Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01069

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,173,304	+		CCNA_01068	0.36	+0.2
1,173,304	+		CCNA_01068	0.36	-0.2
1,173,304	+		CCNA_01068	0.36	-0.1
1,173,338	+		CCNA_01068	0.39	+1.1
1,173,338	+		CCNA_01068	0.39	+0.4
1,173,346	-		CCNA_01068	0.39	-2.3
1,173,371	+		CCNA_01068	0.41	-1.1
1,173,379	-		CCNA_01068	0.42	-0.7
1,173,464	+		CCNA_01068	0.48	+1.0
1,173,464	+		CCNA_01068	0.48	-0.7
1,173,464	+		CCNA_01068	0.48	+1.0
1,173,497	+		CCNA_01068	0.51	+1.1
1,173,505	-		CCNA_01068	0.51	-0.9
1,173,523	+		CCNA_01068	0.53	+0.1
1,173,523	+		CCNA_01068	0.53	+0.4
1,173,524	+		CCNA_01068	0.53	-0.1
1,173,530	+		CCNA_01068	0.53	-1.7
1,173,530	+		CCNA_01068	0.53	+1.4
1,173,576	+		CCNA_01068	0.57	+0.7
1,173,576	+		CCNA_01068	0.57	+2.8
1,173,594	-		CCNA_01068	0.58	+1.7
1,173,613	-		CCNA_01068	0.60	+1.2
1,173,727	-		CCNA_01068	0.69	-0.3
1,173,789	+		CCNA_01068	0.73	-2.2
1,173,821	+		CCNA_01068	0.76	-1.8
1,173,836	+		CCNA_01068	0.77	-0.3
1,173,844	-		CCNA_01068	0.78	+0.4
1,173,851	+		CCNA_01068	0.78	+0.3
1,173,851	+		CCNA_01068	0.78	-1.0
1,173,859	-		CCNA_01068	0.79	+1.8
1,173,891	+		CCNA_01068	0.81	+2.0
1,173,899	-		CCNA_01068	0.82	-0.2
1,173,909	-		CCNA_01068	0.83	+1.4
1,173,936	+		CCNA_01068	0.85	-2.7
1,173,940	+		CCNA_01068	0.85	+0.3
1,174,005	-				+0.6
1,174,021	+				-0.0
1,174,029	-				-1.1
1,174,029	-				+1.3
1,174,108	+				+0.1
1,174,108	+				-1.7
1,174,118	+				+0.4
1,174,134	-				+0.9
1,174,173	+				-0.7
1,174,192	+				-0.6
1,174,192	+				-2.5
1,174,200	-				-1.7
1,174,200	-				+1.0
1,174,205	-				-0.9
1,174,215	-				-0.7
1,174,293	+				-0.0
1,174,347	-				-0.0
1,174,379	+				-0.3
1,174,379	+				+0.6
1,174,424	+				+0.5
1,174,429	+				-0.3
1,174,439	+		CCNA_01069	0.10	+0.4
1,174,462	+		CCNA_01069	0.12	-0.6
1,174,467	+		CCNA_01069	0.12	+1.3
1,174,472	+		CCNA_01069	0.12	+0.1
1,174,472	+		CCNA_01069	0.12	-0.0
1,174,495	-		CCNA_01069	0.14	-0.9
1,174,507	-		CCNA_01069	0.15	-1.8
1,174,556	+		CCNA_01069	0.18	-0.5
1,174,556	+		CCNA_01069	0.18	+1.0
1,174,556	+		CCNA_01069	0.18	+0.3
1,174,556	+		CCNA_01069	0.18	-1.1
1,174,562	+		CCNA_01069	0.18	-0.4
1,174,564	-		CCNA_01069	0.18	-0.3
1,174,564	-		CCNA_01069	0.18	+0.0
1,174,577	-		CCNA_01069	0.19	-0.6
1,174,640	-		CCNA_01069	0.23	-3.3
1,174,646	-		CCNA_01069	0.24	-1.4
1,174,684	-		CCNA_01069	0.26	-0.6
1,174,724	-		CCNA_01069	0.29	+0.4
1,174,725	+		CCNA_01069	0.29	-0.3
1,174,726	+		CCNA_01069	0.29	+0.1
