Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1348

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,491,913	+		PfGW456L13_1346	0.62	-3.2
1,491,986	+		PfGW456L13_1346	0.88	+0.1
1,491,987	-		PfGW456L13_1346	0.88	-2.7
1,492,018	+				-2.2
1,492,018	+				+1.5
1,492,018	+				+1.3
1,492,018	+				+1.0
1,492,018	+				+0.7
1,492,018	+				-0.2
1,492,018	+				+1.3
1,492,018	+				-0.7
1,492,018	+				-0.9
1,492,018	+				-2.0
1,492,018	+				-2.6
1,492,019	-				-0.7
1,492,019	-				-1.0
1,492,019	-				+1.9
1,492,019	-				+1.0
1,492,019	-				-0.9
1,492,019	-				-0.7
1,492,019	-				-0.7
1,492,019	-				+0.5
1,492,022	+				-1.4
1,492,022	+				+0.2
1,492,022	+				+0.8
1,492,022	+				+1.0
1,492,022	+				+0.8
1,492,023	-				-0.2
1,492,023	-				-1.4
1,492,024	+				+0.2
1,492,102	+				-0.4
1,492,103	-				-1.7
1,492,118	+				+2.4
1,492,118	+				+1.2
1,492,119	-				-1.7
1,492,122	+				-1.2
1,492,123	-				+1.7
1,492,123	-				-0.2
1,492,192	+				+1.2
1,492,193	-				-0.7
1,492,193	-				+0.8
1,492,193	-				+0.5
1,492,224	+				+1.4
1,492,224	+				+2.4
1,492,225	-				+2.0
1,492,225	-				-0.1
1,492,225	-				+0.8
1,492,303	+		PfGW456L13_1347	0.17	-1.3
1,492,303	+		PfGW456L13_1347	0.17	-0.2
1,492,303	+		PfGW456L13_1347	0.17	+0.7
1,492,303	+		PfGW456L13_1347	0.17	-1.0
1,492,303	+		PfGW456L13_1347	0.17	-0.1
1,492,303	+		PfGW456L13_1347	0.17	-0.2
1,492,304	-		PfGW456L13_1347	0.18	+0.5
1,492,304	-		PfGW456L13_1347	0.18	+1.2
1,492,304	-		PfGW456L13_1347	0.18	-2.2
1,492,327	-		PfGW456L13_1347	0.21	+1.1
1,492,327	-		PfGW456L13_1347	0.21	+0.9
1,492,433	-		PfGW456L13_1347	0.38	-0.4
1,492,433	-		PfGW456L13_1347	0.38	+1.0
1,492,459	+		PfGW456L13_1347	0.42	+0.4
1,492,459	+		PfGW456L13_1347	0.42	-2.4
1,492,459	+		PfGW456L13_1347	0.42	+1.4
1,492,460	-		PfGW456L13_1347	0.42	+1.2
1,492,460	-		PfGW456L13_1347	0.42	+0.9
1,492,460	-		PfGW456L13_1347	0.42	-0.6
1,492,460	-		PfGW456L13_1347	0.42	+0.2
1,492,624	+		PfGW456L13_1347	0.67	+0.3
1,492,739	+		PfGW456L13_1347	0.85	+0.5
1,492,809	+				+1.5
1,492,809	+				+1.1
1,492,809	+				+1.1
1,492,809	+				+1.0
1,492,809	+				+1.0
1,492,810	-				-0.5
1,492,810	-				+0.3
1,492,810	-				+1.4
1,492,810	-				+0.4
1,492,810	-				-2.6
1,492,810	-				+1.7
1,492,810	-				-1.0
1,492,810	-				+1.4
1,492,810	-				+0.9
1,492,810	-				-1.3
1,492,828	+				-2.1
1,492,828	+				+0.2
1,492,828	+				+0.2
1,492,828	+				-0.8
1,492,828	+				+0.8
1,492,828	+				-2.0
1,492,828	+				-1.1
