Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2989

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
3,332,790	+		PfGW456L13_2988	0.17	-0.6
3,332,825	+		PfGW456L13_2988	0.20	+0.6
3,332,987	+		PfGW456L13_2988	0.35	-1.3
3,332,987	+		PfGW456L13_2988	0.35	+1.2
3,332,987	+		PfGW456L13_2988	0.35	-0.6
3,332,988	-		PfGW456L13_2988	0.35	+0.3
3,332,988	-		PfGW456L13_2988	0.35	-1.2
3,332,989	+		PfGW456L13_2988	0.35	+1.8
3,332,989	+		PfGW456L13_2988	0.35	-0.4
3,332,989	+		PfGW456L13_2988	0.35	-1.0
3,332,990	-		PfGW456L13_2988	0.35	+1.0
3,332,990	-		PfGW456L13_2988	0.35	+2.0
3,333,089	+		PfGW456L13_2988	0.44	+4.0
3,333,164	+		PfGW456L13_2988	0.51	+1.4
3,333,165	-		PfGW456L13_2988	0.51	-1.7
3,333,165	-		PfGW456L13_2988	0.51	-0.5
3,333,182	+		PfGW456L13_2988	0.53	+0.3
3,333,183	-		PfGW456L13_2988	0.53	+0.1
3,333,234	+		PfGW456L13_2988	0.58	-3.3
3,333,235	-		PfGW456L13_2988	0.58	+0.2
3,333,235	-		PfGW456L13_2988	0.58	-2.0
3,333,235	-		PfGW456L13_2988	0.58	-0.5
3,333,251	+		PfGW456L13_2988	0.59	-1.3
3,333,252	-		PfGW456L13_2988	0.59	+0.3
3,333,252	-		PfGW456L13_2988	0.59	+0.6
3,333,314	+		PfGW456L13_2988	0.65	+0.4
3,333,314	+		PfGW456L13_2988	0.65	+0.8
3,333,315	-		PfGW456L13_2988	0.65	+0.4
3,333,315	-		PfGW456L13_2988	0.65	+0.8
3,333,361	+		PfGW456L13_2988	0.69	+1.0
3,333,361	+		PfGW456L13_2988	0.69	-2.0
3,333,362	-		PfGW456L13_2988	0.69	-0.2
3,333,380	+		PfGW456L13_2988	0.71	-1.1
3,333,590	+				-1.4
3,333,590	+				-1.0
3,333,590	+				+0.0
3,333,590	+				+1.2
3,333,591	-				-1.8
3,333,695	+				+1.2
3,333,695	+				+2.0
3,333,695	+				-0.9
3,333,695	+				-1.7
3,333,695	+				-1.1
3,333,696	-				-3.0
3,333,696	-				+1.1
3,333,696	-				-1.4
3,333,699	+				+1.3
3,333,699	+				-1.8
3,333,699	+				+1.3
3,333,700	-				+0.3
3,333,700	-				-1.4
3,333,700	-				-0.9
3,333,700	-				-1.6
3,333,700	-				-1.0
3,333,701	+				+0.7
3,333,701	+				-0.3
3,333,701	+				+1.5
3,333,701	+				-0.2
3,333,701	+				+1.1
3,333,701	+				-1.2
3,333,701	+				-1.1
3,333,701	+				-1.1
3,333,702	-				+0.8
3,333,702	-				+1.3
3,333,702	-				-1.4
3,333,751	+				-1.8
3,333,787	+				-1.6
3,333,787	+				+0.2
3,333,787	+				+2.1
3,333,787	+				-0.9
3,333,788	-				+1.3
3,333,788	-				-0.2
3,333,788	-				+0.9
3,333,788	-				-1.4
3,333,788	-				-0.3
3,333,792	-				+0.0
3,333,792	-				-1.0
3,333,792	-				-1.1
3,333,792	-				+0.7
3,333,824	+		PfGW456L13_2989	0.11	+0.1
3,334,007	+		PfGW456L13_2989	0.30	+0.4
3,334,078	+		PfGW456L13_2989	0.37	-2.4
3,334,078	+				+0.4
3,334,079	-		PfGW456L13_2989	0.38	-0.2
