Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02017

Experiment: PYE no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02016 and CCNA_02017 overlap by 4 nucleotidesCCNA_02017 and CCNA_02018 are separated by 8 nucleotidesCCNA_02018 and CCNA_02019 overlap by 4 nucleotides CCNA_02016: CCNA_02016 - NADH-quinone oxidoreductase chain M, at 2,162,766 to 2,164,268 _02016 CCNA_02017: CCNA_02017 - NADH-quinone oxidoreductase chain L, at 2,164,265 to 2,166,325 _02017 CCNA_02018: CCNA_02018 - NADH-quinone oxidoreductase chain K, at 2,166,334 to 2,166,639 _02018 CCNA_02019: CCNA_02019 - NADH-quinone oxidoreductase chain J, at 2,166,636 to 2,167,253 _02019 Position (kb) 2164 2165 2166 2167Strain fitness (log2 ratio) -1 0 1at 2164.949 kb on - strand, within CCNA_02017at 2166.682 kb on - strandat 2166.682 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE no stress control
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2,164,949 - CCNA_02017 0.33 -0.5
2,166,682 - +0.1
2,166,682 - -0.8

Or see this region's nucleotide sequence