Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_00103

Experiment: PYE no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE no stress control
112,473	-		CCNA_00101	0.56	-0.1
112,549	+		CCNA_00101	0.62	-0.1
112,567	-		CCNA_00101	0.64	-0.5
112,593	+		CCNA_00101	0.66	-0.9
112,624	-		CCNA_00101	0.68	-0.4
112,667	+		CCNA_00101	0.71	-0.5
112,667	+		CCNA_00101	0.71	-0.8
112,667	+		CCNA_00101	0.71	-1.3
112,667	+		CCNA_00101	0.71	+0.1
112,667	+		CCNA_00101	0.71	+2.6
112,672	+		CCNA_00101	0.72	-1.0
112,716	+		CCNA_00101	0.75	-0.9
112,724	-		CCNA_00101	0.76	+1.0
112,724	-		CCNA_00101	0.76	-0.4
112,729	+		CCNA_00101	0.76	-1.0
112,752	+		CCNA_00101	0.78	-0.3
112,752	+		CCNA_00101	0.78	-0.8
112,752	+		CCNA_00101	0.78	-0.4
112,752	+		CCNA_00101	0.78	-1.0
112,760	-		CCNA_00101	0.79	-3.2
112,760	-		CCNA_00101	0.79	+0.1
112,773	-		CCNA_00101	0.80	-0.2
112,778	+		CCNA_00101	0.80	-0.1
112,794	+		CCNA_00101	0.81	+0.6
112,804	+		CCNA_00101	0.82	+1.3
112,812	-		CCNA_00101	0.83	+0.3
112,851	+		CCNA_00101	0.86	-0.7
112,851	+		CCNA_00101	0.86	-0.9
112,851	+		CCNA_00101	0.86	+1.0
112,851	+		CCNA_00101	0.86	-0.8
112,851	+		CCNA_00101	0.86	-0.6
112,859	-		CCNA_00101	0.86	+1.2
112,859	-		CCNA_00101	0.86	+0.8
112,859	-		CCNA_00101	0.86	+0.4
112,859	-		CCNA_00101	0.86	+0.2
112,871	+		CCNA_00101	0.87	+0.6
112,871	+		CCNA_00101	0.87	-1.1
112,871	+		CCNA_00101	0.87	+0.3
112,871	+		CCNA_00101	0.87	+0.0
112,879	-		CCNA_00101	0.88	-0.1
112,879	-		CCNA_00101	0.88	+0.1
112,879	-		CCNA_00101	0.88	-0.4
112,879	-		CCNA_00101	0.88	+0.2
112,879	-		CCNA_00101	0.88	+0.1
112,898	+		CCNA_00101	0.89	+0.3
112,916	-				-0.4
112,916	-				+0.1
112,963	+				+0.6
112,963	+				+0.7
112,963	+				-0.0
112,981	-				-0.1
113,022	+				-0.7
113,022	+				+0.1
113,022	+				+1.6
113,030	-				-0.2
113,030	-				+0.4
113,030	-				+0.1
113,030	-				+0.2
113,044	-				+0.2
113,080	+				+0.6
113,105	-				-0.3
113,168	+				+1.5
113,203	-		CCNA_00102	0.23	+0.3
113,217	+		CCNA_00102	0.29	-0.4
113,220	-		CCNA_00102	0.31	+0.2
113,225	-		CCNA_00102	0.33	-0.1
113,225	-		CCNA_00102	0.33	-0.8
113,317	+		CCNA_00102	0.74	-0.6
113,317	+		CCNA_00102	0.74	-0.6
113,325	-		CCNA_00102	0.77	+0.3
113,392	-				-1.4
113,423	+				+0.0
113,433	-				-0.0
113,456	-				-0.3
113,486	-				-0.3
113,525	+				-0.2
113,525	+				-0.4
113,559	+				+0.0
113,573	+				+0.3
113,573	+				-0.5
113,580	+				-2.8
113,581	-				-0.2
113,590	+				+0.5
113,598	-				-0.4
113,616	+				-0.2
113,682	+		CCNA_00103	0.13	+0.6
113,719	-		CCNA_00103	0.15	+0.0
