Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1340

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,481,697	+				+0.3
1,481,697	+				+0.4
1,481,697	+				-1.2
1,481,697	+				-0.2
1,481,698	-				-0.2
1,481,698	-				+0.4
1,481,698	-				+1.5
1,481,698	-				+1.7
1,481,698	-				-3.2
1,481,723	+				-0.3
1,481,723	+				-2.7
1,481,723	+				+0.2
1,481,723	+				+0.3
1,481,723	+				+0.8
1,481,723	+				+0.8
1,481,723	+				+1.5
1,481,723	+				-1.0
1,481,723	+				-2.4
1,481,723	+				-2.2
1,481,723	+				+0.2
1,481,723	+				-0.1
1,481,723	+				-2.0
1,481,723	+				+1.3
1,481,723	+				+2.4
1,481,723	+				-1.2
1,481,723	+				+0.4
1,481,724	-				+0.1
1,481,724	-				-2.3
1,481,724	-				+0.8
1,481,724	-				+0.2
1,481,724	-				-1.7
1,481,724	-				+1.6
1,481,724	-				-0.4
1,481,724	-				-0.9
1,481,724	-				-0.4
1,481,784	+				+1.4
1,481,942	+		PfGW456L13_1339	0.16	+0.1
1,481,942	+		PfGW456L13_1339	0.16	+1.4
1,481,943	-		PfGW456L13_1339	0.16	+0.9
1,481,943	-		PfGW456L13_1339	0.16	-0.6
1,481,969	+		PfGW456L13_1339	0.19	+0.6
1,481,969	+		PfGW456L13_1339	0.19	-1.6
1,481,969	+		PfGW456L13_1339	0.19	+1.1
1,482,006	+		PfGW456L13_1339	0.24	+1.2
1,482,006	+		PfGW456L13_1339	0.24	+1.2
1,482,006	+		PfGW456L13_1339	0.24	-0.1
1,482,007	-		PfGW456L13_1339	0.24	-2.0
1,482,007	-		PfGW456L13_1339	0.24	+0.6
1,482,007	-		PfGW456L13_1339	0.24	+4.8
1,482,007	-		PfGW456L13_1339	0.24	-1.3
1,482,012	-		PfGW456L13_1339	0.25	-2.3
1,482,041	+		PfGW456L13_1339	0.28	+0.5
1,482,042	-		PfGW456L13_1339	0.28	-0.1
1,482,042	-		PfGW456L13_1339	0.28	-0.3
1,482,042	-		PfGW456L13_1339	0.28	-1.4
1,482,042	-		PfGW456L13_1339	0.28	-1.5
1,482,050	+		PfGW456L13_1339	0.29	-1.0
1,482,050	+		PfGW456L13_1339	0.29	-1.3
1,482,050	+		PfGW456L13_1339	0.29	+0.4
1,482,050	+		PfGW456L13_1339	0.29	-2.5
1,482,050	+		PfGW456L13_1339	0.29	+1.1
1,482,051	-		PfGW456L13_1339	0.29	-0.4
1,482,051	-		PfGW456L13_1339	0.29	+0.2
1,482,051	-		PfGW456L13_1339	0.29	-1.0
1,482,051	-		PfGW456L13_1339	0.29	+0.1
1,482,052	+		PfGW456L13_1339	0.29	+0.9
1,482,052	+		PfGW456L13_1339	0.29	+0.2
1,482,052	+		PfGW456L13_1339	0.29	+0.8
1,482,052	+		PfGW456L13_1339	0.29	-0.5
1,482,052	+		PfGW456L13_1339	0.29	+1.5
1,482,053	-		PfGW456L13_1339	0.30	+1.1
1,482,166	+		PfGW456L13_1339	0.43	-0.7
1,482,166	+		PfGW456L13_1339	0.43	-1.3
1,482,166	+		PfGW456L13_1339	0.43	+0.5
1,482,167	-		PfGW456L13_1339	0.43	-0.9
1,482,173	-		PfGW456L13_1339	0.44	-0.7
1,482,240	+		PfGW456L13_1339	0.52	-1.3
1,482,240	+		PfGW456L13_1339	0.52	-0.9
1,482,241	-		PfGW456L13_1339	0.52	-0.5
1,482,383	+		PfGW456L13_1339	0.70	+0.3
1,482,383	+		PfGW456L13_1339	0.70	+0.9
1,482,383	+		PfGW456L13_1339	0.70	-1.4
1,482,383	+		PfGW456L13_1339	0.70	+0.8
1,482,383	+		PfGW456L13_1339	0.70	-1.5
1,482,383	+		PfGW456L13_1339	0.70	-1.5
1,482,383	+		PfGW456L13_1339	0.70	-1.7
1,482,383	+		PfGW456L13_1339	0.70	+1.8
1,482,384	-		PfGW456L13_1339	0.70	-2.2
1,482,384	-		PfGW456L13_1339	0.70	+1.5
1,482,509	+		PfGW456L13_1339	0.85	-2.2
1,482,510	-		PfGW456L13_1339	0.85	+2.6
