Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_0830

Experiment: KB with Dimethyl Sulfoxide 0.42 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 0.42 vol%
938,292	-		Psyr_0828	0.75	-0.0
938,310	+		Psyr_0828	0.77	+0.4
938,363	-		Psyr_0828	0.84	+1.2
938,418	-				-1.3
938,472	+				+0.7
938,492	+				+1.0
938,492	+				-2.0
938,492	+				-1.6
938,492	+				-0.8
938,492	+				+0.1
938,492	+				-0.5
938,492	+				-1.3
938,492	+				-0.6
938,492	+				-0.0
938,492	+				-1.0
938,492	+				-1.2
938,492	+				-0.2
938,492	+				+0.5
938,493	-				+1.0
938,493	-				+2.0
938,493	-				+0.1
938,493	-				-0.6
938,493	-				+0.3
938,493	-				+1.7
938,493	-				-0.6
938,493	-				+1.1
938,493	-				+0.2
938,493	-				+1.1
938,493	-				+1.0
938,493	-				-0.9
938,493	-				+0.2
938,493	-				-0.4
938,493	-				-0.3
938,633	+				-0.6
938,633	+				-0.4
938,634	-				-1.2
938,673	+				+1.5
938,673	+				+0.7
938,673	+				+1.5
938,673	+				+0.8
938,674	-				-0.5
938,674	-				+0.6
938,693	+				+0.1
939,192	-				-3.1
939,192	-				-0.0
939,271	+				+1.2
939,272	-				+0.3
939,457	+		Psyr_0830	0.16	-1.0
939,457	+		Psyr_0830	0.16	-2.2
939,458	-		Psyr_0830	0.16	-0.3
939,467	+		Psyr_0830	0.17	+1.0
939,467	+		Psyr_0830	0.17	-1.2
939,645	-		Psyr_0830	0.29	-0.0
939,766	-		Psyr_0830	0.37	-0.4
939,778	-		Psyr_0830	0.38	+0.6
940,025	-		Psyr_0830	0.55	-0.6
940,025	-		Psyr_0830	0.55	-0.5
940,027	-		Psyr_0830	0.55	-1.1
940,182	-		Psyr_0830	0.65	+0.4
940,182	-		Psyr_0830	0.65	-1.5
940,182	-		Psyr_0830	0.65	-0.9
940,182	-		Psyr_0830	0.65	-1.0
940,182	-		Psyr_0830	0.65	-1.5
940,182	-		Psyr_0830	0.65	-2.3
940,450	-		Psyr_0830	0.83	-2.0
940,688	+				-0.4
940,688	+				+0.2
940,695	+				-0.5
940,711	+				-1.0
940,712	-				-1.3
940,712	-				-0.1
940,764	-				-0.6
940,764	-				-1.3
940,803	-				+2.0
940,805	+				-1.9
940,806	-				+1.0
940,954	-				-0.2
940,954	-				-0.8
940,957	+				-0.8
940,957	+				-0.9
940,957	+				-1.8
940,957	+				+0.5
940,957	+				-2.0
940,957	+				-0.8
940,958	-				-0.8
940,958	-				+0.3
940,958	-				-0.5
941,006	+				+0.8
941,006	+				-1.8
941,006	+				-3.1
941,006	+				-1.2
941,006	+				-0.2
941,007	-				-0.1
941,007	-				-0.2
941,007	-				+0.7
941,007	-				+0.7
941,080	-				-0.8
941,080	-				-0.0
941,088	+				-0.8
941,088	+				-1.3
941,103	-				+1.3
941,103	-				+1.0
941,124	-				-0.6
941,126	+				-0.4
941,127	-				-0.7
941,132	+				-0.8
941,133	-				+0.6
941,133	-				-0.3
941,133	-				+0.6
941,134	+				-1.1
941,134	+				-0.0
941,134	+				+1.1
941,134	+				+1.3
941,135	-				-0.0
941,135	-				+0.4
941,234	+				+0.8
941,321	+				+0.0
941,322	-				+1.0
941,322	-				-0.3
941,544	-		Psyr_0831	0.15	-1.0
941,544	-		Psyr_0831	0.15	+2.0
941,657	-		Psyr_0831	0.23	-1.0