Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_00982

Experiment: PYE with CHIR-090 10 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 10 ug/mL
1,060,633	+				-1.1
1,060,673	+		CCNA_00981	0.11	-0.1
1,060,679	+		CCNA_00981	0.12	+0.0
1,060,679	+		CCNA_00981	0.12	-1.4
1,060,679	+		CCNA_00981	0.12	-0.0
1,060,687	-		CCNA_00981	0.13	+0.5
1,060,687	-		CCNA_00981	0.13	-1.1
1,060,687	-		CCNA_00981	0.13	-2.6
1,060,687	-		CCNA_00981	0.13	-1.7
1,060,687	-		CCNA_00981	0.13	-1.6
1,060,695	+		CCNA_00981	0.14	-1.0
1,060,697	-		CCNA_00981	0.14	-3.5
1,060,736	+		CCNA_00981	0.20	+1.3
1,060,744	-		CCNA_00981	0.21	-0.9
1,060,821	+		CCNA_00981	0.32	+0.2
1,060,875	+		CCNA_00981	0.39	+0.7
1,060,989	-		CCNA_00981	0.56	-0.6
1,061,031	+		CCNA_00981	0.62	+0.0
1,061,031	+		CCNA_00981	0.62	-0.1
1,061,031	+		CCNA_00981	0.62	+1.0
1,061,039	-		CCNA_00981	0.63	-1.9
1,061,039	-		CCNA_00981	0.63	+0.4
1,061,039	-		CCNA_00981	0.63	-0.9
1,061,042	+		CCNA_00981	0.63	-0.6
1,061,042	+		CCNA_00981	0.63	-0.0
1,061,050	-		CCNA_00981	0.64	-0.1
1,061,050	-		CCNA_00981	0.64	+0.6
1,061,074	+		CCNA_00981	0.68	-0.9
1,061,079	+		CCNA_00981	0.68	-0.6
1,061,089	+		CCNA_00981	0.70	+0.1
1,061,171	+		CCNA_00981	0.81	+0.3
1,061,171	+		CCNA_00981	0.81	+0.1
1,061,171	+		CCNA_00981	0.81	-1.6
1,061,179	-		CCNA_00981	0.83	-1.8
1,061,179	-		CCNA_00981	0.83	-0.5
1,061,191	+		CCNA_00981	0.84	-1.1
1,061,196	+		CCNA_00981	0.85	-1.0
1,061,214	+		CCNA_00981	0.88	-1.5
1,061,237	-				+0.7
1,061,253	-				+2.3
1,061,259	-				-1.0
1,061,349	-				+0.4
1,061,370	+				+0.7
1,061,434	-				+1.7
1,061,511	-				-1.4
1,061,600	-				-0.3
1,061,636	-				-0.8
1,061,712	+		CCNA_00982	0.21	+0.2
1,061,717	+		CCNA_00982	0.22	-0.5
1,061,717	+		CCNA_00982	0.22	-0.5
1,061,736	+		CCNA_00982	0.27	+0.0
1,061,741	+		CCNA_00982	0.28	+0.7
1,061,746	+		CCNA_00982	0.29	+1.3
1,061,746	+		CCNA_00982	0.29	+0.4
1,061,754	-		CCNA_00982	0.31	+1.6
1,061,791	-		CCNA_00982	0.39	-0.2
1,061,791	-		CCNA_00982	0.39	-1.7
1,061,796	-		CCNA_00982	0.41	-1.5
1,061,799	+		CCNA_00982	0.41	+0.0
1,061,799	+		CCNA_00982	0.41	-0.5
1,061,839	+		CCNA_00982	0.51	+0.3
1,061,842	-		CCNA_00982	0.51	-0.5
1,061,891	+		CCNA_00982	0.63	+2.0
1,061,901	-		CCNA_00982	0.65	-3.4
1,061,904	+		CCNA_00982	0.66	-0.0
1,061,909	+		CCNA_00982	0.67	-0.3
1,061,923	-		CCNA_00982	0.70	+0.4
1,061,928	-		CCNA_00982	0.71	-0.8
1,061,930	+		CCNA_00982	0.72	+1.1
1,061,985	+		CCNA_00982	0.85	-0.1
1,061,992	+		CCNA_00982	0.86	+0.3
1,061,998	+		CCNA_00982	0.88	+1.6
1,062,002	+		CCNA_00982	0.89	+0.3
1,062,006	-		CCNA_00982	0.90	+0.8
1,062,020	+				+1.6
1,062,039	+				-1.5
1,062,047	-				-0.6
1,062,079	-				-1.9
1,062,109	+				+1.7
1,062,153	+				-0.0
1,062,153	+				-1.5
1,062,153	+				-0.5
1,062,156	-				+0.0
1,062,161	-				-0.5
1,062,161	-				+0.3
1,062,196	-				-0.1
1,062,208	+				-0.1
1,062,213	+				+0.7
1,062,259	+				-0.3
1,062,267	-				+1.0
1,062,320	-				+0.4
1,062,320	-				-0.7
1,062,344	-				-0.2
1,062,393	+		CCNA_00983	0.12	+0.0
1,062,401	-		CCNA_00983	0.13	+0.4
1,062,403	-		CCNA_00983	0.13	+0.8
1,062,403	-		CCNA_00983	0.13	+1.8
1,062,408	+		CCNA_00983	0.13	-0.2
1,062,440	+		CCNA_00983	0.15	-0.0
1,062,442	+		CCNA_00983	0.15	-2.6
1,062,450	+		CCNA_00983	0.15	+0.0
1,062,450	+		CCNA_00983	0.15	+1.8
1,062,690	+		CCNA_00983	0.29	-0.4
1,062,717	-		CCNA_00983	0.30	+0.2
1,062,758	+		CCNA_00983	0.32	-1.1
1,062,759	+		CCNA_00983	0.32	-2.0
1,062,759	+		CCNA_00983	0.32	-0.9
1,062,759	+		CCNA_00983	0.32	-0.6
1,062,759	+		CCNA_00983	0.32	+0.2
1,062,759	+		CCNA_00983	0.32	-0.7
1,062,767	-		CCNA_00983	0.33	+0.0
1,062,767	-		CCNA_00983	0.33	+1.2
1,062,881	+		CCNA_00983	0.39	-0.6
1,062,882	+		CCNA_00983	0.39	+1.0
1,062,882	+		CCNA_00983	0.39	+0.2
1,062,890	-		CCNA_00983	0.40	+0.9
1,062,897	+		CCNA_00983	0.40	-0.2
1,062,905	-		CCNA_00983	0.40	-0.9
1,062,905	-		CCNA_00983	0.40	-0.4
1,062,905	-		CCNA_00983	0.40	+0.2
1,062,970	-		CCNA_00983	0.44	+0.2
1,063,027	+		CCNA_00983	0.47	+0.2
1,063,050	+		CCNA_00983	0.48	-1.7