Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01170

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,287,766	+				+0.9
1,287,766	+				-0.7
1,287,781	+				+0.5
1,287,830	+				-1.2
1,287,830	+				+0.7
1,287,870	+				+0.7
1,287,883	-				+0.5
1,287,902	-				-0.3
1,287,947	-				-0.3
1,287,961	+		CCNA_01169	0.10	+0.2
1,287,985	+		CCNA_01169	0.13	+0.7
1,288,056	+		CCNA_01169	0.22	+1.8
1,288,067	+		CCNA_01169	0.23	-0.5
1,288,067	-		CCNA_01169	0.23	-1.2
1,288,125	+		CCNA_01169	0.30	-0.4
1,288,128	-		CCNA_01169	0.31	-0.4
1,288,131	-		CCNA_01169	0.31	+0.5
1,288,208	-		CCNA_01169	0.40	-0.7
1,288,255	-		CCNA_01169	0.46	-0.2
1,288,307	+		CCNA_01169	0.53	-2.3
1,288,307	+		CCNA_01169	0.53	+0.4
1,288,309	+		CCNA_01169	0.53	-0.3
1,288,310	-		CCNA_01169	0.53	+1.0
1,288,310	-		CCNA_01169	0.53	-0.6
1,288,315	-		CCNA_01169	0.54	+0.2
1,288,315	-		CCNA_01169	0.54	-0.4
1,288,327	-		CCNA_01169	0.55	+0.3
1,288,343	+		CCNA_01169	0.57	-0.1
1,288,375	+		CCNA_01169	0.61	-1.2
1,288,424	-		CCNA_01169	0.67	+1.3
1,288,444	+		CCNA_01169	0.69	+0.8
1,288,444	+		CCNA_01169	0.69	+0.7
1,288,480	-		CCNA_01169	0.74	-1.4
1,288,509	-		CCNA_01169	0.77	+1.4
1,288,530	-		CCNA_01169	0.80	-1.2
1,288,548	+		CCNA_01169	0.82	-1.9
1,288,564	+		CCNA_01169	0.84	+0.4
1,288,582	-		CCNA_01169	0.86	-0.0
1,288,635	-				-0.1
1,288,653	+				+0.2
1,288,687	-				+0.2
1,288,708	+				+0.7
1,288,733	+				+1.6
1,288,826	-				+1.2
1,288,866	-				-3.3
1,288,866	-				+0.3
1,288,894	+				-0.7
1,288,894	+				-1.4
1,288,894	+				-0.9
1,288,894	+				+0.8
1,288,894	+				+1.0
1,288,894	+				-0.1
1,288,894	+				-2.9
1,288,894	+				-1.7
1,288,894	+				-0.6
1,288,894	+				-2.4
1,288,902	-				-0.2
1,288,902	-				-0.1
1,288,902	-				+0.9
1,288,902	-				+0.2
1,288,951	+				+0.3
1,289,034	-		CCNA_01170	0.12	-2.2
1,289,116	-		CCNA_01170	0.15	+1.5
1,289,118	+		CCNA_01170	0.15	-0.4
1,289,138	+		CCNA_01170	0.16	-0.7
1,289,139	+		CCNA_01170	0.16	-0.2
1,289,139	+		CCNA_01170	0.16	-0.2
1,289,139	+		CCNA_01170	0.16	-0.6
1,289,140	+		CCNA_01170	0.16	-1.6
1,289,147	-		CCNA_01170	0.17	-2.9
1,289,156	+		CCNA_01170	0.17	-2.3
1,289,170	+		CCNA_01170	0.17	+1.1
1,289,170	+		CCNA_01170	0.17	+0.4
1,289,178	-		CCNA_01170	0.18	+0.0
1,289,178	-		CCNA_01170	0.18	-0.4
1,289,201	+		CCNA_01170	0.19	-0.6
1,289,208	+		CCNA_01170	0.19	-1.7
1,289,216	-		CCNA_01170	0.19	+2.8
1,289,275	+		CCNA_01170	0.21	-0.3
1,289,292	-		CCNA_01170	0.22	-1.7
1,289,342	+		CCNA_01170	0.24	-0.3
1,289,342	+		CCNA_01170	0.24	-0.8
