Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2877

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
3,204,331	+		PfGW456L13_2876	0.41	+0.9
3,204,356	-		PfGW456L13_2876	0.43	-1.9
3,204,356	-		PfGW456L13_2876	0.43	+0.8
3,204,434	+		PfGW456L13_2876	0.48	+1.2
3,204,434	+		PfGW456L13_2876	0.48	+0.7
3,204,434	+		PfGW456L13_2876	0.48	+1.0
3,204,434	+		PfGW456L13_2876	0.48	-0.3
3,204,434	+		PfGW456L13_2876	0.48	+0.7
3,204,434	+		PfGW456L13_2876	0.48	-2.0
3,204,435	-		PfGW456L13_2876	0.48	-1.5
3,204,435	-		PfGW456L13_2876	0.48	-0.2
3,204,435	-		PfGW456L13_2876	0.48	+0.5
3,204,435	-		PfGW456L13_2876	0.48	-2.1
3,204,435	-		PfGW456L13_2876	0.48	-0.3
3,204,435	-		PfGW456L13_2876	0.48	-0.4
3,204,453	-		PfGW456L13_2876	0.49	+1.1
3,204,453	-		PfGW456L13_2876	0.49	+2.0
3,204,509	+		PfGW456L13_2876	0.53	-0.9
3,204,509	+		PfGW456L13_2876	0.53	-0.9
3,204,509	+		PfGW456L13_2876	0.53	-2.3
3,204,510	-		PfGW456L13_2876	0.53	-0.2
3,204,517	+		PfGW456L13_2876	0.53	-0.9
3,204,517	+		PfGW456L13_2876	0.53	+0.3
3,204,517	+		PfGW456L13_2876	0.53	-0.1
3,204,517	+		PfGW456L13_2876	0.53	+0.2
3,204,517	+		PfGW456L13_2876	0.53	-1.3
3,204,517	+		PfGW456L13_2876	0.53	-2.8
3,204,517	+		PfGW456L13_2876	0.53	-2.4
3,204,517	+		PfGW456L13_2876	0.53	+0.3
3,204,517	+		PfGW456L13_2876	0.53	+1.2
3,204,517	+		PfGW456L13_2876	0.53	-2.1
3,204,517	+		PfGW456L13_2876	0.53	+0.2
3,204,517	+		PfGW456L13_2876	0.53	+1.2
3,204,517	+		PfGW456L13_2876	0.53	-0.8
3,204,517	+		PfGW456L13_2876	0.53	+0.5
3,204,517	+		PfGW456L13_2876	0.53	+0.9
3,204,517	+		PfGW456L13_2876	0.53	+0.5
3,204,517	+		PfGW456L13_2876	0.53	+0.2
3,204,518	-		PfGW456L13_2876	0.53	+2.9
3,204,518	-		PfGW456L13_2876	0.53	-1.0
3,204,518	-		PfGW456L13_2876	0.53	+1.2
3,204,518	-		PfGW456L13_2876	0.53	+0.1
3,204,518	-		PfGW456L13_2876	0.53	-0.5
3,204,518	-		PfGW456L13_2876	0.53	+0.3
3,204,518	-		PfGW456L13_2876	0.53	+0.1
3,204,518	-		PfGW456L13_2876	0.53	-0.5
3,204,519	+		PfGW456L13_2876	0.53	+0.7
3,204,519	+		PfGW456L13_2876	0.53	+1.7
3,204,519	+		PfGW456L13_2876	0.53	-0.2
3,204,519	+		PfGW456L13_2876	0.53	-0.7
3,204,519	+		PfGW456L13_2876	0.53	-1.7
3,204,520	-		PfGW456L13_2876	0.53	-0.3
3,204,520	-		PfGW456L13_2876	0.53	-1.0
3,204,520	-		PfGW456L13_2876	0.53	+0.1
3,204,520	-		PfGW456L13_2876	0.53	-2.2
3,204,642	-		PfGW456L13_2876	0.61	-0.6
3,204,642	-		PfGW456L13_2876	0.61	+0.7
3,204,642	-		PfGW456L13_2876	0.61	-2.2
3,204,852	-		PfGW456L13_2876	0.74	-0.6
3,205,255	+				+0.4
3,205,255	+				-1.6
3,205,255	+				+0.5
3,205,255	+				+0.4
3,205,499	-		PfGW456L13_2877	0.22	-0.0
3,205,499	-		PfGW456L13_2877	0.22	-1.2
3,205,588	+		PfGW456L13_2877	0.31	+1.0
3,205,588	+		PfGW456L13_2877	0.31	-0.0
3,205,589	-		PfGW456L13_2877	0.31	+1.4
