Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1090

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
1,231,170	+		Psyr_1088	0.30	-1.2
1,231,171	-		Psyr_1088	0.30	-0.4
1,231,171	-		Psyr_1088	0.30	-0.1
1,231,219	+		Psyr_1088	0.36	-0.1
1,231,219	+		Psyr_1088	0.36	-0.8
1,231,219	+		Psyr_1088	0.36	+0.9
1,231,222	+		Psyr_1088	0.37	-0.2
1,231,222	+		Psyr_1088	0.37	+0.4
1,231,222	+		Psyr_1088	0.37	+1.6
1,231,222	+		Psyr_1088	0.37	-0.2
1,231,222	+		Psyr_1088	0.37	+1.1
1,231,222	+		Psyr_1088	0.37	-0.8
1,231,222	+		Psyr_1088	0.37	+1.3
1,231,222	+		Psyr_1088	0.37	-0.4
1,231,223	-		Psyr_1088	0.37	+0.1
1,231,223	-		Psyr_1088	0.37	+0.8
1,231,223	-		Psyr_1088	0.37	-0.3
1,231,223	-		Psyr_1088	0.37	-0.3
1,231,263	+		Psyr_1088	0.42	-0.9
1,231,264	-		Psyr_1088	0.42	-0.0
1,231,267	+		Psyr_1088	0.43	+0.8
1,231,267	+		Psyr_1088	0.43	+0.5
1,231,278	+		Psyr_1088	0.44	-0.5
1,231,299	+		Psyr_1088	0.47	+1.2
1,231,300	-		Psyr_1088	0.47	-0.2
1,231,300	-		Psyr_1088	0.47	-0.1
1,231,321	+		Psyr_1088	0.50	-0.2
1,231,322	-		Psyr_1088	0.50	-0.8
1,231,322	-		Psyr_1088	0.50	+0.8
1,231,324	-		Psyr_1088	0.51	-0.4
1,231,353	+		Psyr_1088	0.55	-1.5
1,231,353	+		Psyr_1088	0.55	-2.4
1,231,353	+		Psyr_1088	0.55	+0.8
1,231,354	-		Psyr_1088	0.55	-1.6
1,231,354	-		Psyr_1088	0.55	-0.4
1,231,354	-		Psyr_1088	0.55	+0.6
1,231,354	-		Psyr_1088	0.55	+0.1
1,231,354	-		Psyr_1088	0.55	-0.8
1,231,354	-		Psyr_1088	0.55	-0.4
1,231,486	+		Psyr_1088	0.73	+0.0
1,231,522	+		Psyr_1088	0.78	+0.2
1,231,522	+		Psyr_1088	0.78	+0.2
1,231,523	-		Psyr_1088	0.78	+0.0
1,231,560	+		Psyr_1088	0.83	-0.2
1,231,565	-		Psyr_1088	0.84	-0.8
1,231,567	+		Psyr_1088	0.84	+0.6
1,231,568	-		Psyr_1088	0.84	-0.3
1,231,570	+		Psyr_1088	0.84	-0.5
1,231,570	+		Psyr_1088	0.84	+0.3
1,231,570	+		Psyr_1088	0.84	-0.1
1,231,571	-		Psyr_1088	0.84	-2.2
1,231,669	-				+0.5
1,231,694	+				+0.2
1,231,694	+				-0.1
1,231,694	+				-0.2
1,231,694	+				-0.9
1,231,694	+				+0.8
1,231,695	-				+1.2
1,231,695	-				+0.8
1,231,695	-				-0.1
1,231,695	-				+0.8
1,231,951	-		Psyr_1089	0.51	-0.8
1,232,156	+				+1.2
1,232,219	+		Psyr_1090	0.11	+0.1
1,232,251	+		Psyr_1090	0.19	-3.3
1,232,252	-		Psyr_1090	0.19	+0.3
1,232,252	-		Psyr_1090	0.19	+0.1
1,232,492	+		Psyr_1090	0.75	+0.8
1,232,579	+				+0.2
1,232,579	+				-0.4
1,232,579	+				+0.5
1,232,579	+				+0.6
1,232,580	-				+0.2
1,232,580	-				+0.2
1,232,580	-				-0.0
1,232,580	-				-0.5
1,232,580	-				-0.3
1,232,580	-				+0.8
1,232,580	-				-0.1
1,232,657	+				+0.6
1,232,660	-				+0.5
1,232,777	+				-1.2
1,232,985	+		Psyr_1091	0.22	+0.8
1,232,986	-		Psyr_1091	0.22	-1.0
1,233,065	+		Psyr_1091	0.27	-1.8
1,233,395	+		Psyr_1091	0.50	-0.6
1,233,395	+		Psyr_1091	0.50	-0.5
1,233,548	+		Psyr_1091	0.60	-1.0
1,233,549	-		Psyr_1091	0.60	-1.2
1,233,549	-		Psyr_1091	0.60	-0.2