Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4650

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
5,187,109	+				+1.1
5,187,109	+		PfGW456L13_4649	0.70	+1.4
5,187,164	+				+1.0
5,187,164	+				-2.6
5,187,164	+				+0.1
5,187,164	+				-0.5
5,187,165	-				-0.1
5,187,165	-				-2.0
5,187,165	-				+0.1
5,187,165	-				-1.0
5,187,165	-				-0.5
5,187,165	-				+1.0
5,187,165	-				-2.0
5,187,181	+				+1.0
5,187,181	+				-0.8
5,187,181	+				+0.2
5,187,182	-				+1.5
5,187,182	-				+0.7
5,187,182	-				-0.3
5,187,182	-				+2.3
5,187,182	-				-0.3
5,187,183	+				-1.1
5,187,185	+				+0.3
5,187,185	+				-0.1
5,187,186	-				+0.5
5,187,186	-				+0.7
5,187,186	-				+0.8
5,187,194	+				-1.8
5,187,195	-				+0.1
5,187,219	+				-0.8
5,187,331	-				+0.0
5,187,390	+				+2.1
5,187,390	+				+0.7
5,187,392	+				-0.5
5,187,393	-				-1.5
5,187,614	+				-1.3
5,187,615	-				+1.3
5,187,653	-				-0.5
5,187,699	-				-0.6
5,187,699	-				+0.4
5,187,701	-				-0.9
5,187,701	-				-0.6
5,187,701	-				+0.4
5,187,701	-				-0.3
5,187,701	-				-0.8
5,187,920	+				-1.0
5,187,920	+				+0.2
5,187,920	+				+0.9
5,187,920	+				-0.3
5,187,920	+				+1.7
5,187,920	+				-0.2
5,187,920	+				-0.8
5,187,921	-				-0.6
5,187,921	-				+0.2
5,187,921	-				-2.4
5,187,927	+				+0.0
5,187,928	-				-0.4
5,187,982	+				+0.7
5,187,983	-				+1.7
5,188,002	+				+1.0
5,188,013	-				+1.6
5,188,024	+				+0.0
5,188,024	+				+0.1
5,188,025	-				+0.1
5,188,038	-				-1.0
5,188,149	-				-1.1
5,188,149	-				+1.3
5,188,168	+				-0.2
5,188,168	+				+0.3
5,188,168	+				+0.2
5,188,168	+				-0.4
5,188,489	+		PfGW456L13_4650	0.16	+2.1
5,188,490	-		PfGW456L13_4650	0.16	+0.5
5,188,695	+		PfGW456L13_4650	0.23	+0.9
5,188,696	-		PfGW456L13_4650	0.23	+1.6
5,188,696	-		PfGW456L13_4650	0.23	-2.1
5,188,699	+		PfGW456L13_4650	0.24	+0.6
5,188,700	-		PfGW456L13_4650	0.24	+0.3
5,188,700	-		PfGW456L13_4650	0.24	-0.2
5,188,700	-		PfGW456L13_4650	0.24	+1.4
5,188,700	-		PfGW456L13_4650	0.24	-2.0
5,188,726	+		PfGW456L13_4650	0.25	-2.0
5,188,846	+		PfGW456L13_4650	0.29	+2.7
5,188,846	+		PfGW456L13_4650	0.29	+0.0
5,188,894	+		PfGW456L13_4650	0.31	+0.0
5,188,894	+		PfGW456L13_4650	0.31	+0.4
5,188,895	-		PfGW456L13_4650	0.31	+1.2
5,189,023	+		PfGW456L13_4650	0.36	-0.2
5,189,035	+		PfGW456L13_4650	0.36	+1.1
5,189,035	+		PfGW456L13_4650	0.36	+1.2
5,189,035	+		PfGW456L13_4650	0.36	-0.5
5,189,035	+		PfGW456L13_4650	0.36	+1.5