113,723	+		CCNA_00103	0.15	+0.4
113,723	+		CCNA_00103	0.15	-0.4
113,723	+		CCNA_00103	0.15	+0.8
113,752	-		CCNA_00103	0.17	-1.7
113,766	-		CCNA_00103	0.18	-0.8
113,766	-		CCNA_00103	0.18	-0.2
113,766	-		CCNA_00103	0.18	+0.0
113,789	+		CCNA_00103	0.19	+2.1
113,808	-		CCNA_00103	0.20	-1.2
113,828	+		CCNA_00103	0.21	+0.3
113,828	+		CCNA_00103	0.21	-0.1
113,835	+		CCNA_00103	0.22	+1.0
113,836	-		CCNA_00103	0.22	+0.2
113,836	-		CCNA_00103	0.22	-0.3
113,844	-		CCNA_00103	0.22	-0.4
113,891	+		CCNA_00103	0.25	+0.2
113,895	-		CCNA_00103	0.25	+0.1
113,921	+		CCNA_00103	0.27	+0.2
113,933	+		CCNA_00103	0.28	-1.0
113,934	+		CCNA_00103	0.28	-0.3
113,934	+		CCNA_00103	0.28	+0.0
113,941	-		CCNA_00103	0.28	+0.3
113,966	-		CCNA_00103	0.30	-1.7
114,059	+		CCNA_00103	0.35	-0.7
114,076	+		CCNA_00103	0.36	+1.1
114,084	-		CCNA_00103	0.37	+0.0
114,146	+		CCNA_00103	0.40	+0.2
114,162	-		CCNA_00103	0.41	-0.6
114,162	-		CCNA_00103	0.41	-0.2
114,226	-		CCNA_00103	0.45	+0.0
114,263	-		CCNA_00103	0.47	-0.0
114,271	+		CCNA_00103	0.48	+0.0
114,271	+		CCNA_00103	0.48	-0.2
114,271	+		CCNA_00103	0.48	+0.3
114,279	-		CCNA_00103	0.48	-1.4
114,279	-		CCNA_00103	0.48	+1.6
114,279	-		CCNA_00103	0.48	-2.3
114,279	-		CCNA_00103	0.48	+0.8
114,279	-		CCNA_00103	0.48	+0.7
114,279	-		CCNA_00103	0.48	+0.5
114,279	-		CCNA_00103	0.48	-1.6
114,279	-		CCNA_00103	0.48	-1.2
114,284	-		CCNA_00103	0.48	-0.2
114,284	-		CCNA_00103	0.48	-1.0
114,286	+		CCNA_00103	0.48	+1.5
114,306	+		CCNA_00103	0.50	-0.5
114,324	-		CCNA_00103	0.51	-0.2
114,329	+		CCNA_00103	0.51	-0.1
114,337	-		CCNA_00103	0.51	-0.5
114,347	-		CCNA_00103	0.52	-1.9
114,347	-		CCNA_00103	0.52	-0.7
114,367	+		CCNA_00103	0.53	-0.2
114,372	+		CCNA_00103	0.54	+0.6
114,372	+		CCNA_00103	0.54	+0.1
114,380	-		CCNA_00103	0.54	-0.3
114,380	-		CCNA_00103	0.54	-0.6
114,380	-		CCNA_00103	0.54	-0.3
114,380	-		CCNA_00103	0.54	+0.2
114,391	+		CCNA_00103	0.55	-0.2
114,393	+		CCNA_00103	0.55	-0.3
114,412	-		CCNA_00103	0.56	+0.9
114,470	+		CCNA_00103	0.59	+0.2
114,539	+		CCNA_00103	0.63	+0.3
114,548	+		CCNA_00103	0.64	+0.6
114,556	-		CCNA_00103	0.64	+0.2
114,556	-		CCNA_00103	0.64	+0.1
114,570	-		CCNA_00103	0.65	-0.2
114,575	-		CCNA_00103	0.65	+1.0
114,578	+		CCNA_00103	0.66	+0.5
114,578	+		CCNA_00103	0.66	+0.4
114,593	+		CCNA_00103	0.67	+0.4
114,601	-		CCNA_00103	0.67	+1.0
114,601	-		CCNA_00103	0.67	-0.8
114,601	-		CCNA_00103	0.67	-0.5
114,624	+		CCNA_00103	0.68	+1.1
114,626	+		CCNA_00103	0.68	-0.4
114,639	+		CCNA_00103	0.69	+0.2
114,658	+		CCNA_00103	0.70	-0.0
