Experiment: Sorgoleone (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_15755 and OH686_15760 are separated by 362 nucleotides OH686_15760 and OH686_15765 are separated by 81 nucleotides
OH686_15755: OH686_15755 - Outer membrane vitamin B12 receptor BtuB, at 3,282,204 to 3,284,090
_15755
OH686_15760: OH686_15760 - 1-deoxy-D-xylulose-5-phosphate synthase, at 3,284,453 to 3,286,348
_15760
OH686_15765: OH686_15765 - Epoxide hydrolase , at 3,286,430 to 3,287,380
_15765
Position (kb)
3284
3285
3286
3287 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3283.454 kb on - strand, within OH686_15755 at 3283.573 kb on + strand, within OH686_15755 at 3283.573 kb on + strand, within OH686_15755 at 3283.660 kb on + strand, within OH686_15755 at 3283.660 kb on + strand, within OH686_15755 at 3283.660 kb on + strand, within OH686_15755 at 3283.660 kb on + strand, within OH686_15755 at 3283.660 kb on + strand, within OH686_15755 at 3283.661 kb on - strand, within OH686_15755 at 3283.810 kb on + strand, within OH686_15755 at 3283.810 kb on + strand, within OH686_15755 at 3283.810 kb on + strand, within OH686_15755 at 3283.810 kb on + strand, within OH686_15755 at 3283.811 kb on - strand, within OH686_15755 at 3283.811 kb on - strand, within OH686_15755 at 3283.811 kb on - strand, within OH686_15755 at 3283.811 kb on - strand, within OH686_15755 at 3283.811 kb on - strand, within OH686_15755 at 3283.811 kb on - strand, within OH686_15755 at 3283.860 kb on + strand, within OH686_15755 at 3283.860 kb on + strand, within OH686_15755 at 3283.861 kb on - strand, within OH686_15755 at 3283.872 kb on + strand, within OH686_15755 at 3283.872 kb on + strand, within OH686_15755 at 3283.872 kb on + strand, within OH686_15755 at 3283.873 kb on - strand, within OH686_15755 at 3283.873 kb on - strand, within OH686_15755 at 3283.873 kb on - strand, within OH686_15755 at 3284.282 kb on + strand at 3284.339 kb on + strand at 3284.396 kb on + strand at 3284.396 kb on + strand at 3284.396 kb on + strand at 3284.396 kb on + strand at 3284.396 kb on + strand at 3284.396 kb on + strand at 3284.396 kb on + strand at 3284.396 kb on + strand at 3284.397 kb on - strand at 3284.397 kb on - strand at 3284.416 kb on + strand at 3284.416 kb on + strand at 3286.363 kb on + strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.369 kb on + strand at 3286.369 kb on + strand at 3286.369 kb on + strand at 3286.369 kb on + strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.388 kb on + strand at 3286.388 kb on + strand at 3286.389 kb on - strand at 3286.443 kb on + strand at 3286.443 kb on + strand at 3286.444 kb on - strand at 3286.737 kb on + strand, within OH686_15765 at 3286.737 kb on + strand, within OH686_15765 at 3286.738 kb on - strand, within OH686_15765 at 3286.920 kb on + strand, within OH686_15765 at 3286.920 kb on + strand, within OH686_15765 at 3286.921 kb on - strand, within OH686_15765 at 3286.921 kb on - strand, within OH686_15765 at 3286.921 kb on - strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.948 kb on - strand, within OH686_15765 at 3286.948 kb on - strand, within OH686_15765 at 3286.948 kb on - strand, within OH686_15765 at 3287.157 kb on + strand, within OH686_15765 at 3287.158 kb on - strand, within OH686_15765 at 3287.158 kb on - strand, within OH686_15765 at 3287.265 kb on + strand, within OH686_15765 