Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3451 and Psyr_3452 overlap by 41 nucleotides Psyr_3452 and Psyr_3453 are separated by 84 nucleotides Psyr_3453 and Psyr_3454 are separated by 6 nucleotides
Psyr_3451: Psyr_3451 - Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E, at 4,114,333 to 4,116,039
_3451
Psyr_3452: Psyr_3452 - Sulfate transporter/antisigma-factor antagonist STAS, at 4,115,999 to 4,116,346
_3452
Psyr_3453: Psyr_3453 - flagellar protein FliJ, putative, at 4,116,431 to 4,116,880
_3453
Psyr_3454: Psyr_3454 - ATPase FliI/YscN, at 4,116,887 to 4,118,245
_3454
Position (kb) 4116
4117 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4115.516 kb on + strand, within Psyr_3451 at 4115.600 kb on + strand, within Psyr_3451 at 4115.600 kb on + strand, within Psyr_3451 at 4115.601 kb on - strand, within Psyr_3451 at 4115.705 kb on + strand, within Psyr_3451 at 4115.705 kb on + strand, within Psyr_3451 at 4115.718 kb on + strand, within Psyr_3451 at 4115.718 kb on + strand, within Psyr_3451 at 4115.719 kb on - strand, within Psyr_3451 at 4116.192 kb on + strand, within Psyr_3452 at 4116.193 kb on - strand, within Psyr_3452 at 4116.193 kb on - strand, within Psyr_3452 at 4116.219 kb on + strand, within Psyr_3452 at 4116.219 kb on + strand, within Psyr_3452 at 4116.219 kb on + strand, within Psyr_3452 at 4116.219 kb on + strand, within Psyr_3452 at 4116.219 kb on + strand, within Psyr_3452 at 4116.220 kb on - strand, within Psyr_3452 at 4116.220 kb on - strand, within Psyr_3452 at 4116.220 kb on - strand, within Psyr_3452 at 4116.220 kb on - strand, within Psyr_3452 at 4116.247 kb on - strand, within Psyr_3452 at 4116.296 kb on - strand, within Psyr_3452 at 4116.296 kb on - strand, within Psyr_3452 at 4116.297 kb on + strand, within Psyr_3452 at 4116.297 kb on + strand, within Psyr_3452 at 4116.298 kb on - strand, within Psyr_3452 at 4116.298 kb on - strand, within Psyr_3452 at 4116.298 kb on - strand, within Psyr_3452 at 4116.298 kb on - strand, within Psyr_3452 at 4116.298 kb on - strand, within Psyr_3452 at 4116.387 kb on + strand at 4116.523 kb on - strand, within Psyr_3453 at 4116.523 kb on - strand, within Psyr_3453 at 4116.561 kb on + strand, within Psyr_3453 at 4116.624 kb on + strand, within Psyr_3453 at 4116.624 kb on + strand, within Psyr_3453 at 4116.625 kb on - strand, within Psyr_3453 at 4116.625 kb on - strand, within Psyr_3453 at 4116.669 kb on + strand, within Psyr_3453 at 4117.039 kb on - strand, within Psyr_3454 at 4117.290 kb on + strand, within Psyr_3454 at 4117.303 kb on + strand, within Psyr_3454 at 4117.303 kb on + strand, within Psyr_3454 at 4117.303 kb on + strand, within Psyr_3454 at 4117.303 kb on + strand, within Psyr_3454 at 4117.303 kb on + strand, within Psyr_3454 at 4117.303 kb on + strand, within Psyr_3454 at 4117.304 kb on - strand, within Psyr_3454 at 4117.512 kb on + strand, within Psyr_3454 at 4117.512 kb on + strand, within Psyr_3454 at 4117.512 kb on + strand, within Psyr_3454 at 4117.513 kb on - strand, within Psyr_3454 at 4117.513 kb on - strand, within Psyr_3454 at 4117.513 kb on - strand, within Psyr_3454 at 4117.513 kb on - strand, within Psyr_3454 at 4117.513 kb on - strand, within Psyr_3454 at 4117.513 kb on - strand, within Psyr_3454
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 4,115,516 + Psyr_3451 0.69 +0.0 4,115,600 + Psyr_3451 0.74 +1.0 4,115,600 + Psyr_3451 0.74 +0.3 4,115,601 - Psyr_3451 0.74 +0.3 4,115,705 + Psyr_3451 0.80 +0.5 4,115,705 + Psyr_3451 0.80 -0.1 4,115,718 + Psyr_3451 0.81 -2.0 4,115,718 + Psyr_3451 0.81 +0.9 4,115,719 - Psyr_3451 0.81 -0.8 4,116,192 + Psyr_3452 0.55 -0.8 4,116,193 - Psyr_3452 0.56 -0.7 4,116,193 - Psyr_3452 0.56 +0.8 4,116,219 + Psyr_3452 0.63 +0.4 4,116,219 + Psyr_3452 0.63 +0.8 4,116,219 + Psyr_3452 0.63 +0.3 4,116,219 + Psyr_3452 0.63 -0.6 4,116,219 + Psyr_3452 0.63 +0.5 4,116,220 - Psyr_3452 0.64 +0.1 4,116,220 - Psyr_3452 0.64 +1.2 4,116,220 - Psyr_3452 0.64 -0.5 4,116,220 - Psyr_3452 0.64 +0.6 4,116,247 - Psyr_3452 0.71 +0.6 4,116,296 - Psyr_3452 0.85 -0.9 4,116,296 - Psyr_3452 0.85 +0.2 4,116,297 + Psyr_3452 0.86 -0.1 4,116,297 + Psyr_3452 0.86 +0.2 4,116,298 - Psyr_3452 0.86 -0.2 4,116,298 - Psyr_3452 0.86 -0.2 4,116,298 - Psyr_3452 0.86 +0.8 4,116,298 - Psyr_3452 0.86 -0.6 4,116,298 - Psyr_3452 0.86 -0.5 4,116,387 + +0.4 4,116,523 - Psyr_3453 0.20 +0.5 4,116,523 - Psyr_3453 0.20 +0.8 4,116,561 + Psyr_3453 0.29 -0.9 4,116,624 + Psyr_3453 0.43 +2.0 4,116,624 + Psyr_3453 0.43 +0.7 4,116,625 - Psyr_3453 0.43 +1.1 4,116,625 - Psyr_3453 0.43 +0.7 4,116,669 + Psyr_3453 0.53 +0.2 4,117,039 - Psyr_3454 0.11 +0.7 4,117,290 + Psyr_3454 0.30 +1.1 4,117,303 + Psyr_3454 0.31 +1.3 4,117,303 + Psyr_3454 0.31 +0.7 4,117,303 + Psyr_3454 0.31 -0.1 4,117,303 + Psyr_3454 0.31 -0.8 4,117,303 + Psyr_3454 0.31 -1.6 4,117,303 + Psyr_3454 0.31 -0.4 4,117,304 - Psyr_3454 0.31 -0.2 4,117,512 + Psyr_3454 0.46 -0.7 4,117,512 + Psyr_3454 0.46 +0.1 4,117,512 + Psyr_3454 0.46 -1.6 4,117,513 - Psyr_3454 0.46 +0.4 4,117,513 - Psyr_3454 0.46 -0.3 4,117,513 - Psyr_3454 0.46 -0.3 4,117,513 - Psyr_3454 0.46 -0.6 4,117,513 - Psyr_3454 0.46 -0.1 4,117,513 - Psyr_3454 0.46 -0.2
Or see this region's nucleotide sequence