1,492,828	+				-0.7
1,492,829	-				+0.1
1,492,829	-				-1.2
1,492,832	+				-2.4
1,492,832	+				+1.4
1,492,832	+				+0.8
1,492,832	+				+0.8
1,492,832	+				+0.8
1,492,832	+				+0.6
1,492,832	+				-1.3
1,492,832	+				+1.1
1,492,832	+				+0.7
1,492,832	+				+1.8
1,492,832	+				-1.4
1,492,832	+				-0.4
1,492,832	+				+0.4
1,492,832	+				+1.1
1,492,832	+				+0.0
1,492,832	+				+1.3
1,492,833	-				+1.3
1,492,833	-				+1.2
1,492,833	-				-2.6
1,492,833	-				+0.8
1,492,833	-				+1.9
1,492,833	-				+2.4
1,492,833	-				+0.9
1,492,833	-				-1.2
1,492,833	-				-0.7
1,492,833	-				-0.5
1,492,849	+				-1.5
1,492,849	+				-2.0
1,492,850	-				-1.3
1,492,850	-				+0.3
1,492,850	-				+1.2
1,492,850	-				+1.1
1,492,852	+				-0.7
1,492,852	+				+1.5
1,492,852	+				-0.4
1,492,853	-				+0.2
1,492,853	-				+2.0
1,492,853	-				+0.3
1,492,853	-				+2.1
1,492,853	-				-2.0
1,492,861	+				+1.7
1,492,861	+				+0.3
1,492,861	+				-0.2
1,492,861	+				-0.4
1,492,861	+				-0.9
1,492,861	+				+0.3
1,492,862	-				+0.6
1,492,862	-				+0.3
1,492,862	-				+0.1
1,492,862	-				+1.9
1,493,098	+		PfGW456L13_1348	0.14	+1.3
1,493,099	-		PfGW456L13_1348	0.14	+0.5
1,493,206	+		PfGW456L13_1348	0.20	+1.4
1,493,350	+		PfGW456L13_1348	0.29	-0.3
1,493,350	+		PfGW456L13_1348	0.29	-1.0
1,493,350	+		PfGW456L13_1348	0.29	+1.1
1,493,351	-		PfGW456L13_1348	0.29	-2.1
1,493,351	-		PfGW456L13_1348	0.29	+1.4
1,493,351	-		PfGW456L13_1348	0.29	-1.6
1,493,351	-		PfGW456L13_1348	0.29	+0.1
1,493,516	-		PfGW456L13_1348	0.38	-0.7
1,493,516	-		PfGW456L13_1348	0.38	-1.9
1,493,516	-		PfGW456L13_1348	0.38	-1.7
1,493,572	+		PfGW456L13_1348	0.41	+1.2
1,493,572	+		PfGW456L13_1348	0.41	-1.2
1,493,573	-		PfGW456L13_1348	0.41	-2.3
1,493,573	-		PfGW456L13_1348	0.41	+0.8
1,493,670	+		PfGW456L13_1348	0.47	-1.0
1,493,670	+		PfGW456L13_1348	0.47	+1.1
1,493,670	+		PfGW456L13_1348	0.47	-0.6
1,493,671	-		PfGW456L13_1348	0.47	-0.9
1,493,692	-		PfGW456L13_1348	0.48	-0.2
1,493,720	+		PfGW456L13_1348	0.50	+0.6
1,493,724	+		PfGW456L13_1348	0.50	+1.4
1,493,724	+		PfGW456L13_1348	0.50	+0.4
1,493,724	+		PfGW456L13_1348	0.50	-2.6
1,493,724	+		PfGW456L13_1348	0.50	-0.0
1,493,725	-		PfGW456L13_1348	0.50	-0.5
1,493,725	-		PfGW456L13_1348	0.50	+0.2
1,493,725	-		PfGW456L13_1348	0.50	-2.4
1,493,725	-		PfGW456L13_1348	0.50	-1.0
1,493,725	-		PfGW456L13_1348	0.50	-2.2
1,493,764	+		PfGW456L13_1348	0.53	-2.3
1,493,764	+		PfGW456L13_1348	0.53	+0.1
1,493,764	+		PfGW456L13_1348	0.53	+2.0