3,334,129	+		PfGW456L13_2989	0.43	+1.6
3,334,129	+		PfGW456L13_2989	0.43	-1.8
3,334,129	+		PfGW456L13_2989	0.43	+0.4
3,334,130	-		PfGW456L13_2989	0.43	+1.0
3,334,130	-		PfGW456L13_2989	0.43	+1.7
3,334,130	-		PfGW456L13_2989	0.43	-1.8
3,334,133	+		PfGW456L13_2989	0.43	+1.2
3,334,133	+		PfGW456L13_2989	0.43	+1.2
3,334,134	-		PfGW456L13_2989	0.43	-0.4
3,334,134	-		PfGW456L13_2989	0.43	-1.1
3,334,134	-		PfGW456L13_2989	0.43	-0.5
3,334,427	+		PfGW456L13_2989	0.74	-0.7
3,334,428	-		PfGW456L13_2989	0.74	-1.3
3,334,428	-		PfGW456L13_2989	0.74	+1.0
3,334,489	-		PfGW456L13_2989	0.80	-3.1
3,334,489	-		PfGW456L13_2989	0.80	+1.1
3,334,489	-		PfGW456L13_2989	0.80	-1.7
3,334,663	+				-1.0
3,334,663	+				-1.0
3,334,663	+				+2.4
3,334,663	+				+2.4
3,334,663	+				-0.8
3,334,663	+				-1.0
3,334,664	-				-0.1
3,334,672	+				-0.6
3,334,676	+				+0.5
3,334,676	+				+0.4
3,334,676	+				-1.3
3,334,676	+				+1.7
3,334,676	+				-1.1
3,334,677	-				-1.0
3,334,677	-				-0.1
3,334,677	-				+1.3
3,334,677	-				+1.0
3,334,677	-				-0.2
3,334,679	+				-1.1
3,334,679	+				-1.3
3,334,680	-				-1.5
3,334,680	-				-0.9
3,334,680	-				+1.5
3,334,714	+				+0.0
3,334,714	+				+1.1
3,334,714	+				-1.2
3,334,731	+				+0.4
3,334,731	+				-1.6
3,334,731	+				-1.8
3,334,731	+				-0.7
3,334,732	-				+0.9
3,334,770	+				+2.0
3,334,771	-				+2.0
3,334,820	-				-0.8
3,334,820	-				+1.7
3,334,832	+				-0.1
3,334,832	+				-0.9
3,334,833	-				+1.9
3,334,881	+				-0.0
3,334,882	-				-2.4
3,334,882	-				-1.7
3,335,106	+		PfGW456L13_2990	0.51	+2.9
3,335,158	+		PfGW456L13_2990	0.61	-1.8
3,335,158	+		PfGW456L13_2990	0.61	-1.5
3,335,159	-		PfGW456L13_2990	0.61	-1.6
3,335,159	-		PfGW456L13_2990	0.61	-1.9
3,335,159	-		PfGW456L13_2990	0.61	-0.6
3,335,159	-		PfGW456L13_2990	0.61	-2.3
3,335,207	+		PfGW456L13_2990	0.70	-2.3
3,335,207	+		PfGW456L13_2990	0.70	-0.6
3,335,208	-		PfGW456L13_2990	0.70	+1.8
3,335,208	-		PfGW456L13_2990	0.70	-1.1
3,335,208	-		PfGW456L13_2990	0.70	-2.0
3,335,208	-		PfGW456L13_2990	0.70	+1.3
3,335,208	-		PfGW456L13_2990	0.70	-0.2
3,335,258	+		PfGW456L13_2990	0.79	+0.4
3,335,258	+		PfGW456L13_2990	0.79	+1.4
3,335,258	+		PfGW456L13_2990	0.79	-2.1
3,335,258	+		PfGW456L13_2990	0.79	+3.6
3,335,259	-		PfGW456L13_2990	0.79	+0.1
3,335,259	-		PfGW456L13_2990	0.79	+0.4
3,335,259	-		PfGW456L13_2990	0.79	-0.4
3,335,259	-		PfGW456L13_2990	0.79	-0.2
3,335,325	+				-0.1
3,335,325	+				+1.4
3,335,325	+				-2.1
3,335,325	+				+0.1
3,335,325	+				+0.1
3,335,325	+				-1.7
3,335,325	+				+1.3
