Experiment: KB with Dimethyl Sulfoxide 0.42 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0492 and Psyr_0493 overlap by 8 nucleotides Psyr_0493 and Psyr_0494 are separated by 121 nucleotides
Psyr_0492: Psyr_0492 - Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt, at 528,991 to 534,969
_0492
Psyr_0493: Psyr_0493 - CheW-like protein, at 534,962 to 535,432
_0493
Psyr_0494: Psyr_0494 - Protein of unknown function UPF0061, at 535,554 to 537,017
_0494
Position (kb) 534
535
536 Strain fitness (log2 ratio) -2
-1
0
1 at 534.167 kb on - strand, within Psyr_0492 at 534.167 kb on - strand, within Psyr_0492 at 534.167 kb on - strand, within Psyr_0492 at 534.167 kb on - strand, within Psyr_0492 at 534.286 kb on + strand, within Psyr_0492 at 534.286 kb on + strand, within Psyr_0492 at 534.898 kb on + strand at 534.898 kb on + strand at 534.947 kb on - strand at 535.115 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.313 kb on + strand, within Psyr_0493 at 535.314 kb on - strand, within Psyr_0493 at 535.314 kb on - strand, within Psyr_0493 at 535.378 kb on + strand, within Psyr_0493 at 535.430 kb on + strand at 535.430 kb on + strand at 535.435 kb on - strand at 535.486 kb on + strand at 535.486 kb on + strand at 535.735 kb on + strand, within Psyr_0494 at 535.736 kb on - strand, within Psyr_0494 at 535.736 kb on - strand, within Psyr_0494 at 535.802 kb on + strand, within Psyr_0494 at 535.803 kb on - strand, within Psyr_0494 at 535.814 kb on - strand, within Psyr_0494 at 535.921 kb on + strand, within Psyr_0494 at 535.922 kb on - strand, within Psyr_0494 at 535.922 kb on - strand, within Psyr_0494 at 536.026 kb on + strand, within Psyr_0494 at 536.027 kb on - strand, within Psyr_0494 at 536.039 kb on - strand, within Psyr_0494 at 536.240 kb on + strand, within Psyr_0494
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 0.42 vol% remove 534,167 - Psyr_0492 0.87 -0.5 534,167 - Psyr_0492 0.87 +0.3 534,167 - Psyr_0492 0.87 -0.0 534,167 - Psyr_0492 0.87 +0.1 534,286 + Psyr_0492 0.89 -0.5 534,286 + Psyr_0492 0.89 -1.7 534,898 + -0.6 534,898 + -0.1 534,947 - +0.9 535,115 + Psyr_0493 0.32 +0.7 535,313 + Psyr_0493 0.75 -1.0 535,313 + Psyr_0493 0.75 +0.0 535,313 + Psyr_0493 0.75 +0.1 535,313 + Psyr_0493 0.75 -2.1 535,314 - Psyr_0493 0.75 -2.6 535,314 - Psyr_0493 0.75 +0.1 535,378 + Psyr_0493 0.88 -0.5 535,430 + -0.4 535,430 + +0.3 535,435 - -0.8 535,486 + -1.2 535,486 + -0.1 535,735 + Psyr_0494 0.12 +0.5 535,736 - Psyr_0494 0.12 +0.3 535,736 - Psyr_0494 0.12 -1.6 535,802 + Psyr_0494 0.17 -0.7 535,803 - Psyr_0494 0.17 +0.2 535,814 - Psyr_0494 0.18 +0.2 535,921 + Psyr_0494 0.25 -0.0 535,922 - Psyr_0494 0.25 -0.7 535,922 - Psyr_0494 0.25 -1.0 536,026 + Psyr_0494 0.32 -0.5 536,027 - Psyr_0494 0.32 +0.5 536,039 - Psyr_0494 0.33 -1.6 536,240 + Psyr_0494 0.47 +0.1
Or see this region's nucleotide sequence