Strain Fitness in Pseudomonas sp. S08-1 around OH686_19135

Experiment: Sorgoleone (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sorgoleone (C)
3,949,148	+		OH686_19125	0.39	-2.2
3,949,148	+		OH686_19125	0.39	-1.8
3,949,148	+		OH686_19125	0.39	+0.0
3,949,148	+		OH686_19125	0.39	-0.8
3,949,149	-		OH686_19125	0.39	-0.0
3,949,149	-		OH686_19125	0.39	-0.8
3,949,149	-		OH686_19125	0.39	-0.4
3,949,149	-		OH686_19125	0.39	-1.0
3,949,149	-		OH686_19125	0.39	-0.2
3,949,149	-		OH686_19125	0.39	-0.2
3,949,184	+		OH686_19125	0.46	+0.1
3,949,185	-		OH686_19125	0.46	+0.5
3,949,185	-		OH686_19125	0.46	-0.4
3,949,185	-		OH686_19125	0.46	-0.2
3,949,185	-		OH686_19125	0.46	+0.2
3,949,208	+		OH686_19125	0.50	-0.8
3,949,247	-		OH686_19125	0.58	-3.2
3,949,307	+		OH686_19125	0.69	-1.0
3,949,307	+		OH686_19125	0.69	-1.8
3,949,307	+		OH686_19125	0.69	-3.2
3,949,308	-		OH686_19125	0.70	+0.5
3,949,308	-		OH686_19125	0.70	-0.5
3,949,308	-		OH686_19125	0.70	-0.4
3,949,308	-		OH686_19125	0.70	+0.2
3,949,308	-		OH686_19125	0.70	+0.8
3,949,466	-				-0.4
3,949,591	+		OH686_19130	0.17	-1.0
3,949,666	+		OH686_19130	0.30	+0.5
3,949,666	+		OH686_19130	0.30	-0.2
3,950,089	+				-0.6
3,950,089	+				+0.9
3,950,089	+				-0.5
3,950,089	+				-0.6
3,950,090	-				-1.0
3,950,090	-				-0.9
3,950,090	-				-0.8
3,950,090	-				-0.2
3,950,099	+				-0.1
3,950,099	+				+0.1
3,950,185	+				-1.3
3,950,185	+				-1.4
3,950,186	-				+0.2
3,950,186	-				-0.7
3,950,313	+		OH686_19135	0.21	+1.8
3,950,314	-		OH686_19135	0.21	+1.6
3,950,336	+		OH686_19135	0.23	-1.0
3,950,336	+		OH686_19135	0.23	+0.5
3,950,473	+		OH686_19135	0.36	-0.9
3,950,644	+		OH686_19135	0.52	-1.3
3,950,644	+		OH686_19135	0.52	-2.3
3,950,644	+		OH686_19135	0.52	-0.1
3,950,897	+		OH686_19135	0.76	+1.1
3,950,897	+		OH686_19135	0.76	-1.4
3,950,897	+		OH686_19135	0.76	-0.4
3,950,897	+		OH686_19135	0.76	-0.4
3,950,898	-		OH686_19135	0.76	-0.9
3,950,898	-		OH686_19135	0.76	-0.5
3,950,898	-		OH686_19135	0.76	-0.2
3,951,004	+		OH686_19135	0.86	+1.0
3,951,005	-		OH686_19135	0.86	-0.2
3,951,005	-		OH686_19135	0.86	-1.4
3,951,022	+		OH686_19135	0.88	-0.2
3,951,022	+		OH686_19135	0.88	+0.8
3,951,022	+		OH686_19135	0.88	-0.1
3,951,022	+		OH686_19135	0.88	-0.9
3,951,022	+		OH686_19135	0.88	-1.8
3,951,022	+		OH686_19135	0.88	-0.8
3,951,022	+		OH686_19135	0.88	-1.4
3,951,022	+		OH686_19135	0.88	+0.2
3,951,022	+		OH686_19135	0.88	-1.2
3,951,023	-		OH686_19135	0.88	+0.8
3,951,023	-		OH686_19135	0.88	-1.0
3,951,023	-		OH686_19135	0.88	-1.7
3,951,023	-		OH686_19135	0.88	-0.9
3,951,023	-		OH686_19135	0.88	-0.4
3,951,023	-		OH686_19135	0.88	-0.5
3,951,023	-		OH686_19135	0.88	-0.7
3,951,023	-		OH686_19135	0.88	-0.2
3,951,023	-		OH686_19135	0.88	-1.0
3,951,023	-		OH686_19135	0.88	+1.4
3,951,023	-		OH686_19135	0.88	-0.2
3,951,023	-		OH686_19135	0.88	-1.0
3,951,023	-		OH686_19135	0.88	-0.4
3,951,024	+		OH686_19135	0.88	-1.0
3,951,024	+		OH686_19135	0.88	-0.0
3,951,024	+		OH686_19135	0.88	-0.5
3,951,024	+		OH686_19135	0.88	+0.2
3,951,024	+		OH686_19135	0.88	-0.0
3,951,025	-		OH686_19135	0.88	-0.8
3,951,025	-		OH686_19135	0.88	-0.8
3,951,025	-		OH686_19135	0.88	+0.5
