Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_758

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
862,686	+				+2.2
862,686	+				-2.1
862,686	+				+1.1
862,686	+				+0.6
862,686	+				+1.0
862,686	+				+0.4
862,686	+				-1.5
862,686	+				+1.1
862,686	+				-0.4
862,686	+				-1.3
862,686	+				+0.7
862,686	+				+1.5
862,686	+				+0.7
862,687	-				-1.8
862,687	-				-2.5
862,687	-				-2.5
862,687	-				-1.0
862,687	-				-2.5
862,687	-				-1.9
862,687	-				-0.9
862,687	-				+0.7
862,687	-				-0.9
862,687	-				-2.4
862,687	-				-2.1
862,687	-				-1.5
862,687	-				-0.2
862,687	-				-2.2
862,690	+				-1.4
862,690	+				-2.6
862,690	+				-0.1
862,690	+				-3.2
862,690	+				+0.9
862,690	+				-2.8
862,690	+				-0.9
862,690	+				-0.1
862,691	-				-1.3
862,691	-				-1.6
862,691	-				+1.7
862,691	-				-0.9
862,691	-				-1.6
862,691	-				+0.6
862,691	-				-2.6
862,691	-				+0.8
862,748	+				-1.1
862,748	+				-3.3
862,751	+				-2.6
862,751	+				-1.6
863,391	+		PfGW456L13_757	0.85	-1.7
863,392	-		PfGW456L13_757	0.85	-0.5
863,392	-		PfGW456L13_757	0.85	-1.3
863,399	-		PfGW456L13_757	0.86	+0.3
863,498	+				-0.3
863,498	+				-0.4
863,498	+				+0.8
863,498	+				-1.0
863,498	+				+0.1
863,499	-				-1.7
863,499	-				-1.7
863,499	-				-1.8
863,499	-				+0.7
863,502	+				-0.1
863,502	+				-0.2
863,502	+				-2.7
863,502	+				-0.2
863,502	+				-1.0
863,502	+				+0.5
863,502	+				-2.0
863,502	+				-0.7
863,502	+				-0.3
863,502	+				+0.7
863,502	+				-1.7
863,502	+				+0.5
863,502	+				+0.8
863,502	+				+0.1
863,503	-				-0.5
863,503	-				+0.8
863,503	-				-0.3
863,503	-				-0.9
863,503	-				+1.1
863,503	-				+0.4
863,503	-				+2.5
863,503	-				+0.8
863,516	+				-0.4
863,517	-				+1.3
863,641	-				+1.5
863,678	+				+1.1
863,678	+				+0.5
863,679	-				+0.3
863,679	-				+0.5
863,679	-				-1.0
863,679	-				-1.8
863,679	-				-2.2
863,748	+				+1.5
863,748	+				-1.0
863,748	+				-2.0
863,748	+				+1.0
863,748	+				+0.4
863,749	-				-0.8
863,749	-				-0.9
863,749	-				-1.8
863,749	-				+2.2
863,749	-				+1.5
863,749	-				+2.1
864,076	+		PfGW456L13_758	0.45	+1.7
864,077	-		PfGW456L13_758	0.45	-0.7
864,149	-		PfGW456L13_758	0.53	-0.1
864,149	-		PfGW456L13_758	0.53	-0.3
864,516	+				+0.3
864,516	+				-1.1
864,516	+				-1.4
864,516	+				+0.5
864,516	+				-2.3
864,516	+				+1.0
864,516	+				+1.5
864,516	+				-0.3
864,516	+				-2.2
864,516	+				-0.5
864,516	+				-0.3
864,516	+				+0.4
864,516	+				+1.1
864,516	+				+0.4
864,517	-				-1.1
864,517	-				-1.0
864,517	-				+1.4
864,517	-				+1.5
864,517	-				+2.3
864,517	-				-2.5
864,517	-				+0.6
864,517	-				-1.7
864,517	-				-1.1
864,560	+				-2.2
864,560	+				+1.5
