Experiment: Sorgoleone (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03625 and OH686_03630 are separated by 176 nucleotides OH686_03630 and OH686_03635 are separated by 136 nucleotides
OH686_03625: OH686_03625 - Peptidyl-prolyl cis-trans isomerase PpiD , at 749,570 to 751,426
_03625
OH686_03630: OH686_03630 - DNA-binding protein HU-beta, at 751,603 to 751,875
_03630
OH686_03635: OH686_03635 - endopeptidase La, at 752,012 to 754,408
_03635
Position (kb) 751
752 Strain fitness (log2 ratio) -2
-1
0
1
2 at 750.666 kb on + strand, within OH686_03625 at 750.666 kb on + strand, within OH686_03625 at 750.666 kb on + strand, within OH686_03625 at 750.666 kb on + strand, within OH686_03625 at 750.667 kb on - strand, within OH686_03625 at 750.667 kb on - strand, within OH686_03625 at 750.667 kb on - strand, within OH686_03625 at 750.667 kb on - strand, within OH686_03625 at 750.667 kb on - strand, within OH686_03625 at 750.735 kb on + strand, within OH686_03625 at 750.736 kb on - strand, within OH686_03625 at 750.736 kb on - strand, within OH686_03625 at 750.736 kb on - strand, within OH686_03625 at 750.786 kb on + strand, within OH686_03625 at 750.786 kb on + strand, within OH686_03625 at 750.786 kb on + strand, within OH686_03625 at 750.786 kb on + strand, within OH686_03625 at 750.786 kb on + strand, within OH686_03625 at 750.786 kb on + strand, within OH686_03625 at 750.786 kb on + strand, within OH686_03625 at 750.787 kb on - strand, within OH686_03625 at 750.787 kb on - strand, within OH686_03625 at 750.789 kb on + strand, within OH686_03625 at 750.789 kb on + strand, within OH686_03625 at 750.789 kb on + strand, within OH686_03625 at 750.790 kb on - strand, within OH686_03625 at 750.790 kb on - strand, within OH686_03625 at 750.953 kb on + strand, within OH686_03625 at 750.953 kb on + strand, within OH686_03625 at 750.953 kb on + strand, within OH686_03625 at 750.953 kb on + strand, within OH686_03625 at 750.953 kb on + strand, within OH686_03625 at 750.954 kb on - strand, within OH686_03625 at 750.954 kb on - strand, within OH686_03625 at 751.091 kb on - strand, within OH686_03625 at 751.138 kb on + strand, within OH686_03625 at 751.139 kb on - strand, within OH686_03625 at 751.523 kb on + strand at 751.524 kb on - strand at 751.911 kb on - strand at 751.911 kb on - strand at 751.924 kb on - strand at 751.924 kb on - strand at 751.960 kb on - strand at 751.960 kb on - strand at 751.960 kb on - strand at 751.960 kb on - strand at 751.972 kb on - strand at 751.972 kb on - strand at 751.974 kb on - strand at 751.974 kb on - strand at 751.991 kb on - strand at 752.054 kb on - strand at 752.143 kb on + strand at 752.152 kb on + strand at 752.173 kb on + strand at 752.174 kb on - strand at 752.174 kb on - strand at 752.174 kb on - strand at 752.256 kb on - strand, within OH686_03635 at 752.721 kb on - strand, within OH686_03635 at 752.721 kb on - strand, within OH686_03635 at 752.721 kb on - strand, within OH686_03635 at 752.817 kb on + strand, within OH686_03635 at 752.817 kb on + strand, within OH686_03635 at 752.817 kb on + strand, within OH686_03635 at 752.817 kb on + strand, within OH686_03635 at 752.818 kb on - strand, within OH686_03635 at 752.818 kb on - strand, within OH686_03635 at 752.818 kb on - strand, within OH686_03635 at 752.820 kb on + strand, within OH686_03635 at 752.821 kb on - strand, within OH686_03635
Per-strain Table
Position Strand Gene LocusTag Fraction Sorgoleone (C) remove 750,666 + OH686_03625 0.59 -0.3 750,666 + OH686_03625 0.59 +0.7 750,666 + OH686_03625 0.59 +0.4 750,666 + OH686_03625 0.59 -0.6 750,667 - OH686_03625 0.59 -0.1 750,667 - OH686_03625 0.59 +0.1 750,667 - OH686_03625 0.59 +0.1 750,667 - OH686_03625 0.59 -1.1 750,667 - OH686_03625 0.59 +0.4 750,735 + OH686_03625 0.63 -0.6 750,736 - OH686_03625 0.63 -0.3 750,736 - OH686_03625 0.63 +0.4 750,736 - OH686_03625 0.63 -1.5 750,786 + OH686_03625 0.65 +0.1 750,786 + OH686_03625 0.65 -0.8 750,786 + OH686_03625 0.65 +0.4 750,786 + OH686_03625 0.65 -1.3 750,786 + OH686_03625 0.65 -0.9 750,786 + OH686_03625 0.65 -1.1 750,786 + OH686_03625 0.65 +0.7 750,787 - OH686_03625 0.66 -0.8 750,787 - OH686_03625 0.66 -0.4 750,789 + OH686_03625 0.66 -0.3 750,789 + OH686_03625 0.66 -0.6 750,789 + OH686_03625 0.66 -0.8 750,790 - OH686_03625 0.66 -0.3 750,790 - OH686_03625 0.66 +0.5 750,953 + OH686_03625 0.74 +0.1 750,953 + OH686_03625 0.74 +0.4 750,953 + OH686_03625 0.74 -0.8 750,953 + OH686_03625 0.74 -1.5 750,953 + OH686_03625 0.74 -0.3 750,954 - OH686_03625 0.75 -0.4 750,954 - OH686_03625 0.75 -2.0 751,091 - OH686_03625 0.82 -0.2 751,138 + OH686_03625 0.84 -0.6 751,139 - OH686_03625 0.84 -0.1 751,523 + +0.4 751,524 - +0.1 751,911 - -1.9 751,911 - -0.6 751,924 - +1.0 751,924 - -0.1 751,960 - +0.6 751,960 - +0.3 751,960 - +0.2 751,960 - +0.8 751,972 - -1.5 751,972 - -0.1 751,974 - -0.2 751,974 - -0.6 751,991 - +0.7 752,054 - +0.7 752,143 + -0.4 752,152 + -0.1 752,173 + +0.1 752,174 - -1.2 752,174 - +0.2 752,174 - -1.3 752,256 - OH686_03635 0.10 -0.9 752,721 - OH686_03635 0.30 -1.6 752,721 - OH686_03635 0.30 -1.5 752,721 - OH686_03635 0.30 -2.1 752,817 + OH686_03635 0.34 -2.1 752,817 + OH686_03635 0.34 -0.4 752,817 + OH686_03635 0.34 -0.3 752,817 + OH686_03635 0.34 -1.8 752,818 - OH686_03635 0.34 -1.2 752,818 - OH686_03635 0.34 -0.3 752,818 - OH686_03635 0.34 +2.0 752,820 + OH686_03635 0.34 -0.9 752,821 - OH686_03635 0.34 -0.6
Or see this region's nucleotide sequence