3,335,325	+				-1.2
3,335,326	-				+0.1
3,335,326	-				-1.4
3,335,326	-				-0.2
3,335,326	-				+1.4
3,335,326	-				+1.1
3,335,326	-				-2.8
3,335,327	+				-0.8
3,335,327	+				+0.7
3,335,327	+				-1.4
3,335,327	+				-1.9
3,335,328	-				+2.0
3,335,328	-				-1.8
3,335,328	-				-1.3
3,335,328	-				+0.8
3,335,328	-				+0.1
3,335,328	-				+1.8
3,335,328	-				-0.3
3,335,328	-				-2.3
3,335,328	-				-0.4
3,335,347	+				-0.2
3,335,347	+				-0.2
3,335,347	+				+1.0
3,335,347	+				-1.0
3,335,347	+				-1.2
3,335,347	+				-1.6
3,335,347	+				-0.8
3,335,347	+				+0.2
3,335,347	+				+0.4
3,335,347	+				+0.1
3,335,348	-				+1.1
3,335,348	-				-1.4
3,335,348	-				+1.4
3,335,348	-				-0.2
3,335,348	-				-1.4
3,335,348	-				+0.2
3,335,348	-				+0.4
3,335,348	-				+1.0
3,335,348	-				-1.3
3,335,351	+				+2.0
3,335,351	+				+0.2
3,335,351	+				-2.2
3,335,351	+				-0.7
3,335,351	+				+1.6
3,335,352	-				+2.0
3,335,352	-				+0.1
3,335,352	-				-2.5
3,335,352	-				+1.0
3,335,352	-				+0.4
3,335,352	-				-0.8
3,335,352	-				-1.4
3,335,352	-				-1.4
3,335,352	-				+1.3
3,335,352	-				-0.3
3,335,352	-				-0.5
3,335,354	+				-0.9
3,335,354	+				+0.8
3,335,355	-				-0.4
3,335,355	-				+0.8
3,335,355	-				-1.7
3,335,383	+				-0.8
3,335,383	+				-1.2
3,335,383	+				-0.1
3,335,384	-				+0.8
3,335,384	-				+0.9
3,335,384	-				+1.0
3,335,384	-				+1.0
3,335,384	-				-3.1
3,335,409	+				+0.4
3,335,410	-				-1.3
3,335,413	+				+0.8
3,335,413	+				+0.8
3,335,458	-				-1.0
3,335,458	-				+1.2
3,335,476	+				+0.7
3,335,567	+		PfGW456L13_2991	0.43	-0.3
3,335,567	+		PfGW456L13_2991	0.43	-1.5
3,335,567	+		PfGW456L13_2991	0.43	+1.6
3,335,567	+		PfGW456L13_2991	0.43	+2.0
3,335,567	+		PfGW456L13_2991	0.43	-1.6
3,335,567	+		PfGW456L13_2991	0.43	+0.0
3,335,567	+		PfGW456L13_2991	0.43	-1.9
3,335,567	+		PfGW456L13_2991	0.43	-0.3
3,335,567	+		PfGW456L13_2991	0.43	+2.0
3,335,567	+		PfGW456L13_2991	0.43	-0.8
3,335,567	+		PfGW456L13_2991	0.43	-2.6
3,335,568	-		PfGW456L13_2991	0.43	-2.5
3,335,568	-		PfGW456L13_2991	0.43	+1.4
3,335,568	-		PfGW456L13_2991	0.43	+1.5
3,335,568	-		PfGW456L13_2991	0.43	-0.3
3,335,568	-		PfGW456L13_2991	0.43	-0.3
3,335,568	-		PfGW456L13_2991	0.43	-0.6
3,335,568	-		PfGW456L13_2991	0.43	-0.5
3,335,568	-		PfGW456L13_2991	0.43	-0.6
3,335,568	-		PfGW456L13_2991	0.43	+1.0
3,335,635	+		PfGW456L13_2991	0.68	-1.4
3,335,635	+		PfGW456L13_2991	0.68	-1.8
3,335,635	+		PfGW456L13_2991	0.68	-0.3
3,335,636	-		PfGW456L13_2991	0.68	-1.6
3,335,636	-		PfGW456L13_2991	0.68	-1.1