864,560	+				-1.0
864,560	+				+0.7
864,576	+				+0.4
864,577	-				-2.0
864,577	-				+1.6
864,577	-				-3.6
864,578	+				-0.7
864,578	+				-0.4
864,578	+				+0.8
864,578	+				+0.7
864,579	-				-1.8
864,579	-				+0.3
864,579	-				-1.4
864,579	-				-2.0
864,579	-				-1.7
864,628	+				+1.8
864,629	-				-2.2
864,629	-				-1.2
864,629	-				+1.1
864,629	-				+1.2
864,693	+				+1.2
864,694	-				-1.7
864,758	+				+0.2
864,758	+				+0.1
864,758	+				-2.5
864,759	-				-2.0
864,820	+				-1.2
864,820	+				+1.7
864,821	-				-1.2
864,821	-				-2.2
864,821	-				-1.4
864,821	-				-2.8
864,821	-				+0.5
864,867	+				+0.7
864,867	+				-1.4
864,867	+				+0.6
864,867	+				+1.7
864,867	+				+1.3
864,867	+				-0.1
864,867	+				-0.6
864,867	+				+3.0
864,868	-				+0.8
864,868	-				-1.1
864,868	-				+0.9
864,868	-				-2.0
864,868	-				+2.7
864,868	-				-1.7
864,868	-				+0.3
864,868	-				-0.4
864,868	-				+1.1
864,868	-				+0.6
864,885	+				-1.5
864,885	+				+0.6
864,886	-				+0.2
864,886	-				-1.5
864,886	-				+0.6
864,886	-				-2.5
865,017	+		PfGW456L13_759	0.24	-2.1
865,017	+		PfGW456L13_759	0.24	-2.3
865,017	+		PfGW456L13_759	0.24	+2.0
865,017	+		PfGW456L13_759	0.24	-1.3
865,017	+		PfGW456L13_759	0.24	-1.9
865,018	-		PfGW456L13_759	0.25	-0.3
865,018	-		PfGW456L13_759	0.25	+0.2
865,018	-		PfGW456L13_759	0.25	+0.9
865,018	-		PfGW456L13_759	0.25	-0.5
865,018	-		PfGW456L13_759	0.25	-1.7
865,035	+		PfGW456L13_759	0.26	-0.5
865,036	-		PfGW456L13_759	0.27	-0.1
865,036	-		PfGW456L13_759	0.27	+1.8
865,045	+		PfGW456L13_759	0.28	-0.6
865,160	+		PfGW456L13_759	0.40	-2.8
865,160	+		PfGW456L13_759	0.40	-2.7
865,161	-		PfGW456L13_759	0.40	-2.8
865,182	+		PfGW456L13_759	0.43	-1.5
865,182	+		PfGW456L13_759	0.43	-0.1
865,182	+		PfGW456L13_759	0.43	+0.7
865,182	+		PfGW456L13_759	0.43	+0.4
865,182	+		PfGW456L13_759	0.43	-0.7
865,182	+		PfGW456L13_759	0.43	+0.4
865,182	+		PfGW456L13_759	0.43	-1.4
865,182	+		PfGW456L13_759	0.43	+1.1
865,183	-		PfGW456L13_759	0.43	+0.5
865,183	-		PfGW456L13_759	0.43	+0.6
865,183	-		PfGW456L13_759	0.43	-1.8
865,183	-		PfGW456L13_759	0.43	-1.9
865,183	-		PfGW456L13_759	0.43	+0.5
865,183	-		PfGW456L13_759	0.43	-3.0
865,183	-		PfGW456L13_759	0.43	-0.8
865,183	-		PfGW456L13_759	0.43	-1.0
865,183	-		PfGW456L13_759	0.43	+1.7
865,200	+		PfGW456L13_759	0.45	+0.8
865,201	-		PfGW456L13_759	0.45	-1.7
865,201	-		PfGW456L13_759	0.45	-1.7
865,201	-		PfGW456L13_759	0.45	+0.6
865,300	-		PfGW456L13_759	0.56	+0.6
865,300	-		PfGW456L13_759	0.56	-0.2
865,334	-		PfGW456L13_759	0.60	-0.6
865,479	+		PfGW456L13_759	0.76	-2.0
865,479	+		PfGW456L13_759	0.76	+0.1
865,480	-		PfGW456L13_759	0.76	+1.8
865,480	-		PfGW456L13_759	0.76	+0.3