Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_310 and PfGW456L13_311 are separated by 49 nucleotides PfGW456L13_311 and PfGW456L13_312 are separated by 351 nucleotides PfGW456L13_312 and PfGW456L13_313 overlap by 4 nucleotides
PfGW456L13_310 - Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-), at 361,707 to 364,220
_310
PfGW456L13_311 - Glucans biosynthesis protein G precursor, at 364,270 to 366,054
_311
PfGW456L13_312 - D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1), at 366,406 to 366,843
_312
PfGW456L13_313 - Proline iminopeptidase (EC 3.4.11.5), at 366,840 to 367,811
_313
Position (kb) 364
365
366
367 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 363.296 kb on + strand, within PfGW456L13_310 at 363.303 kb on + strand, within PfGW456L13_310 at 363.304 kb on - strand, within PfGW456L13_310 at 363.396 kb on - strand, within PfGW456L13_310 at 363.492 kb on + strand, within PfGW456L13_310 at 363.493 kb on - strand, within PfGW456L13_310 at 363.594 kb on - strand, within PfGW456L13_310 at 363.594 kb on - strand, within PfGW456L13_310 at 363.703 kb on + strand, within PfGW456L13_310 at 363.703 kb on + strand, within PfGW456L13_310 at 363.704 kb on - strand, within PfGW456L13_310 at 363.704 kb on - strand, within PfGW456L13_310 at 363.781 kb on + strand, within PfGW456L13_310 at 363.837 kb on + strand, within PfGW456L13_310 at 363.838 kb on - strand, within PfGW456L13_310 at 363.850 kb on + strand, within PfGW456L13_310 at 363.965 kb on + strand, within PfGW456L13_310 at 363.965 kb on + strand, within PfGW456L13_310 at 363.966 kb on - strand, within PfGW456L13_310 at 363.966 kb on - strand, within PfGW456L13_310 at 364.022 kb on + strand at 364.022 kb on + strand at 364.261 kb on - strand at 364.261 kb on - strand at 364.271 kb on + strand at 364.271 kb on + strand at 364.272 kb on - strand at 364.272 kb on - strand at 364.272 kb on - strand at 364.292 kb on + strand at 364.292 kb on + strand at 364.293 kb on - strand at 364.383 kb on + strand at 364.384 kb on - strand at 364.524 kb on + strand, within PfGW456L13_311 at 364.524 kb on + strand, within PfGW456L13_311 at 364.524 kb on + strand, within PfGW456L13_311 at 364.525 kb on - strand, within PfGW456L13_311 at 364.525 kb on - strand, within PfGW456L13_311 at 364.525 kb on - strand, within PfGW456L13_311 at 364.647 kb on + strand, within PfGW456L13_311 at 364.647 kb on + strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.649 kb on + strand, within PfGW456L13_311 at 364.649 kb on + strand, within PfGW456L13_311 at 364.650 kb on - strand, within PfGW456L13_311 at 364.760 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.888 kb on - strand, within PfGW456L13_311 at 364.888 kb on - strand, within PfGW456L13_311 at 364.888 kb on - strand, within PfGW456L13_311 at 365.241 kb on - strand, within PfGW456L13_311 at 365.249 kb on - strand, within PfGW456L13_311 at 365.543 kb on + strand, within PfGW456L13_311 at 365.543 kb on + strand, within PfGW456L13_311 at 365.543 kb on + strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.574 kb on - strand, within PfGW456L13_311 at 365.651 kb on + strand, within PfGW456L13_311 at 365.717 kb on + strand, within PfGW456L13_311 at 365.717 kb on + strand, within PfGW456L13_311 at 365.718 kb on - strand, within PfGW456L13_311 at 365.718 kb on - strand, within PfGW456L13_311 at 365.718 kb on - strand, within