1,289,350	-		CCNA_01170	0.24	-1.2
1,289,350	-		CCNA_01170	0.24	-0.9
1,289,500	-		CCNA_01170	0.30	+0.8
1,289,524	-		CCNA_01170	0.31	-1.1
1,289,589	-		CCNA_01170	0.33	-0.3
1,289,654	+		CCNA_01170	0.36	+0.7
1,289,655	+		CCNA_01170	0.36	+0.8
1,289,664	+		CCNA_01170	0.36	-0.4
1,289,669	+		CCNA_01170	0.36	+2.2
1,289,672	-		CCNA_01170	0.36	-0.1
1,289,682	-		CCNA_01170	0.37	-0.6
1,289,697	-		CCNA_01170	0.37	+0.2
1,289,737	-		CCNA_01170	0.39	+0.4
1,289,820	-		CCNA_01170	0.42	-0.4
1,289,822	+		CCNA_01170	0.42	+0.4
1,289,833	+		CCNA_01170	0.42	-0.0
1,289,833	+		CCNA_01170	0.42	+0.4
1,289,841	-		CCNA_01170	0.43	-3.0
1,289,852	+		CCNA_01170	0.43	+0.7
1,289,853	+		CCNA_01170	0.43	-0.5
1,289,967	+		CCNA_01170	0.48	+0.5
1,289,975	-		CCNA_01170	0.48	+0.2
1,290,004	+		CCNA_01170	0.49	+0.9
1,290,004	+		CCNA_01170	0.49	+0.1
1,290,004	+		CCNA_01170	0.49	-0.3
1,290,011	-		CCNA_01170	0.49	+0.3
1,290,012	-		CCNA_01170	0.49	-0.2
1,290,012	-		CCNA_01170	0.49	+0.5
1,290,012	-		CCNA_01170	0.49	+0.2
1,290,034	+		CCNA_01170	0.50	-0.4
1,290,054	+		CCNA_01170	0.51	+1.7
1,290,059	+		CCNA_01170	0.51	+1.0
1,290,062	-		CCNA_01170	0.51	-1.2
1,290,062	-		CCNA_01170	0.51	-1.2
1,290,084	-		CCNA_01170	0.52	-0.6
1,290,107	+		CCNA_01170	0.53	-1.9
1,290,114	+		CCNA_01170	0.53	-0.1
1,290,115	-		CCNA_01170	0.53	+0.2
1,290,146	-		CCNA_01170	0.54	-2.9
1,290,148	+		CCNA_01170	0.54	-0.4
1,290,148	-		CCNA_01170	0.54	-0.4
1,290,148	-		CCNA_01170	0.54	+0.5
1,290,176	+		CCNA_01170	0.55	-0.4
1,290,184	-		CCNA_01170	0.56	+0.0
1,290,240	+		CCNA_01170	0.58	-0.4
1,290,240	+		CCNA_01170	0.58	+1.1
1,290,242	-		CCNA_01170	0.58	+0.4
1,290,248	-		CCNA_01170	0.58	-2.1
1,290,248	-		CCNA_01170	0.58	+1.0
1,290,248	-		CCNA_01170	0.58	-2.3
1,290,255	+		CCNA_01170	0.58	-0.3
1,290,408	+		CCNA_01170	0.64	+0.3
1,290,411	-		CCNA_01170	0.64	-2.7
1,290,416	-		CCNA_01170	0.64	+0.3
1,290,421	-		CCNA_01170	0.65	+0.2
1,290,421	-		CCNA_01170	0.65	-1.9
1,290,421	-		CCNA_01170	0.65	+1.0
1,290,450	+		CCNA_01170	0.66	+0.4
1,290,450	+		CCNA_01170	0.66	-1.2
1,290,454	-		CCNA_01170	0.66	+0.7
1,290,458	-		CCNA_01170	0.66	-1.1
1,290,472	+		CCNA_01170	0.67	+1.2
1,290,472	+		CCNA_01170	0.67	-1.3
1,290,482	+		CCNA_01170	0.67	-1.3
1,290,495	-		CCNA_01170	0.67	-1.0
1,290,540	-		CCNA_01170	0.69	+0.3
1,290,550	+		CCNA_01170	0.70	+0.2
1,290,558	-		CCNA_01170	0.70	+0.2
1,290,579	+		CCNA_01170	0.71	+2.4
1,290,671	-		CCNA_01170	0.74	+1.1
1,290,875	+		CCNA_01170	0.82	-0.3
1,290,897	-		CCNA_01170	0.83	+0.3
1,290,930	-		CCNA_01170	0.84	+0.2
