Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03595 and ABID97_RS03600 are separated by 71 nucleotides ABID97_RS03600 and ABID97_RS03605 are separated by 27 nucleotides ABID97_RS03605 and ABID97_RS03610 overlap by 4 nucleotides
ABID97_RS03595: ABID97_RS03595 - hypothetical protein, at 739,971 to 740,702
_RS03595
ABID97_RS03600: ABID97_RS03600 - MFS transporter, at 740,774 to 741,862
_RS03600
ABID97_RS03605: ABID97_RS03605 - type IVB secretion system protein IcmH/DotU, at 741,890 to 742,762
_RS03605
ABID97_RS03610: ABID97_RS03610 - pentapeptide repeat-containing protein, at 742,759 to 743,253
_RS03610
Position (kb) 740
741
742 Strain fitness (log2 ratio) -1
0
1 at 739.870 kb on + strand at 739.871 kb on - strand at 739.892 kb on - strand at 739.916 kb on - strand at 739.916 kb on - strand at 739.934 kb on + strand at 739.949 kb on - strand at 739.999 kb on - strand at 740.763 kb on - strand at 740.763 kb on - strand at 741.091 kb on + strand, within ABID97_RS03600 at 741.091 kb on + strand, within ABID97_RS03600 at 741.092 kb on - strand, within ABID97_RS03600 at 741.092 kb on - strand, within ABID97_RS03600 at 741.159 kb on - strand, within ABID97_RS03600 at 741.518 kb on + strand, within ABID97_RS03600 at 741.518 kb on + strand, within ABID97_RS03600 at 741.572 kb on + strand, within ABID97_RS03600 at 741.875 kb on - strand at 741.890 kb on - strand at 742.244 kb on + strand, within ABID97_RS03605 at 742.244 kb on + strand, within ABID97_RS03605 at 742.244 kb on + strand, within ABID97_RS03605 at 742.244 kb on + strand, within ABID97_RS03605 at 742.245 kb on - strand, within ABID97_RS03605 at 742.668 kb on + strand, within ABID97_RS03605 at 742.668 kb on + strand, within ABID97_RS03605 at 742.669 kb on - strand, within ABID97_RS03605 at 742.698 kb on + strand at 742.699 kb on - strand at 742.699 kb on - strand at 742.855 kb on + strand, within ABID97_RS03610 at 742.856 kb on - strand, within ABID97_RS03610
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 739,870 + -0.7 739,871 - +0.0 739,892 - +0.3 739,916 - +0.9 739,916 - -0.2 739,934 + +0.4 739,949 - +0.5 739,999 - -0.3 740,763 - +1.5 740,763 - -0.0 741,091 + ABID97_RS03600 0.29 -1.6 741,091 + ABID97_RS03600 0.29 -1.1 741,092 - ABID97_RS03600 0.29 -0.2 741,092 - ABID97_RS03600 0.29 -1.1 741,159 - ABID97_RS03600 0.35 +0.2 741,518 + ABID97_RS03600 0.68 -0.7 741,518 + ABID97_RS03600 0.68 +0.1 741,572 + ABID97_RS03600 0.73 -0.1 741,875 - -0.5 741,890 - -1.3 742,244 + ABID97_RS03605 0.41 -0.1 742,244 + ABID97_RS03605 0.41 -0.7 742,244 + ABID97_RS03605 0.41 -0.1 742,244 + ABID97_RS03605 0.41 +0.1 742,245 - ABID97_RS03605 0.41 -0.0 742,668 + ABID97_RS03605 0.89 -1.0 742,668 + ABID97_RS03605 0.89 +1.2 742,669 - ABID97_RS03605 0.89 -0.9 742,698 + +0.3 742,699 - -0.2 742,699 - -0.1 742,855 + ABID97_RS03610 0.19 -0.1 742,856 - ABID97_RS03610 0.20 +1.0
Or see this region's nucleotide sequence