Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3061

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
3,403,363	-		PfGW456L13_3060	0.69	+2.1
3,403,363	-		PfGW456L13_3060	0.69	-0.5
3,403,518	+		PfGW456L13_3060	0.74	-0.8
3,403,518	+		PfGW456L13_3060	0.74	+0.4
3,403,519	-		PfGW456L13_3060	0.74	+0.6
3,403,519	-		PfGW456L13_3060	0.74	-1.2
3,403,797	+		PfGW456L13_3060	0.83	+0.0
3,403,875	+		PfGW456L13_3060	0.85	+0.4
3,403,875	+		PfGW456L13_3060	0.85	+1.9
3,403,875	+		PfGW456L13_3060	0.85	+1.5
3,403,875	+		PfGW456L13_3060	0.85	+0.5
3,403,875	+		PfGW456L13_3060	0.85	+1.3
3,403,876	-		PfGW456L13_3060	0.85	-0.5
3,403,876	-		PfGW456L13_3060	0.85	-0.9
3,403,876	-		PfGW456L13_3060	0.85	-0.7
3,403,887	+		PfGW456L13_3060	0.85	+0.4
3,403,887	+		PfGW456L13_3060	0.85	+0.2
3,403,887	+		PfGW456L13_3060	0.85	+0.0
3,403,887	+		PfGW456L13_3060	0.85	+0.1
3,403,887	+		PfGW456L13_3060	0.85	+0.0
3,403,887	+		PfGW456L13_3060	0.85	-0.2
3,403,888	-		PfGW456L13_3060	0.85	+0.7
3,403,888	-		PfGW456L13_3060	0.85	+1.3
3,403,966	+		PfGW456L13_3060	0.88	-2.9
3,404,115	+				-1.0
3,404,115	+				+0.5
3,404,115	+				-0.9
3,404,115	+				+0.1
3,404,115	+				+0.4
3,404,115	+				+0.3
3,404,115	+				-0.1
3,404,115	+				-0.7
3,404,115	+				+1.3
3,404,115	+				+1.1
3,404,115	+				-0.8
3,404,115	+				+0.0
3,404,115	+				-2.5
3,404,115	+				+1.1
3,404,115	+				-0.3
3,404,115	+				+0.1
3,404,115	+				+1.3
3,404,115	+				+1.0
3,404,115	+				-2.0
3,404,116	-				-0.8
3,404,116	-				+1.0
3,404,116	-				+0.1
3,404,116	-				+2.0
3,404,116	-				+0.9
3,404,116	-				+2.6
3,404,116	-				+0.2
3,404,116	-				+0.0
3,404,116	-				-1.4
3,404,116	-				+0.3
3,404,116	-				-2.3
3,404,116	-				-0.9
3,404,241	+				+1.5
3,404,353	+				+0.7
3,404,354	-				-1.4
3,404,727	+		PfGW456L13_3061	0.29	+0.6
3,404,727	+		PfGW456L13_3061	0.29	-1.2
3,404,727	+		PfGW456L13_3061	0.29	+0.9
3,404,728	-		PfGW456L13_3061	0.29	-0.4
3,404,760	+		PfGW456L13_3061	0.32	-0.3
3,404,760	+		PfGW456L13_3061	0.32	-0.9
3,404,760	+		PfGW456L13_3061	0.32	-1.9
3,404,760	+		PfGW456L13_3061	0.32	+1.7
3,404,760	+		PfGW456L13_3061	0.32	-2.2
3,404,761	-		PfGW456L13_3061	0.32	-2.3
3,404,761	-		PfGW456L13_3061	0.32	-1.2
3,404,761	-		PfGW456L13_3061	0.32	+0.1
3,404,775	+		PfGW456L13_3061	0.33	+0.7
3,404,775	+		PfGW456L13_3061	0.33	-0.1
3,404,775	+		PfGW456L13_3061	0.33	+0.9
3,404,776	-		PfGW456L13_3061	0.33	+1.0
3,404,901	+		PfGW456L13_3061	0.43	+1.0
3,404,901	+		PfGW456L13_3061	0.43	+1.2
3,404,902	-		PfGW456L13_3061	0.43	-1.9
3,404,902	-		PfGW456L13_3061	0.43	-0.1
3,404,902	-		PfGW456L13_3061	0.43	-0.5
3,404,902	-		PfGW456L13_3061	0.43	-0.6
3,404,949	+		PfGW456L13_3061	0.47	-0.8
3,404,949	+		PfGW456L13_3061	0.47	-1.0
3,404,949	+		PfGW456L13_3061	0.47	-0.8
3,404,949	+		PfGW456L13_3061	0.47	+1.8
3,404,949	+		PfGW456L13_3061	0.47	-2.3
3,404,950	-		PfGW456L13_3061	0.47	+1.0
3,404,950	-		PfGW456L13_3061	0.47	-1.0
3,404,982	+		PfGW456L13_3061	0.49	+2.2
3,404,982	+		PfGW456L13_3061	0.49	+0.1
3,404,982	+		PfGW456L13_3061	0.49	+0.5