5,189,035	+		PfGW456L13_4650	0.36	-1.4
5,189,036	-		PfGW456L13_4650	0.36	+0.7
5,189,036	-		PfGW456L13_4650	0.36	-0.0
5,189,036	-		PfGW456L13_4650	0.36	+1.5
5,189,036	-		PfGW456L13_4650	0.36	-1.6
5,189,470	+		PfGW456L13_4650	0.53	-0.9
5,189,471	-		PfGW456L13_4650	0.53	+0.1
5,189,495	+		PfGW456L13_4650	0.54	-1.6
5,189,495	+		PfGW456L13_4650	0.54	+1.1
5,189,495	+		PfGW456L13_4650	0.54	+0.6
5,189,496	-		PfGW456L13_4650	0.54	+0.5
5,189,512	+		PfGW456L13_4650	0.54	-1.6
5,189,513	-		PfGW456L13_4650	0.54	-0.1
5,189,584	+		PfGW456L13_4650	0.57	-1.1
5,189,584	+		PfGW456L13_4650	0.57	-0.1
5,189,584	+		PfGW456L13_4650	0.57	+0.9
5,189,584	+		PfGW456L13_4650	0.57	-1.1
5,189,585	-		PfGW456L13_4650	0.57	+0.1
5,189,851	+		PfGW456L13_4650	0.67	+0.6
5,189,851	+		PfGW456L13_4650	0.67	-1.1
5,189,851	+		PfGW456L13_4650	0.67	+0.2
5,189,851	+		PfGW456L13_4650	0.67	+2.4
5,189,852	-		PfGW456L13_4650	0.67	-1.3
5,189,852	-		PfGW456L13_4650	0.67	-0.3
5,189,884	+		PfGW456L13_4650	0.68	+0.4
5,189,884	+		PfGW456L13_4650	0.68	-1.1
5,189,884	+		PfGW456L13_4650	0.68	-2.7
5,189,885	-		PfGW456L13_4650	0.68	+0.3
5,189,885	-		PfGW456L13_4650	0.68	+1.2
5,189,885	-		PfGW456L13_4650	0.68	+1.1
5,189,885	-		PfGW456L13_4650	0.68	-0.1
5,189,974	+		PfGW456L13_4650	0.72	-2.6
5,189,974	+		PfGW456L13_4650	0.72	-2.0
5,189,974	+		PfGW456L13_4650	0.72	-0.6
5,189,974	+		PfGW456L13_4650	0.72	+0.5
5,189,974	+		PfGW456L13_4650	0.72	-1.0
5,189,975	-		PfGW456L13_4650	0.72	+1.0
5,189,975	-		PfGW456L13_4650	0.72	-1.0
5,189,975	-		PfGW456L13_4650	0.72	+0.1
5,190,001	+		PfGW456L13_4650	0.73	-0.3
5,190,004	+		PfGW456L13_4650	0.73	-2.0
5,190,004	+		PfGW456L13_4650	0.73	-0.9
5,190,004	+		PfGW456L13_4650	0.73	+2.1
5,190,004	+		PfGW456L13_4650	0.73	-1.5
5,190,004	+		PfGW456L13_4650	0.73	-1.4
5,190,004	+		PfGW456L13_4650	0.73	-0.5
5,190,004	+		PfGW456L13_4650	0.73	-0.6
5,190,004	+		PfGW456L13_4650	0.73	-0.7
5,190,005	-		PfGW456L13_4650	0.73	+0.1
5,190,005	-		PfGW456L13_4650	0.73	+0.5
5,190,005	-		PfGW456L13_4650	0.73	+0.6
5,190,005	-		PfGW456L13_4650	0.73	-1.5
5,190,005	-		PfGW456L13_4650	0.73	+0.1
5,190,005	-		PfGW456L13_4650	0.73	+0.7
5,190,005	-		PfGW456L13_4650	0.73	+2.7
5,190,005	-		PfGW456L13_4650	0.73	-1.0
5,190,005	-		PfGW456L13_4650	0.73	-1.5
5,190,109	+		PfGW456L13_4650	0.77	-0.5
5,190,191	+		PfGW456L13_4650	0.80	-2.5
5,190,192	-		PfGW456L13_4650	0.80	+0.1