1,493,765	-		PfGW456L13_1348	0.53	+0.2
1,493,765	-		PfGW456L13_1348	0.53	-0.0
1,493,791	+		PfGW456L13_1348	0.54	+1.5
1,493,792	-		PfGW456L13_1348	0.54	-2.2
1,493,792	-		PfGW456L13_1348	0.54	-1.2
1,493,857	-		PfGW456L13_1348	0.58	+2.4
1,493,860	+		PfGW456L13_1348	0.58	+2.2
1,493,860	+		PfGW456L13_1348	0.58	+1.4
1,493,860	+				+2.4
1,493,860	+		PfGW456L13_1348	0.58	-2.1
1,493,860	+		PfGW456L13_1348	0.58	+0.3
1,493,861	-		PfGW456L13_1348	0.58	-0.4
1,493,861	-		PfGW456L13_1348	0.58	-2.9
1,493,861	-		PfGW456L13_1348	0.58	+1.2
1,493,861	-		PfGW456L13_1348	0.58	+0.5
1,493,861	-		PfGW456L13_1348	0.58	+0.6
1,493,861	-		PfGW456L13_1348	0.58	-0.2
1,493,861	-		PfGW456L13_1348	0.58	-0.0
1,493,998	+		PfGW456L13_1348	0.66	+0.9
1,493,998	+		PfGW456L13_1348	0.66	+0.6
1,493,998	+		PfGW456L13_1348	0.66	-1.9
1,493,998	+		PfGW456L13_1348	0.66	+2.6
1,493,998	+		PfGW456L13_1348	0.66	+0.5
1,493,998	+		PfGW456L13_1348	0.66	+1.0
1,493,998	+		PfGW456L13_1348	0.66	+1.1
1,493,998	+		PfGW456L13_1348	0.66	+0.6
1,493,998	+		PfGW456L13_1348	0.66	-3.0
1,493,998	+		PfGW456L13_1348	0.66	+0.3
1,493,998	+		PfGW456L13_1348	0.66	-0.8
1,493,998	+		PfGW456L13_1348	0.66	-1.9
1,493,998	+		PfGW456L13_1348	0.66	+0.3
1,493,998	+		PfGW456L13_1348	0.66	+0.1
1,493,998	+		PfGW456L13_1348	0.66	-0.1
1,493,998	+		PfGW456L13_1348	0.66	-2.2
1,493,998	+		PfGW456L13_1348	0.66	-1.8
1,493,998	+		PfGW456L13_1348	0.66	-0.5
1,493,998	+		PfGW456L13_1348	0.66	+2.2
1,493,998	+		PfGW456L13_1348	0.66	+1.2
1,493,998	+		PfGW456L13_1348	0.66	+2.4
1,493,998	+		PfGW456L13_1348	0.66	-2.5
1,493,999	-		PfGW456L13_1348	0.66	+0.4
1,493,999	-		PfGW456L13_1348	0.66	-0.7
1,493,999	-		PfGW456L13_1348	0.66	+0.4
1,493,999	-		PfGW456L13_1348	0.66	-0.2
1,493,999	-				+1.4
1,493,999	-		PfGW456L13_1348	0.66	+1.7
1,493,999	-		PfGW456L13_1348	0.66	+0.7
1,493,999	-		PfGW456L13_1348	0.66	-1.6
1,493,999	-		PfGW456L13_1348	0.66	+1.3
1,493,999	-		PfGW456L13_1348	0.66	-1.0
1,493,999	-		PfGW456L13_1348	0.66	-0.4
1,493,999	-		PfGW456L13_1348	0.66	-0.2
1,493,999	-		PfGW456L13_1348	0.66	+0.5
1,493,999	-		PfGW456L13_1348	0.66	-0.9
1,493,999	-		PfGW456L13_1348	0.66	-0.5
1,493,999	-		PfGW456L13_1348	0.66	-1.2
1,493,999	-		PfGW456L13_1348	0.66	-2.1
1,494,136	+		PfGW456L13_1348	0.74	+0.1
1,494,136	+		PfGW456L13_1348	0.74	-0.5
1,494,137	-		PfGW456L13_1348	0.74	+1.8
1,494,137	-		PfGW456L13_1348	0.74	+0.5
1,494,137	-		PfGW456L13_1348	0.74	+0.2
1,494,137	-		PfGW456L13_1348	0.74	-2.2
