Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4787

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
5,338,224	+		PfGW456L13_4786	0.57	+0.6
5,338,224	+		PfGW456L13_4786	0.57	-0.6
5,338,225	-		PfGW456L13_4786	0.57	-1.1
5,338,225	-		PfGW456L13_4786	0.57	-1.7
5,338,225	-		PfGW456L13_4786	0.57	+0.8
5,338,225	-		PfGW456L13_4786	0.57	+0.3
5,338,284	-		PfGW456L13_4786	0.61	-0.8
5,338,297	+		PfGW456L13_4786	0.62	+0.4
5,338,297	+		PfGW456L13_4786	0.62	-1.1
5,338,362	+		PfGW456L13_4786	0.66	-1.9
5,338,363	-		PfGW456L13_4786	0.66	+1.8
5,338,363	-		PfGW456L13_4786	0.66	+1.5
5,338,363	-		PfGW456L13_4786	0.66	-0.4
5,338,376	+		PfGW456L13_4786	0.67	+0.4
5,338,443	+		PfGW456L13_4786	0.72	+0.7
5,338,444	-		PfGW456L13_4786	0.72	+0.8
5,338,444	-		PfGW456L13_4786	0.72	-0.0
5,338,444	-		PfGW456L13_4786	0.72	+0.2
5,338,485	+		PfGW456L13_4786	0.74	+0.7
5,338,486	-		PfGW456L13_4786	0.74	+0.5
5,338,491	+		PfGW456L13_4786	0.75	+1.6
5,338,491	+		PfGW456L13_4786	0.75	-0.8
5,338,491	+		PfGW456L13_4786	0.75	-0.0
5,338,521	+		PfGW456L13_4786	0.77	+1.3
5,338,522	-		PfGW456L13_4786	0.77	+0.9
5,338,572	+		PfGW456L13_4786	0.80	+0.6
5,338,573	-		PfGW456L13_4786	0.80	-1.6
5,338,677	+		PfGW456L13_4786	0.87	+0.0
5,338,755	+				-0.6
5,338,755	+				-0.9
5,338,755	+				-1.6
5,338,756	-				-3.4
5,338,756	-				-0.1
5,338,756	-				-0.1
5,338,788	+				+0.8
5,338,788	+				-1.2
5,338,788	+				-0.4
5,338,788	+				+0.2
5,338,788	+				+0.9
5,338,788	+				-2.0
5,338,788	+				+0.2
5,338,788	+				-2.2
5,338,788	+				-1.0
5,338,789	-				-0.9
5,338,789	-				-0.4
5,338,789	-				-0.6
5,338,789	-				+0.9
5,338,789	-				-0.4
5,338,789	-				-0.4
5,338,789	-				+0.4
5,338,789	-				+0.2
5,338,789	-				-0.6
5,338,789	-				-0.8
5,338,789	-				-0.2
5,338,789	-				+0.4
5,338,789	-				-0.0
5,338,789	-				-0.8
5,338,789	-				+2.8
5,338,919	-				+1.5
5,338,919	-				+0.5
5,338,919	-				+0.3
5,338,944	-				-0.6
5,338,944	-				-1.0
5,338,945	+				+0.1
5,338,945	+				-1.9
5,338,945	+				+1.2
5,338,945	+				-1.6
5,338,945	+				-0.3
5,338,945	+				+1.2
5,338,945	+				+0.2
5,338,945	+				-1.0
5,338,945	+				+1.1
5,338,946	-				-0.4
5,338,946	-				-2.1
5,338,946	-				+1.5
5,338,946	-				-0.3
5,338,946	-				+0.9
5,338,946	-				-1.7
5,338,946	-				+0.6
5,338,946	-				-2.1
5,338,946	-				+0.7
5,338,946	-				-0.2