3,404,983	-		PfGW456L13_3061	0.49	-2.2
3,404,983	-		PfGW456L13_3061	0.49	+0.8
3,404,988	+		PfGW456L13_3061	0.50	+1.4
3,404,988	+		PfGW456L13_3061	0.50	-0.2
3,404,988	+		PfGW456L13_3061	0.50	-0.3
3,404,988	+		PfGW456L13_3061	0.50	+2.6
3,404,988	+		PfGW456L13_3061	0.50	+0.4
3,404,988	+		PfGW456L13_3061	0.50	-0.9
3,404,988	+		PfGW456L13_3061	0.50	-1.3
3,404,988	+		PfGW456L13_3061	0.50	+1.4
3,404,989	-		PfGW456L13_3061	0.50	-1.6
3,404,989	-		PfGW456L13_3061	0.50	+0.9
3,404,989	-		PfGW456L13_3061	0.50	+1.0
3,405,103	+		PfGW456L13_3061	0.59	-1.7
3,405,103	+		PfGW456L13_3061	0.59	-2.7
3,405,567	-				+0.1
3,405,567	-				-2.1
3,405,668	+				-1.0
3,405,669	-				+2.0
3,405,669	-				-1.5
3,405,669	-				+0.6
3,405,695	+				-2.1
3,405,695	+				+0.0
3,405,695	+				+0.7
3,405,695	+				+0.9
3,405,695	+				-0.3
3,405,695	+				-1.3
3,405,695	+				-2.1
3,405,695	+				+0.8
3,405,695	+				-0.3
3,405,695	+				-0.1
3,405,695	+				+1.1
3,405,696	-				-1.5
3,405,696	-				-0.2
3,405,699	+				+1.8
3,405,699	+				-1.2
3,405,699	+				-1.5
3,405,700	-				-1.2
3,405,700	-				+0.7
3,405,700	-				+2.5
3,405,700	-				-0.6
3,405,700	-				-1.7
3,405,700	-				-1.7
3,405,715	-				-1.6
3,405,715	-				-0.7
3,405,716	+				-0.9
3,405,716	+				-1.2
3,405,716	+				-1.9
3,405,736	+				-0.6
3,405,868	+				+0.4
3,405,868	+				+1.1
3,405,868	+				+1.4
3,405,869	-				-2.4
3,406,056	+		PfGW456L13_3062	0.19	+1.7
3,406,099	+		PfGW456L13_3062	0.24	+0.3
3,406,100	-		PfGW456L13_3062	0.24	-0.5
3,406,227	+		PfGW456L13_3062	0.38	+0.7
3,406,227	+		PfGW456L13_3062	0.38	-0.9
3,406,228	-		PfGW456L13_3062	0.38	-0.6
3,406,295	+		PfGW456L13_3062	0.45	+1.8
3,406,295	+		PfGW456L13_3062	0.45	-0.3
3,406,295	+		PfGW456L13_3062	0.45	-0.2
3,406,295	+		PfGW456L13_3062	0.45	-1.7
3,406,296	-		PfGW456L13_3062	0.45	-2.0
3,406,296	-		PfGW456L13_3062	0.45	-0.1
3,406,296	-		PfGW456L13_3062	0.45	-2.5
3,406,333	-		PfGW456L13_3062	0.49	+0.3
3,406,333	-		PfGW456L13_3062	0.49	-0.1
3,406,350	-		PfGW456L13_3062	0.51	-1.1
3,406,350	-		PfGW456L13_3062	0.51	+0.7
3,406,350	-		PfGW456L13_3062	0.51	+0.6
3,406,386	+		PfGW456L13_3062	0.55	-0.9
3,406,386	+		PfGW456L13_3062	0.55	+0.2
3,406,386	+		PfGW456L13_3062	0.55	-2.2
3,406,386	+		PfGW456L13_3062	0.55	+2.8
3,406,386	+		PfGW456L13_3062	0.55	+0.3
3,406,386	+		PfGW456L13_3062	0.55	-0.1
3,406,386	+		PfGW456L13_3062	0.55	+0.2
3,406,387	-		PfGW456L13_3062	0.55	+0.6
3,406,387	-		PfGW456L13_3062	0.55	-1.2
3,406,387	-		PfGW456L13_3062	0.55	-0.1
3,406,387	-		PfGW456L13_3062	0.55	-0.2
3,406,387	-		PfGW456L13_3062	0.55	+1.0
3,406,387	-		PfGW456L13_3062	0.55	+2.3
3,406,400	+		PfGW456L13_3062	0.57	+1.0
3,406,400	+		PfGW456L13_3062	0.57	-2.1
3,406,401	-		PfGW456L13_3062	0.57	-0.3
3,406,401	-		PfGW456L13_3062	0.57	-0.5
3,406,401	-		PfGW456L13_3062	0.57	-0.3
3,406,401	-		PfGW456L13_3062	0.57	-0.2
3,406,401	-		PfGW456L13_3062	0.57	+0.2
3,406,504	+		PfGW456L13_3062	0.68	+0.0
3,406,504	+		PfGW456L13_3062	0.68	-0.9
3,406,504	+		PfGW456L13_3062	0.68	-0.2