Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS17675 and ABIE41_RS17680 are separated by 54 nucleotides ABIE41_RS17680 and ABIE41_RS17685 are separated by 80 nucleotides ABIE41_RS17685 and ABIE41_RS17690 are separated by 89 nucleotides
ABIE41_RS17675: ABIE41_RS17675 - ABC-F family ATP-binding cassette domain-containing protein, at 3,640,147 to 3,642,021
_RS17675
ABIE41_RS17680: ABIE41_RS17680 - NADP-dependent oxidoreductase, at 3,642,076 to 3,643,077
_RS17680
ABIE41_RS17685: ABIE41_RS17685 - oxidoreductase, at 3,643,158 to 3,643,973
_RS17685
ABIE41_RS17690: ABIE41_RS17690 - helix-turn-helix domain-containing protein, at 3,644,063 to 3,644,494
_RS17690
Position (kb) 3642
3643
3644 Strain fitness (log2 ratio) -1
0
1
2 at 3641.105 kb on - strand, within ABIE41_RS17675 at 3641.105 kb on - strand, within ABIE41_RS17675 at 3641.275 kb on + strand, within ABIE41_RS17675 at 3641.275 kb on + strand, within ABIE41_RS17675 at 3641.276 kb on - strand, within ABIE41_RS17675 at 3641.566 kb on + strand, within ABIE41_RS17675 at 3641.566 kb on + strand, within ABIE41_RS17675 at 3642.125 kb on + strand at 3642.126 kb on - strand at 3642.458 kb on + strand, within ABIE41_RS17680 at 3642.495 kb on - strand, within ABIE41_RS17680 at 3642.495 kb on - strand, within ABIE41_RS17680 at 3642.495 kb on - strand, within ABIE41_RS17680 at 3642.495 kb on - strand, within ABIE41_RS17680 at 3642.815 kb on + strand, within ABIE41_RS17680 at 3642.815 kb on + strand, within ABIE41_RS17680 at 3642.815 kb on + strand, within ABIE41_RS17680 at 3642.815 kb on + strand, within ABIE41_RS17680 at 3642.816 kb on - strand, within ABIE41_RS17680 at 3642.816 kb on - strand, within ABIE41_RS17680 at 3642.816 kb on - strand, within ABIE41_RS17680 at 3643.066 kb on - strand at 3643.140 kb on + strand at 3643.140 kb on + strand at 3643.261 kb on + strand, within ABIE41_RS17685 at 3643.261 kb on + strand, within ABIE41_RS17685 at 3643.261 kb on + strand, within ABIE41_RS17685 at 3643.261 kb on + strand, within ABIE41_RS17685 at 3643.262 kb on - strand, within ABIE41_RS17685 at 3643.384 kb on + strand, within ABIE41_RS17685 at 3643.385 kb on - strand, within ABIE41_RS17685 at 3643.537 kb on + strand, within ABIE41_RS17685 at 3643.537 kb on + strand, within ABIE41_RS17685 at 3643.538 kb on - strand, within ABIE41_RS17685 at 3643.538 kb on - strand, within ABIE41_RS17685 at 3643.538 kb on - strand, within ABIE41_RS17685 at 3643.550 kb on - strand, within ABIE41_RS17685 at 3643.581 kb on + strand, within ABIE41_RS17685 at 3643.581 kb on + strand, within ABIE41_RS17685 at 3643.581 kb on + strand, within ABIE41_RS17685 at 3643.581 kb on + strand, within ABIE41_RS17685 at 3643.582 kb on - strand, within ABIE41_RS17685 at 3643.582 kb on - strand, within ABIE41_RS17685 at 3643.582 kb on - strand, within ABIE41_RS17685 at 3643.716 kb on + strand, within ABIE41_RS17685
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 3,641,105 - ABIE41_RS17675 0.51 +0.5 3,641,105 - ABIE41_RS17675 0.51 -0.4 3,641,275 + ABIE41_RS17675 0.60 +0.8 3,641,275 + ABIE41_RS17675 0.60 -0.1 3,641,276 - ABIE41_RS17675 0.60 +0.5 3,641,566 + ABIE41_RS17675 0.76 -0.2 3,641,566 + ABIE41_RS17675 0.76 -0.4 3,642,125 + -0.5 3,642,126 - -0.4 3,642,458 + ABIE41_RS17680 0.38 -0.3 3,642,495 - ABIE41_RS17680 0.42 -0.0 3,642,495 - ABIE41_RS17680 0.42 +0.2 3,642,495 - ABIE41_RS17680 0.42 +0.2 3,642,495 - ABIE41_RS17680 0.42 -1.2 3,642,815 + ABIE41_RS17680 0.74 -0.6 3,642,815 + ABIE41_RS17680 0.74 -0.1 3,642,815 + ABIE41_RS17680 0.74 -1.4 3,642,815 + ABIE41_RS17680 0.74 +0.6 3,642,816 - ABIE41_RS17680 0.74 -1.4 3,642,816 - ABIE41_RS17680 0.74 -1.4 3,642,816 - ABIE41_RS17680 0.74 -0.1 3,643,066 - +0.7 3,643,140 + -0.3 3,643,140 + +1.5 3,643,261 + ABIE41_RS17685 0.13 +2.2 3,643,261 + ABIE41_RS17685 0.13 +0.6 3,643,261 + ABIE41_RS17685 0.13 +1.1 3,643,261 + ABIE41_RS17685 0.13 +0.1 3,643,262 - ABIE41_RS17685 0.13 +0.1 3,643,384 + ABIE41_RS17685 0.28 +0.0 3,643,385 - ABIE41_RS17685 0.28 +0.4 3,643,537 + ABIE41_RS17685 0.46 +0.2 3,643,537 + ABIE41_RS17685 0.46 +1.0 3,643,538 - ABIE41_RS17685 0.47 +0.1 3,643,538 - ABIE41_RS17685 0.47 -1.6 3,643,538 - ABIE41_RS17685 0.47 +0.9 3,643,550 - ABIE41_RS17685 0.48 -0.0 3,643,581 + ABIE41_RS17685 0.52 -0.4 3,643,581 + ABIE41_RS17685 0.52 +0.6 3,643,581 + ABIE41_RS17685 0.52 -0.7 3,643,581 + ABIE41_RS17685 0.52 -1.1 3,643,582 - ABIE41_RS17685 0.52 +0.7 3,643,582 - ABIE41_RS17685 0.52 +0.6 3,643,582 - ABIE41_RS17685 0.52 -0.2 3,643,716 + ABIE41_RS17685 0.68 -0.6
Or see this region's nucleotide sequence