Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4339 and PfGW456L13_4340 overlap by 1 nucleotides PfGW456L13_4340 and PfGW456L13_4341 are separated by 0 nucleotides PfGW456L13_4341 and PfGW456L13_4342 are separated by 65 nucleotides
PfGW456L13_4339 - Flagellar biosynthesis protein FliP, at 4,851,742 to 4,852,500
_4339
PfGW456L13_4340 - Flagellar biosynthesis protein FliQ, at 4,852,500 to 4,852,943
_4340
PfGW456L13_4341 - Flagellar motor switch protein FliN, at 4,852,944 to 4,853,390
_4341
PfGW456L13_4342 - Flagellar motor switch protein FliM, at 4,853,456 to 4,854,424
_4342
Position (kb) 4852
4853
4854 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4852.329 kb on + strand, within PfGW456L13_4339 at 4852.330 kb on - strand at 4852.376 kb on + strand, within PfGW456L13_4339 at 4852.377 kb on - strand, within PfGW456L13_4339 at 4852.377 kb on - strand, within PfGW456L13_4339 at 4852.501 kb on + strand at 4852.502 kb on - strand at 4852.502 kb on - strand at 4852.502 kb on - strand at 4852.509 kb on - strand at 4852.920 kb on + strand at 4852.920 kb on + strand at 4852.921 kb on - strand at 4852.921 kb on - strand at 4853.431 kb on - strand at 4853.445 kb on - strand at 4853.892 kb on + strand at 4853.892 kb on + strand, within PfGW456L13_4342 at 4853.893 kb on - strand, within PfGW456L13_4342 at 4853.966 kb on + strand, within PfGW456L13_4342 at 4853.966 kb on + strand, within PfGW456L13_4342 at 4853.966 kb on + strand, within PfGW456L13_4342 at 4853.967 kb on - strand, within PfGW456L13_4342 at 4853.967 kb on - strand, within PfGW456L13_4342 at 4853.967 kb on - strand, within PfGW456L13_4342 at 4853.967 kb on - strand, within PfGW456L13_4342 at 4854.135 kb on + strand, within PfGW456L13_4342 at 4854.135 kb on + strand, within PfGW456L13_4342 at 4854.136 kb on - strand, within PfGW456L13_4342 at 4854.136 kb on - strand, within PfGW456L13_4342 at 4854.150 kb on + strand, within PfGW456L13_4342 at 4854.150 kb on + strand, within PfGW456L13_4342 at 4854.150 kb on + strand, within PfGW456L13_4342 at 4854.150 kb on + strand, within PfGW456L13_4342 at 4854.151 kb on - strand, within PfGW456L13_4342 at 4854.151 kb on - strand, within PfGW456L13_4342 at 4854.151 kb on - strand, within PfGW456L13_4342 at 4854.235 kb on - strand, within PfGW456L13_4342 at 4854.312 kb on + strand, within PfGW456L13_4342 at 4854.312 kb on + strand, within PfGW456L13_4342 at 4854.313 kb on - strand, within PfGW456L13_4342 at 4854.313 kb on - strand, within PfGW456L13_4342 at 4854.313 kb on - strand, within PfGW456L13_4342 at 4854.313 kb on - strand, within PfGW456L13_4342 at 4854.353 kb on + strand at 4854.353 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 4,852,329 + PfGW456L13_4339 0.77 -0.4 4,852,330 - +1.6 4,852,376 + PfGW456L13_4339 0.84 -0.0 4,852,377 - PfGW456L13_4339 0.84 +1.0 4,852,377 - PfGW456L13_4339 0.84 -1.1 4,852,501 + -0.3 4,852,502 - +0.6 4,852,502 - -1.4 4,852,502 - +2.1 4,852,509 - +1.0 4,852,920 + +0.1 4,852,920 + +0.6 4,852,921 - -0.6 4,852,921 - +0.3 4,853,431 - -0.4 4,853,445 - -1.2 4,853,892 + +2.6 4,853,892 + PfGW456L13_4342 0.45 -0.7 4,853,893 - PfGW456L13_4342 0.45 -0.6 4,853,966 + PfGW456L13_4342 0.53 -1.6 4,853,966 + PfGW456L13_4342 0.53 -2.0 4,853,966 + PfGW456L13_4342 0.53 +1.1 4,853,967 - PfGW456L13_4342 0.53 +0.2 4,853,967 - PfGW456L13_4342 0.53 +0.1 4,853,967 - PfGW456L13_4342 0.53 -0.7 4,853,967 - PfGW456L13_4342 0.53 -1.0 4,854,135 + PfGW456L13_4342 0.70 -1.3 4,854,135 + PfGW456L13_4342 0.70 -1.8 4,854,136 - PfGW456L13_4342 0.70 +0.2 4,854,136 - PfGW456L13_4342 0.70 +0.6 4,854,150 + PfGW456L13_4342 0.72 -1.0 4,854,150 + PfGW456L13_4342 0.72 -0.3 4,854,150 + PfGW456L13_4342 0.72 -0.1 4,854,150 + PfGW456L13_4342 0.72 -1.0 4,854,151 - PfGW456L13_4342 0.72 -0.9 4,854,151 - PfGW456L13_4342 0.72 -0.3 4,854,151 - PfGW456L13_4342 0.72 +0.2 4,854,235 - PfGW456L13_4342 0.80 +0.9 4,854,312 + PfGW456L13_4342 0.88 +0.2 4,854,312 + PfGW456L13_4342 0.88 +1.1 4,854,313 - PfGW456L13_4342 0.88 +0.9 4,854,313 - PfGW456L13_4342 0.88 +0.8 4,854,313 - PfGW456L13_4342 0.88 +0.2 4,854,313 - PfGW456L13_4342 0.88 -0.6 4,854,353 + -1.4 4,854,353 + -0.1
Or see this region's nucleotide sequence