Experiment: Sorgoleone (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03335 and OH686_03340 are separated by 38 nucleotides OH686_03340 and OH686_03345 overlap by 4 nucleotides OH686_03345 and OH686_03350 are separated by 55 nucleotides
OH686_03335: OH686_03335 - methionine synthase, at 691,509 to 695,219
_03335
OH686_03340: OH686_03340 - Ribosyl nicotinamide transporter, PnuC-like, at 695,258 to 695,821
_03340
OH686_03345: OH686_03345 - Ribosylnicotinamide kinase , at 695,818 to 696,339
_03345
OH686_03350: OH686_03350 - hypothetical protein, at 696,395 to 697,048
_03350
Position (kb) 695
696 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 694.350 kb on + strand, within OH686_03335 at 694.350 kb on + strand, within OH686_03335 at 694.350 kb on + strand, within OH686_03335 at 694.350 kb on + strand, within OH686_03335 at 694.350 kb on + strand, within OH686_03335 at 694.350 kb on + strand, within OH686_03335 at 694.351 kb on - strand, within OH686_03335 at 694.351 kb on - strand, within OH686_03335 at 694.351 kb on - strand, within OH686_03335 at 694.564 kb on - strand, within OH686_03335 at 694.689 kb on + strand, within OH686_03335 at 694.689 kb on + strand, within OH686_03335 at 694.690 kb on - strand, within OH686_03335 at 694.690 kb on - strand, within OH686_03335 at 694.690 kb on - strand, within OH686_03335 at 694.703 kb on + strand, within OH686_03335 at 694.703 kb on + strand, within OH686_03335 at 694.704 kb on - strand, within OH686_03335 at 694.704 kb on - strand, within OH686_03335 at 694.767 kb on + strand, within OH686_03335 at 694.767 kb on + strand, within OH686_03335 at 694.767 kb on + strand, within OH686_03335 at 694.768 kb on - strand, within OH686_03335 at 694.840 kb on + strand, within OH686_03335 at 694.840 kb on + strand, within OH686_03335 at 694.840 kb on + strand, within OH686_03335 at 694.841 kb on - strand, within OH686_03335 at 694.841 kb on - strand, within OH686_03335 at 694.841 kb on - strand, within OH686_03335 at 694.841 kb on - strand, within OH686_03335 at 694.841 kb on - strand, within OH686_03335 at 694.852 kb on - strand at 694.852 kb on - strand at 694.852 kb on - strand at 694.852 kb on - strand at 694.908 kb on + strand at 694.908 kb on + strand at 694.908 kb on + strand at 694.908 kb on + strand at 694.909 kb on - strand at 694.909 kb on - strand at 694.909 kb on - strand at 694.909 kb on - strand at 694.909 kb on - strand at 694.909 kb on - strand at 694.909 kb on - strand at 694.909 kb on - strand at 695.001 kb on + strand at 695.002 kb on - strand at 695.002 kb on - strand at 695.002 kb on - strand at 695.043 kb on + strand at 695.043 kb on + strand at 695.043 kb on + strand at 695.044 kb on - strand at 695.044 kb on - strand at 695.079 kb on + strand at 695.080 kb on - strand at 695.080 kb on - strand at 695.080 kb on - strand at 695.103 kb on + strand at 695.103 kb on + strand at 695.103 kb on + strand at 695.103 kb on + strand at 695.103 kb on + strand at 695.103 kb on + strand at 695.103 kb on + strand at 695.103 kb on + strand at 695.104 kb on - strand at 695.145 kb on + strand at 695.145 kb on + strand at 695.145 kb on + strand at 695.145 kb on + strand at 695.145 kb on + strand at 695.145 kb on + strand at 695.145 kb on + strand at 695.146 kb on - strand at 695.146 kb on - strand at 695.146 kb on - strand at 695.146 kb on - strand at 695.146 kb on - strand at 695.146 