5,190,265	+		PfGW456L13_4650	0.83	-0.6
5,190,266	-		PfGW456L13_4650	0.83	+0.9
5,190,266	-		PfGW456L13_4650	0.83	+0.4
5,190,266	-		PfGW456L13_4650	0.83	+0.7
5,190,340	+		PfGW456L13_4650	0.86	+1.8
5,190,340	+		PfGW456L13_4650	0.86	+0.5
5,190,341	-		PfGW456L13_4650	0.86	-0.3
5,190,341	-		PfGW456L13_4650	0.86	+0.2
5,190,436	+		PfGW456L13_4650	0.89	+1.1
5,190,438	+		PfGW456L13_4650	0.89	+1.1
5,190,540	-				-2.0
5,190,562	+				-0.0
5,190,562	+				+1.2
5,190,562	+				-0.7
5,190,562	+				+1.3
5,190,562	+				-0.8
5,190,562	+				-0.5
5,190,562	+				+1.3
5,190,563	-				+0.1
5,190,563	-				+0.9
5,190,563	-				-2.3
5,190,563	-				-0.0
5,190,563	-				-1.1
5,190,622	+				-0.4
5,190,623	-				+0.2
5,190,623	-				+0.6
5,190,623	-				-1.5
5,190,623	-				+2.2
5,190,623	-				-1.7
5,190,623	-				+0.0
5,190,623	-				+0.7
5,190,623	-				-0.8
5,190,624	+				-1.8
5,190,624	+				-1.1
5,190,624	+				-1.7
5,190,624	+				-0.6
5,190,624	+				+1.5
5,190,625	-				-0.6
5,190,625	-				-0.6
5,190,625	-				-1.0
5,190,738	+				-1.1
5,190,738	+				+0.6
5,190,738	+				+0.9
5,190,738	+				-1.1
5,190,739	-				-0.4
5,190,739	-				-0.5
5,190,739	-				+1.1
5,190,739	-				+1.4
5,190,742	+				-0.5
5,190,742	+				-0.2
5,190,742	+				-1.9
5,190,742	+				-0.9
5,190,742	+				-1.6
5,190,742	+				-0.8
5,190,742	+				-1.2
5,190,742	+				+1.0
5,190,742	+				+0.2
5,190,742	+				-0.5
5,190,742	+				+0.2
5,190,742	+				-1.4
5,190,742	+				+0.3
5,190,743	-				-0.5
5,190,743	-				-0.0
5,190,743	-				-0.5
5,190,743	-				-0.9
5,190,743	-				+0.6
5,190,743	-				+1.1
5,190,743	-				-1.7
5,190,743	-				-0.1
5,190,743	-				+0.8
5,190,743	-				-0.6
5,190,743	-				-0.9
5,190,743	-				+0.3
5,190,743	-				+0.3
5,191,297	-		PfGW456L13_4651	0.43	+1.5
5,191,533	+		PfGW456L13_4651	0.62	+0.7
5,191,533	+		PfGW456L13_4651	0.62	-0.4
5,191,534	-		PfGW456L13_4651	0.62	+2.3
5,191,534	-		PfGW456L13_4651	0.62	+1.3
5,191,534	-		PfGW456L13_4651	0.62	-0.5
5,191,534	-		PfGW456L13_4651	0.62	-0.5
5,191,654	+		PfGW456L13_4651	0.71	+0.1
5,191,654	+		PfGW456L13_4651	0.71	+1.2
5,191,654	+		PfGW456L13_4651	0.71	-0.5
5,191,655	-		PfGW456L13_4651	0.71	-0.7
5,191,655	-		PfGW456L13_4651	0.71	+0.6
5,191,655	-		PfGW456L13_4651	0.71	+0.3
5,191,668	+		PfGW456L13_4651	0.72	+0.2
5,191,668	+		PfGW456L13_4651	0.72	-1.4
5,191,669	-		PfGW456L13_4651	0.73	-0.2
5,191,669	-		PfGW456L13_4651	0.73	-1.6
5,191,669	-		PfGW456L13_4651	0.73	+0.3