1,174,737	+		CCNA_01069	0.29	+0.2
1,174,737	+		CCNA_01069	0.29	-0.8
1,174,737	+		CCNA_01069	0.29	+0.3
1,174,737	+		CCNA_01069	0.29	+0.1
1,174,793	+		CCNA_01069	0.33	+0.0
1,174,804	+		CCNA_01069	0.34	-0.8
1,174,832	-		CCNA_01069	0.36	-0.2
1,174,839	+		CCNA_01069	0.36	+1.7
1,174,889	+		CCNA_01069	0.39	-3.0
1,174,905	+		CCNA_01069	0.40	+0.5
1,174,920	-		CCNA_01069	0.41	+0.3
1,174,930	-		CCNA_01069	0.42	-1.9
1,174,934	+		CCNA_01069	0.42	-0.0
1,174,959	+		CCNA_01069	0.44	-1.5
1,174,969	-		CCNA_01069	0.45	+1.5
1,175,003	-		CCNA_01069	0.47	-2.3
1,175,049	-		CCNA_01069	0.50	-0.6
1,175,051	-		CCNA_01069	0.50	-0.4
1,175,060	+		CCNA_01069	0.51	+2.3
1,175,094	+		CCNA_01069	0.53	-0.0
1,175,102	-		CCNA_01069	0.53	+1.1
1,175,118	-		CCNA_01069	0.54	-1.3
1,175,126	+		CCNA_01069	0.55	+0.8
1,175,173	+		CCNA_01069	0.58	+0.6
1,175,206	+		CCNA_01069	0.60	-0.2
1,175,206	+		CCNA_01069	0.60	+0.4
1,175,206	+		CCNA_01069	0.60	+0.7
1,175,206	+		CCNA_01069	0.60	-0.2
1,175,206	+		CCNA_01069	0.60	+0.3
1,175,206	+		CCNA_01069	0.60	+0.6
1,175,214	-		CCNA_01069	0.61	+0.7
1,175,214	-		CCNA_01069	0.61	+0.2
1,175,214	-		CCNA_01069	0.61	-1.0
1,175,243	+		CCNA_01069	0.62	+0.4
1,175,408	-		CCNA_01069	0.73	+0.2
1,175,417	+		CCNA_01069	0.74	-0.4
1,175,420	-		CCNA_01069	0.74	-1.0
1,175,425	-		CCNA_01069	0.74	+0.5
1,175,427	+		CCNA_01069	0.74	+0.3
1,175,446	+		CCNA_01069	0.76	+2.7
1,175,493	+		CCNA_01069	0.79	+0.4
1,175,499	-		CCNA_01069	0.79	+0.1
1,175,500	-		CCNA_01069	0.79	-1.1
1,175,519	-		CCNA_01069	0.80	-0.5
1,175,629	+		CCNA_01069	0.88	+0.2
1,175,652	+		CCNA_01069	0.89	-0.6
1,175,652	+		CCNA_01069	0.89	+0.4
1,175,660	-		CCNA_01069	0.90	-0.6
1,175,674	+				-0.4
1,175,735	-				+2.0
1,175,790	+				+0.6
1,176,089	+				+0.2
1,176,152	+				-0.0
1,176,160	-				-0.9
1,176,236	+				+0.7
1,176,238	-				-0.1
1,176,279	+				-0.6
1,176,343	-				-2.4
1,176,387	-				+0.3
1,176,480	+				-0.0
1,176,544	+				+0.3
1,176,544	+				-1.0
1,176,549	+				-0.9
1,176,549	+				+0.6
1,176,549	+				+1.0
1,176,549	+				-1.0
1,176,549	+				+1.0
1,176,552	-				-0.9
1,176,552	-				-0.5
1,176,557	-				+1.1
1,176,557	-				-0.1
1,176,557	-				+0.2
1,176,557	-				+0.2
1,176,557	-				+1.9
1,176,557	-				+0.7
1,176,562	-				+1.7
1,176,619	+		CCNA_01070	0.15	-0.1
1,176,646	-		CCNA_01070	0.18	-0.6
1,176,658	+		CCNA_01070	0.20	+0.8
1,176,685	-		CCNA_01070	0.24	-0.2
1,176,725	+		CCNA_01070	0.29	-0.2
1,176,779	-		CCNA_01070	0.36	-0.0
1,176,801	-		CCNA_01070	0.39	+0.8