_01515	0.45	-1.0
1,624,889	-		CCNA_01515	0.45	-0.7
1,624,906	-		CCNA_01515	0.46	-0.0
1,624,941	-		CCNA_01515	0.49	+1.0
1,624,950	+		CCNA_01515	0.50	-0.3
1,625,051	+		CCNA_01515	0.58	-0.5
1,625,051	+		CCNA_01515	0.58	-0.6
1,625,052	+		CCNA_01515	0.58	-0.8
1,625,052	+		CCNA_01515	0.58	-1.4
1,625,059	-		CCNA_01515	0.58	+0.8
1,625,059	-		CCNA_01515	0.58	-1.3
1,625,060	-		CCNA_01515	0.58	-0.7
1,625,061	+		CCNA_01515	0.58	-0.4
1,625,104	+		CCNA_01515	0.62	-0.3
1,625,104	-		CCNA_01515	0.62	-2.7
1,625,140	+		CCNA_01515	0.64	-0.5
1,625,198	+		CCNA_01515	0.69	+1.8
1,625,206	+		CCNA_01515	0.70	-1.0
1,625,236	-		CCNA_01515	0.72	+0.1
1,625,254	+		CCNA_01515	0.73	+0.6
1,625,262	+		CCNA_01515	0.74	+0.5
1,625,275	+		CCNA_01515	0.75	+1.4
1,625,448	-		CCNA_01515	0.89	+0.2
1,625,474	+				-1.1
1,625,474	+				-2.5
1,625,482	-				+1.2
1,625,482	-				+1.5
1,625,482	-				+0.5
1,625,482	-				-2.8
1,625,508	-				-1.4
1,625,509	-				-0.2
1,625,522	+				-0.5
1,625,560	+				-0.1
1,625,566	+				+0.0
1,625,573	-				-2.2
1,625,659	-				-0.8
1,625,660	+				+0.1
1,625,660	+				+0.7
1,625,706	+				+0.6
1,625,706	+				-2.0
1,625,719	+				+0.0
1,625,719	+				+0.5
1,625,719	+				+1.7
1,625,719	+				+0.0
1,625,719	+				+0.6
1,625,727	-				-0.4
1,625,727	-				+1.2
1,625,727	-				+0.5
1,625,727	-				-0.5
1,625,727	-				-0.7
1,625,727	-				+1.3
1,625,736	+				+0.8
1,625,744	-				+0.1
1,625,902	+		CCNA_01516	0.19	-1.0
1,625,910	-		CCNA_01516	0.21	+0.6
1,625,917	-		CCNA_01516	0.22	-0.1
1,625,929	-		CCNA_01516	0.24	+0.7
1,625,967	-		CCNA_01516	0.30	-0.9
1,625,984	+		CCNA_01516	0.32	-1.2
1,625,992	-		CCNA_01516	0.33	+0.1
1,626,004	-		CCNA_01516	0.35	+0.4
1,626,004	-		CCNA_01516	0.35	+0.2
1,626,006	+		CCNA_01516	0.36	-0.2
1,626,045	+		CCNA_01516	0.42	-1.2
1,626,120	+		CCNA_01516	0.54	-0.5
1,626,156	+		CCNA_01516	0.59	+0.3
1,626,159	-		CCNA_01516	0.60	-1.5
1,626,164	-		CCNA_01516	0.61	+0.4
1,626,175	-		CCNA_01516	0.62	+0.8
1,626,190	+		CCNA_01516	0.65	+0.7
1,626,210	-		CCNA_01516	0.68	+0.3
1,626,212	-		CCNA_01516	0.68	-0.2
1,626,212	-		CCNA_01516	0.68	-0.8
1,626,231	+		CCNA_01516	0.71	-1.8
1,626,336	+		CCNA_01516	0.88	+0.4
1,626,336	+		CCNA_01516	0.88	-0.7
1,626,336	+		CCNA_01516	0.88	-2.0
1,626,344	-		CCNA_01516	0.89	+0.1
1,626,354	+				-1.1
1,626,417	-				+0.9
1,626,431	-				+0.7
1,626,514	+				-1.3
1,626,519	+				-1.2
1,626,527	-				+1.9
1,626,527	-				-2.4
1,626,659	+		CCNA_01517	0.11	-0.4
1,626,666	+		CCNA_01517	0.11	+0.4
1,626,679	-		CCNA_01517	0.13	+2.0
1,626,736	+		CCNA_01517	0.18	+1.1
1,626,757	-		CCNA_01517	0.20	-1.5
1,626,757	-		CCNA_01517	0.20	+0.1
1,626,770	+		CCNA_01517	0.22	+1.4
1,626,793	+		CCNA_01517	0.24	-0.6
1,626,793	+		CCNA_01517	0.24	+2.4
1,626,801	-		CCNA_01517	0.25	+0.6
1,626,801	-		CCNA_01517	0.25	+0.9
1,626,811	-		CCNA_01517	0.26	-0.1
1,626,823	+		CCNA_01517	0.27	+2.2
1,626,833	-		CCNA_01517	0.28	+0.8
1,626,961	-		CCNA_01517	0.40	+0.9
1,626,966	+		CCNA_01517	0.41	+0.8
1,626,966	+		CCNA_01517	0.41	-1.0
1,627,031	+		CCNA_01517	0.47	-2.1
1,627,084	-		CCNA_01517	0.52	+0.4
1,627,132	+		CCNA_01517	0.57	-1.9
1,627,248	+		CCNA_01517	0.68	+1.3
1,627,256	-		CCNA_01517	0.69	+0.6
1,627,272	+		CCNA_01517	0.70	+1.7
1,627,292	+		CCNA_01517	0.72	-1.2
1,627,292	+		CCNA_01517	0.72	-0.5
1,627,293	+		CCNA_01517	0.72	+0.2
1,627,293	+		CCNA_01517	0.72	+1.8
1,627,293	+		CCNA_01517	0.72	-1.9
1,627,293	+		CCNA_01517	0.72	+1.2
1,627,293	+		CCNA_01517	0.72	-3.4
1,627,308	+		CCNA_01517	0.74	+0.3
1,627,360	+		CCNA_01517	0.79	-0.0
1,627,391	-		CCNA_01517	0.82	-1.6