1,494,178	+		PfGW456L13_1348	0.77	+0.3
1,494,178	+		PfGW456L13_1348	0.77	+0.1
1,494,206	-		PfGW456L13_1348	0.78	+1.2
1,494,271	+		PfGW456L13_1348	0.82	+0.9
1,494,271	+		PfGW456L13_1348	0.82	-1.8
1,494,271	+		PfGW456L13_1348	0.82	-0.9
1,494,272	-		PfGW456L13_1348	0.82	-2.1
1,494,338	-		PfGW456L13_1348	0.86	-2.4
1,494,406	+		PfGW456L13_1348	0.90	-1.3
1,494,424	+				+1.5
1,494,596	+				+1.4
1,494,608	+				+0.4
1,494,608	+				+1.1
1,494,608	+				-1.7
1,494,608	+				+1.4
1,494,608	+				+0.3
1,494,609	-				+0.1
1,494,619	+				-0.6
1,494,619	+				+1.5
1,494,619	+				-0.9
1,494,619	+				+1.9
1,494,619	+				-2.2
1,494,619	+				+0.7
1,494,619	+				+1.1
1,494,619	+				+1.3
1,494,619	+				+0.2
1,494,619	+				+1.4
1,494,619	+				+0.1
1,494,619	+				+0.4
1,494,619	+				-2.4
1,494,619	+				+1.3
1,494,619	+				-1.5
1,494,619	+				-2.1
1,494,619	+				+0.7
1,494,619	+				-2.3
1,494,620	-				-0.5
1,494,620	-				-0.7
1,494,620	-				+0.3
1,494,620	-				+0.3
1,494,620	-				-2.3
1,494,620	-				-0.7
1,494,620	-				-1.5
1,494,620	-				-1.2
1,494,620	-				+0.0
1,494,620	-				+1.1
1,494,620	-				-0.4
1,494,620	-				+0.2
1,494,620	-				-2.7
1,494,620	-				+0.2
1,494,620	-				+0.5
1,494,620	-				-1.2
1,494,620	-				+1.9
1,494,620	-				+0.4
1,494,620	-				-3.3
1,494,620	-				+0.8
1,494,620	-				-1.7
1,494,629	+				+0.9
1,494,629	+				+0.7
1,494,629	+				-1.7
1,494,629	+				-0.2
1,494,629	+				+0.8
1,494,630	-				-0.0
1,494,632	+				+1.0
1,494,632	+				-0.2
1,494,632	+				-2.4
1,494,632	+				-0.8
1,494,632	+				-2.3
1,494,632	+				-1.4
1,494,633	-				+0.5
1,494,633	-				-3.5
1,494,633	-				+0.5
1,494,633	-				-2.8
1,494,633	-				-1.7
1,494,633	-				+0.6
1,494,634	+				-2.3
1,494,634	+				+1.4
1,494,634	+				+1.5
1,494,634	+				-2.1
1,494,635	-				+0.8
1,494,635	-				-2.3
1,494,635	-				-0.3
1,494,635	-				-1.8
1,494,696	-				+0.1
1,494,696	-				-0.9
1,494,697	+				-2.6
1,494,697	+				-1.4
1,494,697	+				-1.3
1,494,697	+				-0.1
1,494,697	+				-0.4
1,494,697	+				-3.0
1,494,697	+				-0.5
1,494,697	+				-0.0
1,494,697	+				+0.8
1,494,698	-				-1.5
1,494,698	-				+0.8
1,494,698	-				+0.5
1,494,698	-				+0.8
1,494,698	-				-2.3
1,494,698	-				+0.2
1,494,728	+				+1.3
1,494,728	+				+0.4
1,494,728	+				+0.2
1,494,728	+				-2.5
1,494,729	-				-0.2
1,494,884	+		PfGW456L13_1349	0.42	-1.9
1,494,884	+		PfGW456L13_1349	0.42	+0.1
1,494,884	+		PfGW456L13_1349	0.42	-1.5
1,494,885	-		PfGW456L13_1349	0.42	+1.4
