Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02040 and ABID97_RS02045 are separated by 281 nucleotides ABID97_RS02045 and ABID97_RS02050 are separated by 118 nucleotides
ABID97_RS02040: ABID97_RS02040 - glutathione peroxidase, at 409,819 to 410,331
_RS02040
ABID97_RS02045: ABID97_RS02045 - glutathione S-transferase N-terminal domain-containing protein, at 410,613 to 411,224
_RS02045
ABID97_RS02050: ABID97_RS02050 - adenylosuccinate lyase, at 411,343 to 412,723
_RS02050
Position (kb) 410
411
412 Strain fitness (log2 ratio) -2
-1
0
1 at 409.640 kb on + strand at 409.640 kb on + strand at 409.641 kb on - strand at 409.641 kb on - strand at 409.673 kb on - strand at 409.725 kb on + strand at 409.921 kb on + strand, within ABID97_RS02040 at 409.922 kb on - strand, within ABID97_RS02040 at 409.922 kb on - strand, within ABID97_RS02040 at 409.971 kb on + strand, within ABID97_RS02040 at 409.981 kb on + strand, within ABID97_RS02040 at 409.981 kb on + strand, within ABID97_RS02040 at 409.981 kb on + strand, within ABID97_RS02040 at 409.982 kb on - strand, within ABID97_RS02040 at 409.982 kb on - strand, within ABID97_RS02040 at 410.011 kb on + strand, within ABID97_RS02040 at 410.011 kb on + strand, within ABID97_RS02040 at 410.011 kb on + strand, within ABID97_RS02040 at 410.012 kb on - strand, within ABID97_RS02040 at 410.012 kb on - strand, within ABID97_RS02040 at 410.012 kb on - strand, within ABID97_RS02040 at 410.012 kb on - strand, within ABID97_RS02040 at 410.221 kb on + strand, within ABID97_RS02040 at 410.221 kb on + strand, within ABID97_RS02040 at 410.222 kb on - strand, within ABID97_RS02040 at 410.222 kb on - strand, within ABID97_RS02040 at 410.227 kb on + strand, within ABID97_RS02040 at 410.227 kb on + strand, within ABID97_RS02040 at 410.227 kb on + strand, within ABID97_RS02040 at 410.227 kb on + strand, within ABID97_RS02040 at 410.228 kb on - strand, within ABID97_RS02040 at 410.228 kb on - strand, within ABID97_RS02040 at 410.365 kb on + strand at 410.365 kb on + strand at 410.366 kb on - strand at 410.405 kb on - strand at 410.544 kb on + strand at 410.659 kb on + strand at 410.660 kb on - strand at 410.660 kb on - strand at 411.019 kb on + strand, within ABID97_RS02045 at 411.019 kb on + strand, within ABID97_RS02045 at 411.019 kb on + strand, within ABID97_RS02045 at 411.020 kb on - strand, within ABID97_RS02045 at 411.020 kb on - strand, within ABID97_RS02045 at 411.148 kb on + strand, within ABID97_RS02045 at 411.149 kb on - strand, within ABID97_RS02045 at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.249 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 409,640 + +0.9 409,640 + -0.6 409,641 - -0.2 409,641 - -0.3 409,673 - +0.3 409,725 + +0.3 409,921 + ABID97_RS02040 0.20 +0.7 409,922 - ABID97_RS02040 0.20 -0.5 409,922 - ABID97_RS02040 0.20 +0.4 409,971 + ABID97_RS02040 0.30 +0.4 409,981 + ABID97_RS02040 0.32 -0.4 409,981 + ABID97_RS02040 0.32 -0.5 409,981 + ABID97_RS02040 0.32 -0.1 409,982 - ABID97_RS02040 0.32 -0.4 409,982 - ABID97_RS02040 0.32 +0.0 410,011 + ABID97_RS02040 0.37 +0.1 410,011 + ABID97_RS02040 0.37 +0.2 410,011 + ABID97_RS02040 0.37 +0.9 410,012 - ABID97_RS02040 0.38 +0.1 410,012 - ABID97_RS02040 0.38 -0.1 410,012 - ABID97_RS02040 0.38 +0.5 410,012 - ABID97_RS02040 0.38 -0.4 410,221 + ABID97_RS02040 0.78 -0.0 410,221 + ABID97_RS02040 0.78 +0.1 410,222 - ABID97_RS02040 0.79 +0.5 410,222 - ABID97_RS02040 0.79 -0.2 410,227 + ABID97_RS02040 0.80 -1.5 410,227 + ABID97_RS02040 0.80 -0.1 410,227 + ABID97_RS02040 0.80 +0.4 410,227 + ABID97_RS02040 0.80 -0.1 410,228 - ABID97_RS02040 0.80 +0.1 410,228 - ABID97_RS02040 0.80 -0.0 410,365 + -0.3 410,365 + -0.5 410,366 - -0.7 410,405 - -0.9 410,544 + +1.1 410,659 + +0.7 410,660 - -0.7 410,660 - -0.1 411,019 + ABID97_RS02045 0.66 -0.7 411,019 + ABID97_RS02045 0.66 -0.7 411,019 + ABID97_RS02045 0.66 -0.6 411,020 - ABID97_RS02045 0.67 -0.3 411,020 - ABID97_RS02045 0.67 -0.3 411,148 + ABID97_RS02045 0.87 -0.7 411,149 - ABID97_RS02045 0.88 -0.3 411,193 + +0.5 411,193 + -0.2 411,193 + -0.7 411,193 + -0.6 411,193 + -0.9 411,193 + -1.0 411,194 - +0.6 411,194 - +1.1 411,194 - -1.8 411,194 - -0.2 411,194 - -0.5 411,194 - +0.2 411,249 + +0.3
Or see this region's nucleotide sequence