kb on - strand at 695.146 kb on - strand at 695.146 kb on - strand at 695.209 kb on - strand at 695.209 kb on - strand at 695.253 kb on + strand at 695.254 kb on - strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.257 kb on + strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.258 kb on - strand at 695.290 kb on - strand at 695.366 kb on + strand, within OH686_03340 at 695.366 kb on + strand, within OH686_03340 at 695.367 kb on - strand, within OH686_03340 at 695.396 kb on + strand, within OH686_03340 at 695.396 kb on + strand, within OH686_03340 at 695.397 kb on - strand, within OH686_03340 at 695.397 kb on - strand, within OH686_03340 at 695.406 kb on + strand, within OH686_03340 at 695.421 kb on + strand, within OH686_03340 at 695.441 kb on + strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.442 kb on - strand, within OH686_03340 at 695.594 kb on + strand, within OH686_03340 at 695.594 kb on + strand, within OH686_03340 at 695.595 kb on - strand, within OH686_03340 at 695.686 kb on - strand, within OH686_03340 at 695.686 kb on - strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.702 kb on + strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.703 kb on - strand, within OH686_03340 at 695.729 kb on + strand, within OH686_03340 at 695.729 kb on + strand, within OH686_03340 at 695.729 kb on + strand, within OH686_03340 at 695.730 kb on - strand, within OH686_03340 at 695.750 kb on + strand, within OH686_03340 at 695.757 kb on + strand, within OH686_03340 at 695.758 kb on - strand, within OH686_03340 at 695.758 kb on - strand, within OH686_03340 at 695.758 kb on - strand, within OH686_03340 at 695.758 kb on - strand, within OH686_03340 at 695.914 kb on + strand, within OH686_03345 at 695.914 kb on + strand, within OH686_03345 at 695.914 kb on + strand, within OH686_03345 at 695.915 kb on - strand, within OH686_03345 at 695.915 kb on - strand, within OH686_03345 at 695.915 kb on - strand, within OH686_03345 at 695.915 kb on - strand, within OH686_03345 at 695.950 kb on - strand, within OH686_03345 at 695.950 kb on - strand, within OH686_03345 at 696.060 kb on + strand, within OH686_03345 at 696.060 kb on + strand, within OH686_03345 at 696.061 kb on - strand, within OH686_03345 at 696.131 kb on - strand, within OH686_03345 at 696.131 kb on - strand, within OH686_03345 at 696.131 kb on - strand, within OH686_03345 at 696.131 kb on - strand, within OH686_03345 at 696.215 kb on + strand, within OH686_03345 at 696.215 kb on + strand, within OH686_03345 at 696.215 kb on + strand, within OH686_03345 at 696.216 kb on - strand, within OH686_03345 at 696.216 kb on - strand, within OH686_03345 at 696.216 kb on - strand, within OH686_03345 at 696.216 kb on - strand, within OH686_03345 at 696.320 kb on + strand at 696.320 kb on + strand at 696.320 kb on + strand at 696.321 kb on - strand at 696.321 kb on - strand at 696.321 kb on - strand at 696.321 kb on - strand at 696.359 kb on + strand at 696.359 kb on + strand at 696.360 kb on - strand at 696.360 kb on - strand at 696.360 kb on - strand at 696.410 kb on + strand at 696.410 kb on + strand at 696.410 kb on + strand at 696.410 kb on + strand at 696.410 kb on + strand at 696.410 kb on + strand at 696.410 kb on + strand at 696.410 kb on + strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.411 kb on - strand at 696.471 kb on - strand, within OH686_03350 at 