3,951,025	-		OH686_19135	0.88	-0.2
3,951,025	-		OH686_19135	0.88	+0.8
3,951,025	-		OH686_19135	0.88	-0.2
3,951,025	-		OH686_19135	0.88	-1.5
3,951,067	+				-1.4
3,951,068	-				+0.4
3,951,068	-				-1.1
3,951,068	-				-2.5
3,951,068	-				-0.5
3,951,145	+				-0.1
3,951,145	+				-1.0
3,951,146	-				+0.2
3,951,146	-				+0.3
3,951,146	-				+0.8
3,951,146	-				+0.3
3,951,188	+				+1.4
3,951,188	+				-1.3
3,951,189	-				+0.8
3,951,195	+				-0.8
3,951,195	+				-0.5
3,951,195	+				-0.6
3,951,195	+				-1.1
3,951,195	+				+0.1
3,951,195	+				+0.2
3,951,195	+				+0.2
3,951,196	-				+0.3
3,951,196	-				+0.5
3,951,196	-				-0.7
3,951,196	-				-0.5
3,951,196	-				+0.1
3,951,196	-				+0.9
3,951,196	-				+0.8
3,951,200	+				-0.0
3,951,200	+				-1.5
3,951,200	+				-0.2
3,951,200	+				+0.2
3,951,200	+				+0.6
3,951,249	+		OH686_19140	0.11	-0.3
3,951,249	+		OH686_19140	0.11	+0.1
3,951,249	+		OH686_19140	0.11	+0.3
3,951,249	+		OH686_19140	0.11	-1.0
3,951,250	-		OH686_19140	0.11	-1.1
3,951,250	-		OH686_19140	0.11	+0.4
3,951,250	-		OH686_19140	0.11	+0.1
3,951,250	-		OH686_19140	0.11	+0.1
3,951,252	+		OH686_19140	0.11	-0.1
3,951,253	-		OH686_19140	0.12	-0.1
3,951,253	-		OH686_19140	0.12	-0.5
3,951,253	-		OH686_19140	0.12	-0.8
3,951,253	-		OH686_19140	0.12	-0.5
3,951,282	+		OH686_19140	0.18	-0.5
3,951,282	+		OH686_19140	0.18	-0.5
3,951,282	+		OH686_19140	0.18	-0.3
3,951,282	+		OH686_19140	0.18	+0.1
3,951,282	+		OH686_19140	0.18	+1.5
3,951,282	+		OH686_19140	0.18	-1.0
3,951,282	+		OH686_19140	0.18	-0.1
3,951,282	+		OH686_19140	0.18	+0.0
3,951,283	-		OH686_19140	0.18	-0.4
3,951,283	-		OH686_19140	0.18	+1.4
3,951,285	+		OH686_19140	0.19	-0.4
3,951,285	+		OH686_19140	0.19	-3.1
3,951,285	+		OH686_19140	0.19	+0.0
3,951,285	+		OH686_19140	0.19	-0.8
3,951,285	+		OH686_19140	0.19	-1.7
3,951,285	+		OH686_19140	0.19	-0.5
3,951,285	+		OH686_19140	0.19	+0.2
3,951,285	+		OH686_19140	0.19	-0.1
3,951,286	-		OH686_19140	0.19	-0.4
3,951,286	-		OH686_19140	0.19	-0.2
3,951,286	-		OH686_19140	0.19	+0.4
3,951,286	-		OH686_19140	0.19	+0.2
3,951,286	-		OH686_19140	0.19	-0.5
3,951,286	-		OH686_19140	0.19	-0.6
3,951,286	-		OH686_19140	0.19	-0.3
3,951,286	-		OH686_19140	0.19	-0.1
3,951,286	-		OH686_19140	0.19	-0.9
3,951,286	-		OH686_19140	0.19	-0.2
3,951,286	-		OH686_19140	0.19	+0.4
3,951,286	-		OH686_19140	0.19	+2.1
3,951,286	-		OH686_19140	0.19	+0.5
3,951,286	-		OH686_19140	0.19	-0.4
3,951,294	+		OH686_19140	0.21	+0.5
3,951,295	-		OH686_19140	0.21	+0.6
3,951,295	-		OH686_19140	0.21	+1.2
3,951,295	-		OH686_19140	0.21	-0.4
3,951,409	-		OH686_19140	0.47	+0.8
3,951,443	+		OH686_19140	0.55	+1.2
3,951,444	-		OH686_19140	0.55	+0.7
3,951,444	-		OH686_19140	0.55	+0.8
3,951,444	-		OH686_19140	0.55	-0.5
3,951,444	-		OH686_19140	0.55	-1.1
3,951,457	+		OH686_19140	0.58	+0.4
3,951,457	+		OH686_19140	0.58	-0.4
3,951,458	-		OH686_19140	0.58	+0.1
3,951,458	-		OH686_19140	0.58	+0.1
3,951,458	-		OH686_19140	0.58	+0.1
3,951,458	-		OH686_19140	0.58	-0.7
3,951,458	-		OH686_19140	0.58	+0.4
3,951,467	-		OH686_19140	0.60	+0.7
3,951,467	-		OH686_19140	0.60	-0.4
3,951,467	-		OH686_19140	0.60	+0.3
3,951,500	-		OH686_19140	0.67	+0.1
3,951,500	-		OH686_19140	0.67	+0.9