PfGW456L13_311 at 365.864 kb on + strand, within PfGW456L13_311 at 365.864 kb on + strand, within PfGW456L13_311 at 365.956 kb on + strand at 365.956 kb on + strand at 365.956 kb on + strand at 365.957 kb on - strand at 365.957 kb on - strand at 365.957 kb on - strand at 365.957 kb on - strand at 366.076 kb on - strand at 366.076 kb on - strand at 366.129 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.253 kb on + strand at 366.253 kb on + strand at 366.254 kb on - strand at 366.254 kb on - strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.302 kb on + strand at 366.303 kb on - strand at 366.303 kb on - strand at 366.303 kb on - strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.307 kb on - strand at 366.307 kb on - strand at 366.309 kb on + strand at 366.310 kb on - strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.343 kb on + strand at 366.343 kb on + strand at 366.344 kb on - strand at 366.344 kb on - strand at 366.416 kb on - strand at 366.416 kb on - strand at 366.427 kb on + strand at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.521 kb on + strand, within PfGW456L13_312 at 366.521 kb on + strand, within PfGW456L13_312 at 366.521 kb on + strand, within PfGW456L13_312 at 366.522 kb on - strand, within PfGW456L13_312 at 366.591 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 367.022 kb on - strand, within PfGW456L13_313 at 367.022 kb on - strand, within PfGW456L13_313
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 363,296 + PfGW456L13_310 0.63 +0.8 363,303 + PfGW456L13_310 0.63 +0.4 363,304 - PfGW456L13_310 0.64 +1.4 363,396 - PfGW456L13_310 0.67 +0.3 363,492 + PfGW456L13_310 0.71 +2.6 363,493 - PfGW456L13_310 0.71 -1.3 363,594 - PfGW456L13_310 0.75 -1.7 363,594 - PfGW456L13_310 0.75 -1.4 363,703 + PfGW456L13_310 0.79 -0.7 363,703 + PfGW456L13_310 0.79 -0.5 363,704 - PfGW456L13_310 0.79 -2.0 363,704 - PfGW456L13_310 0.79 +1.9 363,781 + PfGW456L13_310 0.82 -2.3 363,837 + PfGW456L13_310 0.85 -2.2 363,838 - PfGW456L13_310 0.85 -3.4 363,850 + PfGW456L13_310 0.85 -3.1 363,965 + PfGW456L13_310 0.90 -1.4 363,965 + PfGW456L13_310 0.90 +0.3 363,966 - PfGW456L13_310 0.90 -2.5 363,966 - PfGW456L13_310 0.90 -1.4 364,022 + +0.4 364,022 + +1.0 364,261 - +1.3 364,261 - -0.9 364,271 + +0.8 364,271 + -1.7 364,272 - -1.0 364,272 - -2.2 364,272 - +0.6 364,292 + +0.7 364,292 + -2.0 364,293 - +1.7 364,383 + -3.1 364,384 - +1.3 364,524 + PfGW456L13_311 0.14 +0.1 364,524 + PfGW456L13_311 0.14 -1.0 364,524 + PfGW456L13_311 0.14 -0.2 364,525 - PfGW456L13_311 0.14 +1.9 364,525 - PfGW456L13_311 0.14 -0.0 364,525 - PfGW456L13_311 0.14 +1.5 364,647 + PfGW456L13_311 0.21 -0.4 364,647 + PfGW456L13_311 0.21 +1.3 364,648 - PfGW456L13_311 0.21 -2.4 364,648 - PfGW456L13_311 0.21 +1.7 364,648 - PfGW456L13_311 0.21 -2.1 364,648 - PfGW456L13_311 0.21 -2.3 364,648 - PfGW456L13_311 0.21 +0.1 364,649 + PfGW456L13_311 0.21 -0.5 364,649 + PfGW456L13_311 0.21 -0.2 364,650 - PfGW456L13_311 0.21 +0.5 364,760 + PfGW456L13_311 0.27 -1.9 364,887 + PfGW456L13_311 0.35 +1.8 364,887 + PfGW456L13_311 0.35 +0.5 364,887 + PfGW456L13_311 0.35 +0.6 364,887 + PfGW456L13_311 0.35 +1.6 364,887 + PfGW456L13_311 0.35 +1.6 364,888 - PfGW456L13_311 0.35 -0.6 364,888 - PfGW456L13_311 0.35 +0.2 364,888 - PfGW456L13_311 0.35 +0.3 365,241 - PfGW456L13_311 0.54 +0.8 365,249 - PfGW456L13_311 0.55 -0.8 365,543 + PfGW456L13_311 0.71 +2.1 365,543 + PfGW456L13_311 