5,338,959	-				+0.1
5,338,960	+				+0.4
5,338,960	+				-1.2
5,338,960	+				-1.7
5,338,961	-				+0.4
5,338,961	-				-0.4
5,338,961	-				-3.1
5,338,961	-				-0.6
5,338,961	-				-0.0
5,338,961	-				+0.3
5,339,077	+		PfGW456L13_4787	0.22	-0.0
5,339,077	+		PfGW456L13_4787	0.22	+0.7
5,339,077	+		PfGW456L13_4787	0.22	-1.0
5,339,077	+		PfGW456L13_4787	0.22	-0.4
5,339,077	+		PfGW456L13_4787	0.22	+0.5
5,339,077	+		PfGW456L13_4787	0.22	+2.8
5,339,077	+		PfGW456L13_4787	0.22	+0.4
5,339,077	+		PfGW456L13_4787	0.22	-0.0
5,339,078	-		PfGW456L13_4787	0.22	+0.5
5,339,078	-		PfGW456L13_4787	0.22	+1.6
5,339,078	-		PfGW456L13_4787	0.22	+1.8
5,339,078	-		PfGW456L13_4787	0.22	+1.0
5,339,078	-		PfGW456L13_4787	0.22	-1.0
5,339,078	-		PfGW456L13_4787	0.22	-2.6
5,339,078	-		PfGW456L13_4787	0.22	+1.3
5,339,078	-		PfGW456L13_4787	0.22	+0.3
5,339,078	-		PfGW456L13_4787	0.22	-0.2
5,339,086	+		PfGW456L13_4787	0.23	-0.4
5,339,122	+		PfGW456L13_4787	0.27	-0.0
5,339,122	+		PfGW456L13_4787	0.27	-2.1
5,339,122	+		PfGW456L13_4787	0.27	-0.7
5,339,122	+		PfGW456L13_4787	0.27	-0.0
5,339,123	-		PfGW456L13_4787	0.27	+1.5
5,339,123	-		PfGW456L13_4787	0.27	+0.8
5,339,123	-		PfGW456L13_4787	0.27	-1.4
5,339,247	+		PfGW456L13_4787	0.40	+0.7
5,339,248	-		PfGW456L13_4787	0.40	+0.9
5,339,289	+		PfGW456L13_4787	0.44	-0.2
5,339,289	+		PfGW456L13_4787	0.44	+1.2
5,339,289	+		PfGW456L13_4787	0.44	+0.6
5,339,289	+		PfGW456L13_4787	0.44	-1.9
5,339,289	+		PfGW456L13_4787	0.44	+1.3
5,339,290	-		PfGW456L13_4787	0.44	+0.0
5,339,290	-		PfGW456L13_4787	0.44	+1.1
5,339,290	-		PfGW456L13_4787	0.44	+1.7
5,339,290	-		PfGW456L13_4787	0.44	+1.2
5,339,290	-		PfGW456L13_4787	0.44	+0.4
5,339,290	-		PfGW456L13_4787	0.44	-0.5
5,339,378	-		PfGW456L13_4787	0.54	+1.0
5,339,378	-		PfGW456L13_4787	0.54	+0.7
5,339,401	+		PfGW456L13_4787	0.56	+1.3
5,339,431	+		PfGW456L13_4787	0.59	-1.2
5,339,431	+		PfGW456L13_4787	0.59	-0.6
5,339,467	-		PfGW456L13_4787	0.63	+0.4
5,339,660	+		PfGW456L13_4787	0.84	+0.4
5,339,661	-		PfGW456L13_4787	0.84	-0.2
5,339,661	-		PfGW456L13_4787	0.84	+0.6
5,339,703	+		PfGW456L13_4787	0.88	-0.6
5,339,703	+		PfGW456L13_4787	0.88	+0.4
5,339,703	+		PfGW456L13_4787	0.88	+1.3
5,339,704	-		PfGW456L13_4787	0.88	-0.5
5,339,704	-		PfGW456L13_4787	0.88	+0.6
5,339,704	-		PfGW456L13_4787	0.88	+1.3
5,339,704	-		PfGW456L13_4787	0.88	-0.7
