Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01762

Experiment: PYE no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_01761 and CCNA_01762 overlap by 4 nucleotidesCCNA_01762 and CCNA_01763 are separated by 227 nucleotides CCNA_01761: CCNA_01761 - YjgP/YjgQ family membrane permease, at 1,889,529 to 1,890,635 _01761 CCNA_01762: CCNA_01762 - YjgP/YjgQ family membrane permease, at 1,890,632 to 1,891,771 _01762 CCNA_01763: CCNA_01763 - multifunctional aminopeptidase, at 1,891,999 to 1,893,480 _01763 Position (kb) 1890 1891 1892Strain fitness (log2 ratio) -1 0 1 2at 1890.624 kb on + strandat 1890.629 kb on + strandat 1890.696 kb on - strandat 1890.737 kb on - strandat 1891.794 kb on - strandat 1891.834 kb on - strandat 1891.834 kb on - strandat 1891.834 kb on - strandat 1891.838 kb on + strandat 1891.840 kb on + strandat 1891.846 kb on - strandat 1891.847 kb on - strandat 1891.914 kb on + strandat 1891.914 kb on + strandat 1891.914 kb on + strandat 1891.914 kb on + strandat 1891.919 kb on + strandat 1891.922 kb on - strandat 1891.922 kb on - strandat 1891.927 kb on - strandat 1891.967 kb on + strandat 1892.039 kb on - strandat 1892.213 kb on + strand, within CCNA_01763at 1892.231 kb on - strand, within CCNA_01763at 1892.439 kb on + strand, within CCNA_01763at 1892.448 kb on + strand, within CCNA_01763at 1892.521 kb on + strand, within CCNA_01763at 1892.524 kb on - strand, within CCNA_01763at 1892.531 kb on + strand, within CCNA_01763at 1892.546 kb on - strand, within CCNA_01763at 1892.597 kb on - strand, within CCNA_01763at 1892.655 kb on + strand, within CCNA_01763at 1892.666 kb on + strand, within CCNA_01763

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE no stress control
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1,890,624 + +1.4
1,890,629 + -0.3
1,890,696 - +0.9
1,890,737 - +0.8
1,891,794 - +0.1
1,891,834 - +0.5
1,891,834 - -0.6
1,891,834 - -0.4
1,891,838 + +1.2
1,891,840 + +1.5
1,891,846 - -1.5
1,891,847 - +0.1
1,891,914 + -0.4
1,891,914 + +1.5
1,891,914 + +0.5
1,891,914 + -0.2
1,891,919 + -0.1
1,891,922 - -0.8
1,891,922 - -0.7
1,891,927 - -1.2
1,891,967 + +0.7
1,892,039 - -0.1
1,892,213 + CCNA_01763 0.14 +0.7
1,892,231 - CCNA_01763 0.16 +0.7
1,892,439 + CCNA_01763 0.30 +0.6
1,892,448 + CCNA_01763 0.30 -0.3
1,892,521 + CCNA_01763 0.35 +0.9
1,892,524 - CCNA_01763 0.35 +1.1
1,892,531 + CCNA_01763 0.36 +1.0
1,892,546 - CCNA_01763 0.37 -0.7
1,892,597 - CCNA_01763 0.40 -0.4
1,892,655 + CCNA_01763 0.44 +0.7
1,892,666 + CCNA_01763 0.45 +1.9

Or see this region's nucleotide sequence