1,494,885	-		PfGW456L13_1349	0.42	-0.6
1,495,115	+				+0.8
1,495,115	+				-0.5
1,495,116	-				+2.0
1,495,142	+				-0.4
1,495,142	+				+1.5
1,495,142	+				+2.6
1,495,142	+				+2.0
1,495,143	-				-0.4
1,495,143	-				+2.1
1,495,177	+				-0.1
1,495,178	-				-2.2
1,495,179	+				-0.9
1,495,179	+				+1.4
1,495,179	+				-1.3
1,495,180	-				-3.1
1,495,180	-				-2.4
1,495,213	+				-0.0
1,495,214	-				+1.5
1,495,214	-				-0.6
1,495,214	-				+0.1
1,495,216	+				-0.3
1,495,216	+				-0.6
1,495,216	+				-0.8
1,495,216	+				+1.4
1,495,216	+				-1.8
1,495,216	+				-0.7
1,495,216	+				+0.2
1,495,216	+				+0.6
1,495,216	+				+0.9
1,495,216	+				+1.0
1,495,216	+				-0.9
1,495,216	+				+1.4
1,495,216	+				+0.0
1,495,217	-				-2.5
1,495,217	-				-0.6
1,495,217	-				-0.4
1,495,217	-				-2.2
1,495,217	-				+1.0
1,495,217	-				-3.2
1,495,217	-				-0.7
1,495,217	-				+0.4
1,495,217	-				-0.6
1,495,217	-				-0.5
1,495,217	-				+0.9
1,495,217	-				+1.6
1,495,221	+				+1.3
1,495,221	+				+1.4
1,495,221	+				-1.3
1,495,222	-				-2.1
1,495,222	-				+0.7
1,495,222	-				-1.2
1,495,222	-				+1.2
1,495,279	+				-1.0
1,495,279	+				+1.1
1,495,279	+				+1.8
1,495,280	-				+1.1
1,495,280	-				-0.4
1,495,280	-				-1.7
1,495,281	+				-2.4
1,495,296	+				-2.4
1,495,296	+				-0.4
1,495,296	+				+0.9
1,495,296	+				+0.4
1,495,296	+				-0.4
1,495,296	+				+0.6
1,495,296	+				+0.2
1,495,296	+				+0.9
1,495,296	+				+1.3
1,495,296	+				-0.7
1,495,296	+				-3.0
1,495,296	+				-1.5
1,495,296	+				+2.6
1,495,296	+				-2.0
1,495,296	+				-0.6
1,495,296	+				-0.5
1,495,296	+				-1.5
1,495,296	+				+0.9
1,495,296	+				+0.6
1,495,296	+				+0.2
1,495,296	+				-0.3
1,495,297	-				-0.9
1,495,297	-				+0.1
1,495,297	-				+0.9
1,495,297	-				+0.1
1,495,297	-				-3.0
1,495,297	-				+0.6
1,495,297	-				+0.5
1,495,297	-				-0.8
1,495,297	-				-2.3
1,495,297	-				-0.5
1,495,297	-				-1.7
1,495,297	-				+1.3
1,495,297	-				+0.3
1,495,297	-				+1.1
1,495,297	-				+1.8
1,495,297	-				-0.5
1,495,297	-				+1.0
1,495,297	-				+2.6
1,495,297	-				+1.1
1,495,297	-				+1.4
1,495,298	+				-3.1
1,495,298	+				-0.4
1,495,299	-				-3.4
1,495,460	+		PfGW456L13_1350	0.32	+1.1
1,495,460	+		PfGW456L13_1350	0.32	+0.8
1,495,461	-		PfGW456L13_1350	0.33	+2.2
1,495,461	-		PfGW456L13_1350	0.33	-2.3
1,495,461	-		PfGW456L13_1350	0.33	-1.2
1,495,511	-		PfGW456L13_1350	0.46	+0.4
1,495,568	+		PfGW456L13_1350	0.62	+0.2
1,495,568	+		PfGW456L13_1350	0.62	+0.4