3,205,720	+		PfGW456L13_2877	0.44	-0.7
3,205,720	+		PfGW456L13_2877	0.44	+0.4
3,205,720	+		PfGW456L13_2877	0.44	-0.2
3,205,720	+		PfGW456L13_2877	0.44	-0.9
3,205,721	-		PfGW456L13_2877	0.44	-1.4
3,205,721	-		PfGW456L13_2877	0.44	+0.6
3,205,721	-		PfGW456L13_2877	0.44	+0.2
3,205,721	-				-0.0
3,205,789	+		PfGW456L13_2877	0.51	-1.2
3,205,789	+		PfGW456L13_2877	0.51	+0.9
3,205,789	+		PfGW456L13_2877	0.51	+0.5
3,205,969	+		PfGW456L13_2877	0.68	+0.7
3,205,969	+		PfGW456L13_2877	0.68	-1.9
3,205,969	+		PfGW456L13_2877	0.68	-0.6
3,205,969	+		PfGW456L13_2877	0.68	+1.5
3,205,970	-		PfGW456L13_2877	0.69	-1.3
3,206,047	+		PfGW456L13_2877	0.76	+0.2
3,206,047	+		PfGW456L13_2877	0.76	-0.9
3,206,047	+		PfGW456L13_2877	0.76	+0.6
3,206,047	+		PfGW456L13_2877	0.76	+0.3
3,206,048	-		PfGW456L13_2877	0.76	+0.5
3,206,048	-		PfGW456L13_2877	0.76	-1.2
3,206,048	-		PfGW456L13_2877	0.76	+1.0
3,206,125	+		PfGW456L13_2877	0.84	+1.7
3,206,125	+		PfGW456L13_2877	0.84	+0.6
3,206,125	+		PfGW456L13_2877	0.84	-1.0
3,206,126	-		PfGW456L13_2877	0.84	-1.8
3,206,126	-		PfGW456L13_2877	0.84	+1.3
3,206,126	-		PfGW456L13_2877	0.84	+2.1
3,206,140	+		PfGW456L13_2877	0.85	+3.0
3,206,141	-		PfGW456L13_2877	0.85	-1.0
3,206,141	-		PfGW456L13_2877	0.85	+0.5
3,206,337	+				-0.7
3,206,338	-				+1.0
3,206,338	-				-0.3
3,206,413	-		PfGW456L13_2878	0.11	+1.5
3,206,424	-		PfGW456L13_2878	0.13	+0.4
3,206,436	+		PfGW456L13_2878	0.14	-0.0
3,206,436	+		PfGW456L13_2878	0.14	-0.5
3,206,436	+		PfGW456L13_2878	0.14	+0.1
3,206,436	+		PfGW456L13_2878	0.14	+1.4
3,206,437	-		PfGW456L13_2878	0.14	-1.0
3,206,437	-		PfGW456L13_2878	0.14	-0.1
3,206,540	+		PfGW456L13_2878	0.23	-0.8
3,206,540	+		PfGW456L13_2878	0.23	-0.3
3,206,541	-		PfGW456L13_2878	0.24	-2.8
3,206,541	-		PfGW456L13_2878	0.24	-1.0
3,206,541	-		PfGW456L13_2878	0.24	-2.2
3,206,612	+		PfGW456L13_2878	0.30	+1.3
3,206,612	+		PfGW456L13_2878	0.30	+0.2
3,206,612	+		PfGW456L13_2878	0.30	-0.5
3,206,613	-		PfGW456L13_2878	0.30	+0.1
3,206,613	-		PfGW456L13_2878	0.30	-0.6
3,206,613	-		PfGW456L13_2878	0.30	+0.3
3,206,616	+		PfGW456L13_2878	0.31	+1.0
3,206,616	+		PfGW456L13_2878	0.31	+0.2
3,206,617	-		PfGW456L13_2878	0.31	-0.4
3,206,617	-		PfGW456L13_2878	0.31	-0.4
3,206,617	-		PfGW456L13_2878	0.31	+1.0
3,206,721	+				+1.3
3,206,721	+		PfGW456L13_2878	0.40	-0.5
3,206,722	-		PfGW456L13_2878	0.41	-0.7
3,206,859	+		PfGW456L13_2878	0.53	+0.4
3,206,949	+		PfGW456L13_2878	0.62	-0.2
3,206,950	-		PfGW456L13_2878	0.62	-0.9
3,206,950	-		PfGW456L13_2878	0.62	-0.0
3,206,950	-		PfGW456L13_2878	0.62	+0.6
3,207,063	+		PfGW456L13_2878	0.73	-0.6
3,207,064	-		PfGW456L13_2878	0.73	-1.4
3,207,114	+				+1.0
3,207,115	-		PfGW456L13_2878	0.78	+0.5