Strain Fitness in Escherichia coli BW25113 around b4032

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntxylE and malG are separated by 371 nucleotidesmalG and malF are separated by 14 nucleotides b4031: xylE - D-xylose transporter (NCBI), at 4,238,802 to 4,240,277 xylE b4032: malG - maltose transporter subunit (NCBI), at 4,240,649 to 4,241,539 malG b4033: malF - maltose transporter subunit (NCBI), at 4,241,554 to 4,243,098 malF Position (kb) 4240 4241 4242Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4239.652 kb on + strand, within xylEat 4239.652 kb on + strand, within xylEat 4239.652 kb on - strand, within xylEat 4239.652 kb on - strand, within xylEat 4239.655 kb on - strand, within xylEat 4239.655 kb on - strand, within xylEat 4239.655 kb on - strand, within xylEat 4239.655 kb on - strand, within xylEat 4239.678 kb on + strand, within xylEat 4239.678 kb on + strand, within xylEat 4239.686 kb on + strand, within xylEat 4239.686 kb on + strand, within xylEat 4239.686 kb on + strand, within xylEat 4239.686 kb on + strand, within xylEat 4239.688 kb on + strand, within xylEat 4239.713 kb on - strand, within xylEat 4239.781 kb on + strand, within xylEat 4239.800 kb on + strand, within xylEat 4239.801 kb on + strand, within xylEat 4239.801 kb on + strand, within xylEat 4239.801 kb on + strand, within xylEat 4239.801 kb on + strand, within xylEat 4239.809 kb on - strand, within xylEat 4239.810 kb on - strand, within xylEat 4239.813 kb on + strand, within xylEat 4239.813 kb on + strand, within xylEat 4239.821 kb on - strand, within xylEat 4239.823 kb on + strand, within xylEat 4239.823 kb on + strand, within xylEat 4239.823 kb on + strand, within xylEat 4239.823 kb on + strand, within xylEat 4239.826 kb on + strand, within xylEat 4239.826 kb on + strand, within xylEat 4239.826 kb on + strand, within xylEat 4239.832 kb on - strand, within xylEat 4239.834 kb on - strand, within xylEat 4239.835 kb on + strand, within xylEat 4239.838 kb on - strand, within xylEat 4239.849 kb on + strand, within xylEat 4239.854 kb on + strand, within xylEat 4239.855 kb on + strand, within xylEat 4239.855 kb on + strand, within xylEat 4239.855 kb on + strandat 4239.855 kb on + strand, within xylEat 4239.855 kb on + strand, within xylEat 4239.863 kb on - strand, within xylEat 4239.863 kb on - strand, within xylEat 4239.875 kb on - strand, within xylEat 4239.907 kb on + strand, within xylEat 4239.907 kb on - strand, within xylEat 4239.907 kb on - strand, within xylEat 4239.921 kb on - strand, within xylEat 4239.921 kb on - strand, within xylEat 4239.922 kb on - strand, within xylEat 4239.922 kb on - strand, within xylEat 4239.922 kb on - strand, within xylEat 4239.922 kb on - strand, within xylEat 4239.923 kb on + strand, within xylEat 4239.930 kb on - strand, within xylEat 4239.931 kb on - strand, within xylEat 4239.933 kb on + strand, within xylEat 4239.933 kb on - strand, within xylEat 4239.936 kb on - strand, within xylEat 4239.936 kb on - strand, within xylEat 4239.936 kb on - strand, within xylEat 4239.955 kb on - strand, within xylEat 4239.969 kb on + strand, within xylEat 4239.969 kb on + strand, within xylEat 4239.969 kb on + strand, within xylEat 4239.969 kb on + strand, within xylEat 4239.969 kb on + strand, within xylEat 4239.974 kb on + strand, within xylEat 4239.982 kb on - strand, within xylEat 4240.014 kb on - strand, within xylEat 4240.019 kb on + strand, within xylEat 4240.032 kb on - strand, within xylEat 4240.042 kb on + strand, within xylEat 4240.042 kb on + strand, within xylEat 4240.044 kb on + strand, within xylEat 4240.052 kb on - strand, within xylEat 4240.052 kb on - strand, within xylEat 4240.059 kb on - strand, within xylEat 4240.063 kb on + strand, within xylEat 4240.071 kb on - strand, within xylEat 4240.074 kb on - strand, within xylEat 4240.082 kb on + strand, within xylEat 4240.151 kb on + strandat 4240.151 kb on + strandat 4240.158 kb on + strandat 4240.159 kb on + strandat 4240.159 kb on + strandat 4240.170 kb on + strandat 4240.172 kb on + strandat 4240.177 kb on - strandat 4240.197 kb on + strandat 4240.197 kb on + strandat 4240.258 kb on + strandat 4240.271 kb on + strandat 4240.275 kb on + strandat 4240.275 kb on + strandat 4240.275 kb on + strandat 4240.286 kb on + strandat 4240.286 kb on + strandat 4240.294 kb on - strandat 4240.294 kb on - strandat 4240.294 kb on - strandat 4240.294 kb on - strandat 4240.305 kb on + strandat 4240.305 kb on + strandat 4240.320 kb on + strandat 4240.444 kb on + strandat 4240.444 kb on + strandat 4240.575 kb on - strandat 4240.581 kb on + strandat 4240.585 kb on - strandat 4240.587 kb on - strandat 4240.599 kb on - strandat 4240.609 kb on + strandat 4240.617 kb on - strandat 4240.617 kb on - strandat 4240.617 kb on - strandat 4240.623 kb on - strandat 4240.631 kb on - strandat 4240.631 kb on - strandat 4240.641 kb on - strandat 4240.703 kb on + strandat 4240.711 kb on - strandat 4240.721 kb on - strandat 4240.721 kb on - strandat 4240.729 kb on - strandat 4240.807 kb on + strand, within malGat 4240.807 kb on + strand, within malGat 4240.809 kb on + strand, within malGat 4240.817 kb on - strand, within malGat 4240.817 kb on - strand, within malGat 4240.924 kb on - strandat 4240.971 kb on - strand, within malGat 4240.971 kb on - strand, within malGat 4241.068 kb on - strand, within malGat 4241.095 kb on + strand, within malGat 4241.103 kb on - strand, within malGat 4241.103 kb on - strand, within malGat 4241.150 kb on - strand, within malGat 4241.227 kb on - strand, within malGat 4241.227 kb on - strand, within malGat 4241.300 kb on - strand, within malGat 4241.321 kb on - strand, within malGat 4241.325 kb on + strand, within malGat 4241.333 kb on - strand, within malGat 4241.425 kb on + strand, within malGat 4241.428 kb on + strand, within malGat 4241.428 kb on + strand, within malGat 4241.439 kb on + strand, within malGat 4241.447 kb on - strand, within malGat 4241.708 kb on + strandat 4241.716 kb on - strand, within malFat 4241.816 kb on + strand, within malFat 4241.844 kb on - strand, within malFat 4241.844 kb on - strand, within malFat 4241.881 kb on + strand, within malFat 4241.881 kb on + strand, within malFat 4241.883 kb on + strand, within malFat 4241.889 kb on - strand, within malFat 4241.889 kb on - strand, within malFat 4241.918 kb on + strand, within malFat 4241.953 kb on - strand, within malFat 4241.986 kb on - strand, within malFat 4241.986 kb on - strand, within malFat 4242.010 kb on + strand, within malFat 4242.016 kb on - strand, within malFat 4242.044 kb on + strand, within malFat 4242.120 kb on - strand, within malFat 4242.120 kb on - strand, within malFat 4242.135 kb on - strand, within malFat 4242.135 kb on - strand, within malFat 4242.180 kb on + strand, within malFat 4242.198 kb on - strand, within malFat 4242.198 kb on - strand, within malFat 4242.198 kb on - strand, within malFat 4242.198 kb on - strand, within malFat 4242.241 kb on + strand, within malFat 4242.338 kb on - strand, within malFat 4242.338 kb on - strand, within malFat 4242.362 kb on + strand, within malFat 4242.385 kb on - strand, within malFat 4242.432 kb on + strand, within malFat 4242.434 kb on - strand, within malFat 4242.438 kb on - strand, within malFat 4242.455 kb on - strand, within malFat 4242.472 kb on - strand, within malFat 4242.472 kb on - strand, within malFat 4242.472 kb on - strand, within malFat 4242.515 kb on - strand, within malF

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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4,239,652 + xylE b4031 0.58 +0.5
4,239,652 + xylE b4031 0.58 -0.1
4,239,652 - xylE b4031 0.58 +0.3
4,239,652 - xylE b4031 0.58 +0.7
4,239,655 - xylE b4031 0.58 +0.6
4,239,655 - xylE b4031 0.58 +0.3
4,239,655 - xylE b4031 0.58 -0.2
4,239,655 - xylE b4031 0.58 -0.8
4,239,678 + xylE b4031 0.59 +0.4
4,239,678 + xylE b4031 0.59 -0.3
4,239,686 + xylE b4031 0.60 -0.2
4,239,686 + xylE b4031 0.60 +0.7
4,239,686 + xylE b4031 0.60 +0.7
4,239,686 + xylE b4031 0.60 +1.1
4,239,688 + xylE b4031 0.60 +0.2
4,239,713 - xylE b4031 0.62 +0.1
4,239,781 + xylE b4031 0.66 +1.6
4,239,800 + xylE b4031 0.68 -0.2
4,239,801 + xylE b4031 0.68 -0.2
4,239,801 + xylE b4031 0.68 -0.4
4,239,801 + xylE b4031 0.68 -0.7
4,239,801 + xylE b4031 0.68 +1.2
4,239,809 - xylE b4031 0.68 +0.0
4,239,810 - xylE b4031 0.68 +0.9
4,239,813 + xylE b4031 0.68 +1.5
4,239,813 + xylE b4031 0.68 +0.1
4,239,821 - xylE b4031 0.69 -0.5
4,239,823 + xylE b4031 0.69 +1.2
4,239,823 + xylE b4031 0.69 -0.9
4,239,823 + xylE b4031 0.69 +0.4
4,239,823 + xylE b4031 0.69 +0.0
4,239,826 + xylE b4031 0.69 -0.5
4,239,826 + xylE b4031 0.69 +0.1
4,239,826 + xylE b4031 0.69 +0.5
4,239,832 - xylE b4031 0.70 -1.3
4,239,834 - xylE b4031 0.70 -1.1
4,239,835 + xylE b4031 0.70 -0.4
4,239,838 - xylE b4031 0.70 -1.3
4,239,849 + xylE b4031 0.71 +1.4
4,239,854 + xylE b4031 0.71 -0.9
4,239,855 + xylE b4031 0.71 +0.4
4,239,855 + xylE b4031 0.71 +0.9
4,239,855 + +0.6
4,239,855 + xylE b4031 0.71 -0.6
4,239,855 + xylE b4031 0.71 +0.6
4,239,863 - xylE b4031 0.72 +0.0
4,239,863 - xylE b4031 0.72 -1.0
4,239,875 - xylE b4031 0.73 +0.5
4,239,907 + xylE b4031 0.75 +0.6
4,239,907 - xylE b4031 0.75 -0.4
4,239,907 - xylE b4031 0.75 +0.4
4,239,921 - xylE b4031 0.76 -0.1
4,239,921 - xylE b4031 0.76 +0.6
4,239,922 - xylE b4031 0.76 -1.3
4,239,922 - xylE b4031 0.76 -0.6
4,239,922 - xylE b4031 0.76 +1.8
4,239,922 - xylE b4031 0.76 +0.9
4,239,923 + xylE b4031 0.76 -0.5
4,239,930 - xylE b4031 0.76 +0.2
4,239,931 - xylE b4031 0.76 -1.1
4,239,933 + xylE b4031 0.77 +0.2
4,239,933 - xylE b4031 0.77 -0.2
4,239,936 - xylE b4031 0.77 +0.8
4,239,936 - xylE b4031 0.77 +0.6
4,239,936 - xylE b4031 0.77 -0.6
4,239,955 - xylE b4031 0.78 -0.4
4,239,969 + xylE b4031 0.79 -0.3
4,239,969 + xylE b4031 0.79 -0.4
4,239,969 + xylE b4031 0.79 -0.7
4,239,969 + xylE b4031 0.79 +0.4
4,239,969 + xylE b4031 0.79 +0.9
4,239,974 + xylE b4031 0.79 -0.5