0.71 +1.0 365,543 + PfGW456L13_311 0.71 +1.7 365,544 - PfGW456L13_311 0.71 +0.8 365,544 - PfGW456L13_311 0.71 -0.7 365,544 - PfGW456L13_311 0.71 +0.7 365,544 - PfGW456L13_311 0.71 -1.4 365,574 - PfGW456L13_311 0.73 -1.5 365,651 + PfGW456L13_311 0.77 -0.1 365,717 + PfGW456L13_311 0.81 +1.9 365,717 + PfGW456L13_311 0.81 +0.3 365,718 - PfGW456L13_311 0.81 -0.5 365,718 - PfGW456L13_311 0.81 -0.7 365,718 - PfGW456L13_311 0.81 -0.4 365,864 + PfGW456L13_311 0.89 -0.6 365,864 + PfGW456L13_311 0.89 -0.2 365,956 + +1.2 365,956 + -2.5 365,956 + +0.3 365,957 - -1.5 365,957 - -2.1 365,957 - -0.8 365,957 - -1.1 366,076 - -1.4 366,076 - -0.6 366,129 - +0.7 366,147 - -0.9 366,147 - -0.2 366,147 - -1.9 366,147 - -0.7 366,147 - +1.4 366,147 - +0.5 366,147 - -1.7 366,147 - +1.2 366,253 + +1.7 366,253 + +1.0 366,254 - -1.4 366,254 - -1.3 366,257 + +1.3 366,257 + -1.4 366,257 + -2.2 366,257 + -2.9 366,257 + -1.3 366,258 - -0.4 366,258 - +1.6 366,258 - +2.2 366,258 - -0.4 366,258 - -1.3 366,258 - -1.8 366,258 - -1.3 366,302 + -2.0 366,303 - +0.5 366,303 - -0.3 366,303 - +1.2 366,306 + +0.9 366,306 + -2.2 366,306 + -0.4 366,306 + +2.0 366,306 + -0.5 366,306 + -0.6 366,306 + -0.9 366,306 + -1.6 366,306 + -1.1 366,306 + +0.9 366,307 - -2.9 366,307 - -0.7 366,309 + -1.9 366,310 - +0.3 366,319 + -0.7 366,319 + -1.8 366,319 + -0.7 366,319 + -0.2 366,319 + -1.1 366,343 + +2.4 366,343 + +1.2 366,344 - +1.0 366,344 - +0.6 366,416 - -1.2 366,416 - -0.8 366,427 + -0.4 366,515 - PfGW456L13_312 0.25 -0.6 366,515 - PfGW456L13_312 0.25 +0.5 366,515 - PfGW456L13_312 0.25 +1.4 366,515 - PfGW456L13_312 0.25 +1.3 366,515 - PfGW456L13_312 0.25 -2.4 366,517 + PfGW456L13_312 0.25 -0.9 366,517 + PfGW456L13_312 0.25 -1.0 366,517 + PfGW456L13_312 0.25 -2.2 366,517 + PfGW456L13_312 0.25 -1.3 366,517 + PfGW456L13_312 0.25 +1.3 366,517 + PfGW456L13_312 0.25 +1.4 366,517 + PfGW456L13_312 0.25 -1.4 366,517 + PfGW456L13_312 0.25 -1.7 366,518 - PfGW456L13_312 0.26 -0.5 366,518 - PfGW456L13_312 0.26 -1.0 366,518 - PfGW456L13_312 0.26 +1.7 366,518 - PfGW456L13_312 0.26 +1.1 366,518 - PfGW456L13_312 0.26 +1.3 366,518 - PfGW456L13_312 0.26 +0.6 366,518 - PfGW456L13_312 0.26 -0.7 366,518 - PfGW456L13_312 0.26 -0.2 366,521 + PfGW456L13_312 0.26 +0.9 366,521 + PfGW456L13_312 0.26 +1.2 366,521 + PfGW456L13_312 0.26 +0.7 366,522 - PfGW456L13_312 0.26 +1.3 366,591 + PfGW456L13_312 0.42 -1.1 366,693 + PfGW456L13_312 0.66 +0.6 366,693 + PfGW456L13_312 0.66 -2.0 366,693 + PfGW456L13_312 0.66 +0.7 366,693 + PfGW456L13_312 0.66 -2.7 366,693 + PfGW456L13_312 0.66 -0.7 366,693 + PfGW456L13_312 0.66 -2.8 366,693 + PfGW456L13_312 0.66 -0.8 366,693 + PfGW456L13_312 0.66 +0.4 366,693 + PfGW456L13_312 0.66 +0.4 366,693 + PfGW456L13_312 0.66 -0.7 366,693 + PfGW456L13_312 0.66 +1.9 366,694 - PfGW456L13_312 0.66 -3.8 366,694 - PfGW456L13_312 0.66 -2.1 366,694 - PfGW456L13_312 0.66 -0.1 366,694 - PfGW456L13_312 0.66 -1.9 366,694 - PfGW456L13_312 0.66 +1.8 366,694 - PfGW456L13_312 0.66 +0.7 366,702 + PfGW456L13_312 0.68 +1.7 366,702 + PfGW456L13_312 0.68 -1.6 366,702 + PfGW456L13_312 0.68 -0.7 366,702 + PfGW456L13_312 0.68 -0.9 366,703 - PfGW456L13_312 0.68 -0.8 366,703 - PfGW456L13_312 0.68 +0.9 366,703 - PfGW456L13_312 0.68 +1.0 366,703 - PfGW456L13_312 0.68 -2.3 366,703 - PfGW456L13_312 0.68 -0.6 367,022 - PfGW456L13_313 0.19 -2.8 367,022 - PfGW456L13_313 0.19 +0.3
Or see this region's nucleotide sequence