5,339,728	-				-0.2
5,339,755	+				+0.4
5,339,756	-				-1.2
5,339,838	+				+1.8
5,339,838	+				-0.1
5,339,838	+				+0.5
5,339,838	+				-1.1
5,339,838	+				+1.4
5,339,839	-				-0.4
5,339,839	-				-0.2
5,339,839	-				-1.2
5,339,839	-				-2.1
5,339,847	+				+0.5
5,339,848	-		PfGW456L13_4788	0.10	+0.8
5,339,848	-		PfGW456L13_4788	0.10	-0.5
5,339,848	-		PfGW456L13_4788	0.10	+1.0
5,339,850	-		PfGW456L13_4788	0.11	+1.4
5,339,976	+		PfGW456L13_4788	0.44	-0.1
5,340,007	+		PfGW456L13_4788	0.53	-0.2
5,340,024	+		PfGW456L13_4788	0.57	-0.2
5,340,024	+		PfGW456L13_4788	0.57	+0.8
5,340,024	+		PfGW456L13_4788	0.57	+2.0
5,340,024	+		PfGW456L13_4788	0.57	+0.9
5,340,024	+		PfGW456L13_4788	0.57	+0.3
5,340,024	+		PfGW456L13_4788	0.57	-1.5
5,340,024	+		PfGW456L13_4788	0.57	+0.7
5,340,025	-		PfGW456L13_4788	0.57	-0.9
5,340,025	-		PfGW456L13_4788	0.57	+1.8
5,340,025	-		PfGW456L13_4788	0.57	-0.8
5,340,025	-		PfGW456L13_4788	0.57	+1.1
5,340,025	-		PfGW456L13_4788	0.57	-1.4
5,340,153	+				-2.2
5,340,153	+				-1.7
5,340,215	+				+0.8
5,340,216	-				-1.5
5,340,221	+				+1.5
5,340,221	+				-0.9
5,340,221	+				-0.4
5,340,221	+				-0.7
5,340,222	-				+0.3
5,340,235	+				+0.2
5,340,235	+				-1.8
5,340,236	-				+0.6
5,340,236	-				+2.2
5,340,244	-				+1.6
5,340,311	-				-2.1
5,340,311	-				+2.2
5,340,313	+				+0.2
5,340,536	+				-0.0
5,340,537	-				+0.3
5,340,604	-		PfGW456L13_4789	0.16	-0.6
5,340,675	+		PfGW456L13_4789	0.22	+0.7
5,340,675	+		PfGW456L13_4789	0.22	-1.5
5,340,675	+		PfGW456L13_4789	0.22	-0.7
5,340,675	+		PfGW456L13_4789	0.22	+0.2
5,340,676	-		PfGW456L13_4789	0.22	-0.9
5,340,676	-		PfGW456L13_4789	0.22	+0.3
5,340,686	+		PfGW456L13_4789	0.23	-0.9
5,340,686	+		PfGW456L13_4789	0.23	-1.0
5,340,686	+		PfGW456L13_4789	0.23	-0.8
5,340,686	+		PfGW456L13_4789	0.23	+0.6
5,340,686	+		PfGW456L13_4789	0.23	-0.5
5,340,687	-		PfGW456L13_4789	0.23	-1.4
5,340,687	-		PfGW456L13_4789	0.23	-0.1
5,340,687	-		PfGW456L13_4789	0.23	-0.8
5,340,687	-		PfGW456L13_4789	0.23	-1.6
5,340,687	-		PfGW456L13_4789	0.23	-1.6
5,340,687	-		PfGW456L13_4789	0.23	-0.2
5,340,687	-		PfGW456L13_4789	0.23	+0.3
5,340,687	-		PfGW456L13_4789	0.23	+0.4
5,340,687	-		PfGW456L13_4789	0.23	+1.2
5,340,687	-		PfGW456L13_4789	0.23	+1.3
5,340,687	-		PfGW456L13_4789	0.23	-2.4
5,340,687	-		PfGW456L13_4789	0.23	-2.1