696.686 kb on + strand, within OH686_03350 at 696.686 kb on + strand, within OH686_03350 at 696.686 kb on + strand, within OH686_03350 at 696.686 kb on + strand, within OH686_03350 at 696.686 kb on + strand, within OH686_03350 at 696.687 kb on - strand, within OH686_03350 at 696.692 kb on + strand, within OH686_03350 at 696.692 kb on + strand, within OH686_03350 at 696.693 kb on - strand, within OH686_03350 at 696.716 kb on + strand, within OH686_03350 at 696.716 kb on + strand, within OH686_03350 at 696.716 kb on + strand, within OH686_03350 at 696.717 kb on - strand, within OH686_03350 at 696.717 kb on - strand, within OH686_03350 at 696.755 kb on + strand, within OH686_03350 at 696.755 kb on + strand, within OH686_03350 at 696.756 kb on - strand, within OH686_03350 at 696.756 kb on - strand, within OH686_03350 at 696.756 kb on - strand, within OH686_03350
Per-strain Table
Position Strand Gene LocusTag Fraction Sorgoleone (C) remove 694,350 + OH686_03335 0.77 +1.2 694,350 + OH686_03335 0.77 +0.7 694,350 + OH686_03335 0.77 -1.0 694,350 + OH686_03335 0.77 -1.0 694,350 + OH686_03335 0.77 -0.2 694,350 + OH686_03335 0.77 -1.1 694,351 - OH686_03335 0.77 +0.6 694,351 - OH686_03335 0.77 -0.7 694,351 - OH686_03335 0.77 -0.4 694,564 - OH686_03335 0.82 -0.5 694,689 + OH686_03335 0.86 -0.2 694,689 + OH686_03335 0.86 -0.7 694,690 - OH686_03335 0.86 +0.2 694,690 - OH686_03335 0.86 -0.1 694,690 - OH686_03335 0.86 -0.5 694,703 + OH686_03335 0.86 -0.6 694,703 + OH686_03335 0.86 +0.1 694,704 - OH686_03335 0.86 -1.1 694,704 - OH686_03335 0.86 -1.2 694,767 + OH686_03335 0.88 -1.1 694,767 + OH686_03335 0.88 -0.4 694,767 + OH686_03335 0.88 -1.4 694,768 - OH686_03335 0.88 -0.4 694,840 + OH686_03335 0.90 -1.0 694,840 + OH686_03335 0.90 -0.3 694,840 + OH686_03335 0.90 -0.6 694,841 - OH686_03335 0.90 -0.6 694,841 - OH686_03335 0.90 -1.5 694,841 - OH686_03335 0.90 -1.9 694,841 - OH686_03335 0.90 -1.4 694,841 - OH686_03335 0.90 +1.1 694,852 - -2.8 694,852 - -1.7 694,852 - +0.6 694,852 - +0.3 694,908 + -1.1 694,908 + -1.1 694,908 + +0.6 694,908 + -0.1 694,909 - -0.6 694,909 - +0.1 694,909 - -0.3 694,909 - +0.3 694,909 - -0.3 694,909 - -1.0 694,909 - -0.8 694,909 - -0.4 695,001 + -0.1 695,002 - -1.0 695,002 - -0.5 695,002 - +0.7 695,043 + -0.2 695,043 + -0.0 695,043 + +0.2 695,044 - -0.6 695,044 - -0.3 695,079 + +1.1 695,080 - +1.0 695,080 - -2.0 695,080 - -0.1 695,103 + +1.1 695,103 + +0.2 695,103 + -2.0 695,103 + +0.3 695,103 + -0.5 695,103 + +0.8 695,103 + -1.6 695,103 + -1.1 695,104 - +0.1 695,145 + -0.5 695,145 + -1.3 695,145 + +1.6 695,145 + -0.8 695,145 + -2.4 695,145 + -0.1 695,145 + -0.2 695,146 - -2.5 695,146 - -0.9 695,146 - +0.9 695,146 - +0.1 695,146 - +0.4 695,146 - +0.6 695,146 - +0.4 695,146 - -1.3 695,209 - -0.4 695,209 - +0.1 695,253 + -0.6 695,254 - -0.4 695,257 + +0.9 695,257 + +0.0 695,257 + +0.7 695,257 + -0.1 695,257 + -0.5 695,257 + -1.3 695,257 + +0.0 695,257 + +0.1 695,257 + +0.6 695,257 + -0.2 695,257 + -1.3 695,258 - -0.7 695,258 - +0.8 695,258 - +0.4 695,258 - -0.3 695,258 - +0.1 695,258 - -0.8 695,258 - +0.4 695,258 - +0.1 695,258 - +1.2 695,258 - +0.5 695,258 - -0.4 695,258 - -0.1 695,258 - +1.0 695,290 - -0.5 695,366 + OH686_03340 0.19 -0.4 695,366 + OH686_03340 0.19 -0.3 695,367 - OH686_03340 0.19 -1.0 695,396 + OH686_03340 0.24 +1.5 695,396 + OH686_03340 0.24 -0.2 695,397 - OH686_03340 0.25 +0.0 695,397 - OH686_03340 0.25 +0.4 695,406 + OH686_03340 0.26 +0.7 695,421 + OH686_03340 0.29 -0.4 695,441 + OH686_03340 0.32 -0.1 695,442 - OH686_03340 0.33 -0.2 695,442 - OH686_03340 0.33 -1.3 695,442 - OH686_03340 0.33 +0.9 695,442 - OH686_03340 0.33 -0.2 695,442 - OH686_03340 0.33 +0.2 695,442 - OH686_03340 0.33 +0.5 695,442 - OH686_03340 0.33 -0.2 695,442 - OH686_03340 0.33 +0.9 695,442 - OH686_03340 0.33 +0.8 695,594 + OH686_03340 0.60 +0.2 695,594 + OH686_03340 0.60 +0.1 695,595 - OH686_03340 0.60 -0.6 695,686 - OH686_03340 0.76 -0.2 695,686 - OH686_03340 0.76 -0.6 695,702 + OH686_03340 0.79 +0.1 695,702 + OH686_03340 0.79 +1.0 695,702 + OH686_03340 0.79 -0.4 695,702 + OH686_03340 0.79 +0.9 695,702 + OH686_03340 0.79 -0.1 695,702 + OH686_03340 0.79 -0.2 695,702 + OH686_03340 0.79 -0.3 695,702 + OH686_03340 0.79 +0.9 695,702 + OH686_03340 0.79 +0.7 695,702 + OH686_03340 0.79 +0.1 695,702 + OH686_03340 0.79 +1.5 695,702 + OH686_03340 0.79 +0.6 695,702 + OH686_03340 0.79 -0.1 695,703 - OH686_03340 0.79 -0.3 695,703 - OH686_03340 0.79 -0.3 695,703 - OH686_03340 0.79 +0.0 695,703 - OH686_03340 0.79 +0.1 695,703 - OH686_03340 0.79 +0.5 695,703 - OH686_03340 0.79 -0.1 695,703 - OH686_03340 0.79 -0.3 695,703 - OH686_03340 0.79 -1.8 695,729 + OH686_03340 0.84 +0.0 695,729 + OH686_03340 0.84 -1.1 695,729 + OH686_03340 0.84 +0.5 695,730 - OH686_03340 0.84 +0.8 695,750 + OH686_03340 0.87 +0.1 695,757 + OH686_03340 0.88 -0.2 695,758 - OH686_03340 0.89 -1.1 695,758 - OH686_03340 0.89 +0.5 695,758 - OH686_03340 0.89 -1.1 695,758 - OH686_03340 0.89 +0.9 695,914 + OH686_03345 0.18 +0.1 695,914 + OH686_03345 0.18 +0.2 695,914 + OH686_03345 0.18 +0.7 695,915 - OH686_03345 0.19 -0.3 695,915 - OH686_03345 0.19 -0.6 695,915 - OH686_03345 0.19 +0.2 695,915 - OH686_03345 0.19 +0.7 695,950 - OH686_03345 0.25 +0.6 695,950 - OH686_03345 0.25 +0.0 696,060 + OH686_03345 0.46 -0.3 696,060 + OH686_03345 0.46 +1.5 696,061 - OH686_03345 0.47 -0.2 696,131 - OH686_03345 0.60 +1.0 696,131 - OH686_03345 0.60 +0.4 696,131 - OH686_03345 0.60 +0.1 696,131 - OH686_03345 0.60 -0.2 696,215 + OH686_03345 0.76 -1.0 696,215 + OH686_03345 0.76 +0.1 696,215 + OH686_03345 0.76 +0.1 696,216 - OH686_03345 0.76 -1.3 696,216 - OH686_03345 0.76 -0.4 696,216 - OH686_03345 0.76 -0.2 696,216 - OH686_03345 0.76 +2.1 696,320 + -1.3 696,320 + -0.1 696,320 + -0.2 696,321 - +0.0 696,321 - -0.9 696,321 - +1.5 696,321 - +0.0 696,359 + +0.2 696,359 + -0.1 696,360 - -0.3 696,360 - -0.6 696,360 - -0.8 696,410 + -0.9 696,410 + -0.6 696,410 + +0.2 696,410 + -0.4 696,410 + +0.1 696,410 + +0.5 696,410 + +0.1 696,410 + +0.3 696,411 - +0.0 696,411 - +0.1 696,411 - +0.8 696,411 - +0.4 696,411 - +0.6 696,411 - -2.0 696,411 - -0.1 696,411 - +0.6 696,411 - +0.2 696,471 - OH686_03350 0.12 +0.4 696,686 + OH686_03350 0.44 +1.7 696,686 + OH686_03350 0.44 +0.3 696,686 + OH686_03350 0.44 +0.2 696,686 + OH686_03350 0.44 -0.6 696,686 + OH686_03350 0.44 -0.3 696,687 - OH686_03350 0.45 +0.6 696,692 + OH686_03350 0.45 +1.7 696,692 + OH686_03350 0.45 +0.2 696,693 - OH686_03350 0.46 -0.1 696,716 + OH686_03350 0.49 +0.1 696,716 + OH686_03350 0.49 +0.2 696,716 + OH686_03350 0.49 +0.0 696,717 - OH686_03350 0.49 -0.0 696,717 - OH686_03350 0.49 -0.7 696,755 + OH686_03350 0.55 +0.8 696,755 + OH686_03350 0.55 +0.3 696,756 - OH686_03350 0.55 -0.1 696,756 - OH686_03350 0.55 +0.1 696,756 - OH686_03350 0.55 +1.4
Or see this region's nucleotide sequence