114,658	+		CCNA_00103	0.70	-0.4
114,666	-		CCNA_00103	0.71	-0.2
114,666	-		CCNA_00103	0.71	-0.9
114,671	+		CCNA_00103	0.71	+0.7
114,692	-		CCNA_00103	0.72	-0.7
114,735	+		CCNA_00103	0.75	-0.3
114,797	+		CCNA_00103	0.79	-0.2
114,894	+		CCNA_00103	0.84	-1.1
114,899	+		CCNA_00103	0.85	-0.0
114,902	-		CCNA_00103	0.85	+0.0
114,906	+		CCNA_00103	0.85	-0.6
114,906	+		CCNA_00103	0.85	-0.2
114,907	-		CCNA_00103	0.85	+0.2
114,926	-		CCNA_00103	0.86	-1.1
114,926	-		CCNA_00103	0.86	+1.8
114,927	-		CCNA_00103	0.86	-0.8
114,927	-		CCNA_00103	0.86	+0.2
115,005	-				+0.4
115,007	+				-0.6
115,010	-				+0.4
115,015	-				-0.7
115,015	-				-1.8
115,019	+				+0.2
115,020	-				-0.6
115,027	-				-1.4
115,027	-				+0.0
115,043	+				+0.2
115,043	+				-0.0
115,057	-				-0.3
115,100	-				-0.8
115,138	+				+0.1
115,138	+				+0.3
115,138	+				-0.1
115,146	-				-0.6
115,146	-				-1.2
115,146	-				-0.8
115,146	-				+1.0
115,152	-				+0.7
115,176	+				+0.4
115,176	+				-0.3
115,176	+				+0.3
115,176	+				+0.4
115,176	+				+1.0
115,184	-				-0.4
115,184	-				-0.7
115,184	-				-0.1
115,184	-				-0.1
115,184	-				+0.0
115,184	-				-0.0
115,189	+				+0.5
115,197	-				+0.7
115,209	+				-0.2
115,221	+				-0.2
115,223	+				-0.3
115,223	+				+0.2
115,247	-				-1.4
115,255	+				+0.1
115,255	-				-1.4
115,267	+				+0.1
115,276	+				+0.0
115,365	-		CCNA_00104	0.11	-0.2
115,508	+		CCNA_00104	0.31	-0.8
115,508	+		CCNA_00104	0.31	-0.3
115,508	+		CCNA_00104	0.31	+0.4
115,516	-		CCNA_00104	0.32	+0.2
115,516	-		CCNA_00104	0.32	+0.3
115,516	-		CCNA_00104	0.32	-0.3
115,556	+		CCNA_00104	0.38	+1.2
115,556	+		CCNA_00104	0.38	+0.1
115,564	-		CCNA_00104	0.39	-0.2
115,564	-		CCNA_00104	0.39	-0.2
115,564	-		CCNA_00104	0.39	-0.5
115,564	-		CCNA_00104	0.39	+0.0
115,564	-		CCNA_00104	0.39	-0.5
115,564	-		CCNA_00104	0.39	+0.1
115,604	+		CCNA_00104	0.45	+0.1
115,643	+		CCNA_00104	0.50	-0.7
115,643	+		CCNA_00104	0.50	-0.0
115,646	-		CCNA_00104	0.51	+0.2
115,651	-		CCNA_00104	0.52	+0.2
115,651	-		CCNA_00104	0.52	-0.4
115,661	-		CCNA_00104	0.53	+0.0
115,712	-		CCNA_00104	0.60	+1.1
115,754	+		CCNA_00104	0.66	-0.6
115,760	+		CCNA_00104	0.67	-0.7
115,768	-		CCNA_00104	0.68	-0.5
115,768	-		CCNA_00104	0.68	+0.5
115,801	+		CCNA_00104	0.73	-0.3
115,835	-		CCNA_00104	0.78	-0.6
115,847	+		CCNA_00104	0.79	-0.3
115,852	+		CCNA_00104	0.80	-0.9
115,860	-		CCNA_00104	0.81	-0.3
115,876	+		CCNA_00104	0.84	-1.1
115,876	+		CCNA_00104	0.84	+0.3
115,876	+		CCNA_00104	0.84	-0.2
115,947	-				+0.0
116,003	-				+0.9
116,056	+				-0.3
116,067	+				+0.6