1,290,939	-		CCNA_01170	0.84	+0.7
1,290,975	+		CCNA_01170	0.86	+1.6
1,290,975	+		CCNA_01170	0.86	-0.2
1,290,975	+		CCNA_01170	0.86	+0.4
1,290,975	+		CCNA_01170	0.86	-1.1
1,290,975	+		CCNA_01170	0.86	+0.9
1,290,983	-		CCNA_01170	0.86	+1.2
1,290,983	-		CCNA_01170	0.86	+0.5
1,290,983	-		CCNA_01170	0.86	-0.5
1,290,983	-		CCNA_01170	0.86	+1.0
1,290,983	-		CCNA_01170	0.86	-1.6
1,290,983	-		CCNA_01170	0.86	+0.2
1,291,069	-		CCNA_01170	0.89	+0.7
1,291,115	+				+0.9
1,291,125	+				-0.8
1,291,158	+				+0.1
1,291,158	+				-2.8
1,291,188	-				-0.4
1,291,201	-				+0.5
1,291,214	+				+0.7
1,291,261	+				+0.4
1,291,269	-				-0.7
1,291,274	-				+0.2
1,291,279	-				-1.1
1,291,279	-				-0.3
1,291,279	-				+0.9
1,291,297	+				+0.7
1,291,303	+				-0.6
1,291,303	+				+0.1
1,291,311	-				+0.2
1,291,311	-				+1.5
1,291,358	-				+0.4
1,291,403	+				-2.7
1,291,488	+				+0.0
1,291,488	+				-1.5
1,291,489	+				-0.7
1,291,496	-				+1.3
1,291,496	-				+0.2
1,291,496	-				+0.2
1,291,598	-				+1.4
1,291,794	+		CCNA_01171	0.12	+0.2
1,291,803	+		CCNA_01171	0.15	-1.4
1,291,850	+		CCNA_01171	0.29	+0.7
1,291,895	+		CCNA_01171	0.42	-1.0
1,291,922	-		CCNA_01171	0.50	-1.9
1,291,960	-		CCNA_01171	0.61	-2.7
1,291,990	+		CCNA_01171	0.70	-0.9
1,291,990	+		CCNA_01171	0.70	+0.0
1,291,998	-		CCNA_01171	0.72	-1.0
1,291,998	-		CCNA_01171	0.72	-0.4
1,292,020	+		CCNA_01171	0.79	+0.3
1,292,020	+		CCNA_01171	0.79	-0.7
1,292,020	+		CCNA_01171	0.79	+0.2
1,292,020	+		CCNA_01171	0.79	-0.5
1,292,020	+		CCNA_01171	0.79	+0.6
1,292,020	+		CCNA_01171	0.79	+1.2
1,292,020	+		CCNA_01171	0.79	+0.7
1,292,020	+		CCNA_01171	0.79	-0.2
1,292,020	+		CCNA_01171	0.79	-0.2
1,292,020	+		CCNA_01171	0.79	+0.7
1,292,020	+		CCNA_01171	0.79	+0.8
1,292,028	-		CCNA_01171	0.81	-0.3
1,292,028	-		CCNA_01171	0.81	+0.4
1,292,028	-		CCNA_01171	0.81	+1.1
1,292,028	-		CCNA_01171	0.81	+0.7
1,292,028	-		CCNA_01171	0.81	-0.2
1,292,028	-		CCNA_01171	0.81	-0.5
1,292,028	-		CCNA_01171	0.81	-0.5
1,292,028	-		CCNA_01171	0.81	+0.1
1,292,028	-		CCNA_01171	0.81	+0.0
1,292,035	+		CCNA_01171	0.83	-1.4
1,292,087	+				-0.8
1,292,142	+				-0.5
1,292,150	-				-0.1
1,292,150	-				-3.1
1,292,181	+				+1.5
1,292,181	+				-0.1
1,292,199	+				+0.9
1,292,199	+				-0.4
1,292,202	-				+0.0
1,292,207	-				-1.0
1,292,212	+				+0.8
1,292,212	+				+1.0
1,292,212	+				-0.5
1,292,212	+				-1.6
1,292,212	+				+0.9
1,292,220	-				-1.8
1,292,220	-				+0.9
1,292,220	-				-0.3
1,292,220	-				-0.2
1,292,220	-				-2.1
1,292,352	+		CCNA_01172	0.18	+0.7