at 3287.266 kb on - strand, within OH686_15765 at 3287.266 kb on - strand, within OH686_15765 at 3287.328 kb on + strand at 3287.328 kb on + strand at 3287.328 kb on + strand at 3287.328 kb on + strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sorgoleone (C) remove 3,283,454 - OH686_15755 0.66 +0.1 3,283,573 + OH686_15755 0.73 +0.1 3,283,573 + OH686_15755 0.73 +0.4 3,283,660 + OH686_15755 0.77 +0.1 3,283,660 + OH686_15755 0.77 -0.8 3,283,660 + OH686_15755 0.77 +0.3 3,283,660 + OH686_15755 0.77 +0.4 3,283,660 + OH686_15755 0.77 +0.7 3,283,661 - OH686_15755 0.77 -0.7 3,283,810 + OH686_15755 0.85 -0.4 3,283,810 + OH686_15755 0.85 +0.1 3,283,810 + OH686_15755 0.85 -0.8 3,283,810 + OH686_15755 0.85 -1.8 3,283,811 - OH686_15755 0.85 -0.2 3,283,811 - OH686_15755 0.85 -0.8 3,283,811 - OH686_15755 0.85 -0.3 3,283,811 - OH686_15755 0.85 -1.0 3,283,811 - OH686_15755 0.85 -0.3 3,283,811 - OH686_15755 0.85 -0.3 3,283,860 + OH686_15755 0.88 -0.8 3,283,860 + OH686_15755 0.88 -0.8 3,283,861 - OH686_15755 0.88 +0.0 3,283,872 + OH686_15755 0.88 +0.4 3,283,872 + OH686_15755 0.88 +0.1 3,283,872 + OH686_15755 0.88 -0.6 3,283,873 - OH686_15755 0.88 +0.9 3,283,873 - OH686_15755 0.88 +0.1 3,283,873 - OH686_15755 0.88 -0.4 3,284,282 + -0.1 3,284,339 + +0.5 3,284,396 + -0.4 3,284,396 + -0.2 3,284,396 + -0.2 3,284,396 + -0.6 3,284,396 + -0.5 3,284,396 + +0.2 3,284,396 + -0.6 3,284,396 + +0.4 3,284,397 - +0.4 3,284,397 - -1.6 3,284,416 + -1.2 3,284,416 + +0.0 3,286,363 + -0.8 3,286,364 - -0.3 3,286,364 - +0.4 3,286,364 - -0.7 3,286,364 - +2.2 3,286,364 - +0.2 3,286,364 - -0.1 3,286,364 - -0.2 3,286,364 - +0.3 3,286,364 - -0.4 3,286,364 - -0.8 3,286,369 + -0.7 3,286,369 + -1.4 3,286,369 + -1.0 3,286,369 + -0.8 3,286,370 - -0.4 3,286,370 - -1.0 3,286,370 - +0.2 3,286,370 - -0.9 3,286,370 - -0.2 3,286,370 - +0.2 3,286,370 - -1.0 3,286,370 - +0.0 3,286,388 + -1.6 3,286,388 + +0.8 3,286,389 - +0.1 3,286,443 + -0.2 3,286,443 + -0.9 3,286,444 - -1.4 3,286,737 + OH686_15765 0.32 +0.2 3,286,737 + OH686_15765 0.32 +1.1 3,286,738 - OH686_15765 0.32 -0.0 3,286,920 + OH686_15765 0.52 +0.5 3,286,920 + OH686_15765 0.52 -0.0 3,286,921 - OH686_15765 0.52 +0.1 3,286,921 - OH686_15765 0.52 -0.4 3,286,921 - OH686_15765 0.52 -0.4 3,286,929 + OH686_15765 0.52 -0.4 3,286,929 + OH686_15765 0.52 +0.3 3,286,929 + OH686_15765 0.52 +1.0 3,286,929 + OH686_15765 0.52 -0.7 3,286,929 + OH686_15765 0.52 +0.1 3,286,930 - OH686_15765 0.53 +0.8 3,286,930 - OH686_15765 0.53 +0.1 3,286,930 - OH686_15765 0.53 -1.6 3,286,930 - OH686_15765 0.53 +0.9 3,286,930 - OH686_15765 0.53 -1.3 3,286,930 - OH686_15765 0.53 -0.4 3,286,930 - OH686_15765 0.53 +0.5 3,286,930 - OH686_15765 0.53 +0.1 3,286,930 - OH686_15765 0.53 -1.0 3,286,947 + OH686_15765 0.54 +0.4 3,286,947 + OH686_15765 0.54 -0.1 3,286,947 + OH686_15765 0.54 -0.9 3,286,947 + OH686_15765 0.54 +0.3 3,286,948 - OH686_15765 0.54 +0.3 3,286,948 - OH686_15765 0.54 -0.4 3,286,948 - OH686_15765 0.54 +0.7 3,287,157 + OH686_15765 0.76 -0.6 3,287,158 - OH686_15765 0.77 +0.2 3,287,158 - OH686_15765 0.77 -0.8 3,287,265 + OH686_15765 0.88 -1.0 3,287,266 - OH686_15765 0.88 +0.0 3,287,266 - OH686_15765 0.88 +0.5 3,287,328 + +0.4 3,287,328 + -0.5 3,287,328 + +0.0 3,287,328 + -0.5 3,287,329 - -0.1 3,287,329 - -0.3 3,287,329 - -0.6 3,287,329 - +0.2 3,287,329 - -0.5 3,287,329 - +0.2
Or see this region's nucleotide sequence