4,239,982 - xylE b4031 0.80 -1.2
4,240,014 - xylE b4031 0.82 +0.8
4,240,019 + xylE b4031 0.82 +0.2
4,240,032 - xylE b4031 0.83 -0.3
4,240,042 + xylE b4031 0.84 +0.2
4,240,042 + xylE b4031 0.84 -0.9
4,240,044 + xylE b4031 0.84 +0.2
4,240,052 - xylE b4031 0.85 +0.2
4,240,052 - xylE b4031 0.85 +1.1
4,240,059 - xylE b4031 0.85 +0.7
4,240,063 + xylE b4031 0.85 -0.9
4,240,071 - xylE b4031 0.86 -0.6
4,240,074 - xylE b4031 0.86 -0.0
4,240,082 + xylE b4031 0.87 -0.3
4,240,151 + -0.6
4,240,151 + +0.0
4,240,158 + -0.5
4,240,159 + +0.9
4,240,159 + +0.0
4,240,170 + +0.7
4,240,172 + -0.3
4,240,177 - +0.2
4,240,197 + -0.5
4,240,197 + +0.5
4,240,258 + -1.3
4,240,271 + -1.1
4,240,275 + -0.3
4,240,275 + -0.2
4,240,275 + +0.6
4,240,286 + -1.2
4,240,286 + +0.3
4,240,294 - +0.1
4,240,294 - -0.0
4,240,294 - +0.1
4,240,294 - -0.1
4,240,305 + -0.8
4,240,305 + +0.2
4,240,320 + -0.1
4,240,444 + +0.7
4,240,444 + -0.3
4,240,575 - +0.2
4,240,581 + -0.8
4,240,585 - -1.9
4,240,587 - -0.0
4,240,599 - -0.2
4,240,609 + -0.6
4,240,617 - +0.2
4,240,617 - +0.2
4,240,617 - +0.6
4,240,623 - +0.2
4,240,631 - +1.6
4,240,631 - +0.8
4,240,641 - -0.2
4,240,703 + -0.6
4,240,711 - -3.2
4,240,721 - -0.9
4,240,721 - -0.7
4,240,729 - -1.7
4,240,807 + malG b4032 0.18 -2.2
4,240,807 + malG b4032 0.18 -1.4
4,240,809 + malG b4032 0.18 -2.1
4,240,817 - malG b4032 0.19 -1.4
4,240,817 - malG b4032 0.19 -1.4
4,240,924 - +0.6
4,240,971 - malG b4032 0.36 -1.5
4,240,971 - malG b4032 0.36 -1.6
4,241,068 - malG b4032 0.47 -3.6
4,241,095 + malG b4032 0.50 -2.1
4,241,103 - malG b4032 0.51 -1.2
4,241,103 - malG b4032 0.51 -1.2
4,241,150 - malG b4032 0.56 -2.2
4,241,227 - malG b4032 0.65 -3.1
4,241,227 - malG b4032 0.65 -1.1
4,241,300 - malG b4032 0.73 -4.7
4,241,321 - malG b4032 0.75 -2.6
4,241,325 + malG b4032 0.76 -1.5
4,241,333 - malG b4032 0.77 -2.3
4,241,425 + malG b4032 0.87 -2.3
4,241,428 + malG b4032 0.87 -3.8
4,241,428 + malG b4032 0.87 -1.8
4,241,439 + malG b4032 0.89 -1.9
4,241,447 - malG b4032 0.90 -1.2
4,241,708 + -2.4
4,241,716 - malF b4033 0.10 -2.1
4,241,816 + malF b4033 0.17 -2.5
4,241,844 - malF b4033 0.19 -1.9
4,241,844 - malF b4033 0.19 -2.8
4,241,881 + malF b4033 0.21 -3.0
4,241,881 + malF b4033 0.21 -2.3
4,241,883 + malF b4033 0.21 -2.7
4,241,889 - malF b4033 0.22 -3.3
4,241,889 - malF b4033 0.22 -2.2
4,241,918 + malF b4033 0.24 -2.2
4,241,953 - malF b4033 0.26 -2.2
4,241,986 - malF b4033 0.28 -2.4
4,241,986 - malF b4033 0.28 -1.8
4,242,010 + malF b4033 0.30 -2.7
4,242,016 - malF b4033 0.30 -3.5
4,242,044 + malF b4033 0.32 -1.2
4,242,120 - malF b4033 0.37 -2.6
4,242,120 - malF b4033 0.37 -2.1
4,242,135 - malF b4033 0.38 -2.6
4,242,135 - malF b4033 0.38 -2.3
4,242,180 + malF b4033 0.41 -2.1
4,242,198 - malF b4033 0.42 -2.4
4,242,198 - malF b4033 0.42 -2.0
4,242,198 - malF b4033 0.42 -2.1
4,242,198 - malF b4033 0.42 -2.0
4,242,241 + malF b4033 0.44 -2.4
4,242,338 - malF b4033 0.51 -1.7
4,242,338 - malF b4033 0.51 -1.3
4,242,362 + malF b4033 0.52 +1.6
4,242,385 - malF b4033 0.54 -2.3
4,242,432 + malF b4033 0.57 -2.3
4,242,434 - malF b4033 0.57 -1.2
4,242,438 - malF b4033 0.57 -2.3
4,242,455 - malF b4033 0.58 -2.7
4,242,472 - malF b4033 0.59 -1.8
4,242,472 - malF b4033 0.59 -2.9
4,242,472 - malF b4033 0.59 -2.4
4,242,515 - malF b4033 0.62 -3.1

Or see this region's nucleotide sequence