1,482,510	-		PfGW456L13_1339	0.85	-0.3
1,482,589	+				-0.8
1,482,589	+				-1.6
1,482,589	+				+0.4
1,482,622	+				-0.3
1,482,622	+				+1.2
1,482,622	+				+0.2
1,482,628	-				+1.0
1,482,628	-				-2.5
1,482,628	-				-0.5
1,482,820	+		PfGW456L13_1340	0.13	-1.7
1,482,820	+		PfGW456L13_1340	0.13	+0.8
1,482,821	-		PfGW456L13_1340	0.13	-1.8
1,482,821	-		PfGW456L13_1340	0.13	-1.1
1,482,937	+		PfGW456L13_1340	0.21	-0.6
1,482,937	+		PfGW456L13_1340	0.21	-2.0
1,482,937	+		PfGW456L13_1340	0.21	+0.8
1,482,938	-		PfGW456L13_1340	0.21	-0.4
1,483,024	+		PfGW456L13_1340	0.27	-0.2
1,483,024	+		PfGW456L13_1340	0.27	-2.8
1,483,024	+		PfGW456L13_1340	0.27	+0.7
1,483,024	+		PfGW456L13_1340	0.27	-0.1
1,483,024	+		PfGW456L13_1340	0.27	-0.2
1,483,025	-		PfGW456L13_1340	0.27	-1.7
1,483,025	-		PfGW456L13_1340	0.27	+0.3
1,483,025	-		PfGW456L13_1340	0.27	+0.6
1,483,025	-		PfGW456L13_1340	0.27	-2.9
1,483,025	-		PfGW456L13_1340	0.27	+2.4
1,483,030	+		PfGW456L13_1340	0.28	-0.1
1,483,031	-		PfGW456L13_1340	0.28	-2.2
1,483,096	+		PfGW456L13_1340	0.33	+0.3
1,483,177	+		PfGW456L13_1340	0.38	+1.4
1,483,177	+		PfGW456L13_1340	0.38	+0.4
1,483,177	+		PfGW456L13_1340	0.38	-1.0
1,483,177	+		PfGW456L13_1340	0.38	+1.4
1,483,178	-		PfGW456L13_1340	0.38	+0.4
1,483,242	+		PfGW456L13_1340	0.43	-0.2
1,483,242	+		PfGW456L13_1340	0.43	-1.8
1,483,242	+		PfGW456L13_1340	0.43	-1.0
1,483,242	+		PfGW456L13_1340	0.43	+1.5
1,483,242	+		PfGW456L13_1340	0.43	-0.3
1,483,242	+		PfGW456L13_1340	0.43	+2.8
1,483,242	+		PfGW456L13_1340	0.43	-1.0
1,483,242	+		PfGW456L13_1340	0.43	-1.6
1,483,243	-		PfGW456L13_1340	0.43	+1.4
1,483,243	-		PfGW456L13_1340	0.43	-0.1
1,483,243	-		PfGW456L13_1340	0.43	-1.7
1,483,243	-		PfGW456L13_1340	0.43	-0.0
1,483,243	-		PfGW456L13_1340	0.43	-0.9
1,483,243	-		PfGW456L13_1340	0.43	-0.4
1,483,243	-		PfGW456L13_1340	0.43	-1.7
1,483,243	-		PfGW456L13_1340	0.43	-2.0
1,483,243	-		PfGW456L13_1340	0.43	+0.4
1,483,243	-		PfGW456L13_1340	0.43	-1.2
1,483,244	+		PfGW456L13_1340	0.43	-1.1
1,483,244	+		PfGW456L13_1340	0.43	+1.4
1,483,244	+		PfGW456L13_1340	0.43	-0.1
1,483,245	-		PfGW456L13_1340	0.43	+1.7
1,483,245	-		PfGW456L13_1340	0.43	+0.4
1,483,245	-		PfGW456L13_1340	0.43	+1.8
1,483,834	+		PfGW456L13_1340	0.85	+1.2
1,483,834	+		PfGW456L13_1340	0.85	+0.2
1,483,834	+		PfGW456L13_1340	0.85	+1.6
1,483,835	-		PfGW456L13_1340	0.86	-3.0
1,483,999	+				+1.3
1,484,000	-				+1.1
1,484,026	+				-2.9
1,484,026	+				+0.1
1,484,026	+				-2.3
1,484,027	-				-1.3
1,484,027	-				+1.7
1,484,027	-				-1.7
1,484,027	-				+2.4
1,484,027	-				-1.5
1,484,027	-				+2.3
1,484,027	-				-2.0
1,484,027	-				+2.2
1,484,028	+				+1.8
1,484,028	+				-3.3
1,484,028	+				+0.8
1,484,028	+				-0.4
1,484,028	+				+1.4
1,484,028	+				-0.8
1,484,028	+				-2.2
1,484,028	+				-1.9
1,484,028	+				+1.1
1,484,028	+				-1.2
1,484,028	+				-0.6
1,484,028	+				-0.2
1,484,028	+				-2.0
1,484,028	+				+1.0
1,484,028	+				+0.7
1,484,029	-				+0.4
1,484,029	-				+0.0
1,484,029	-				+1.8
1,484,029	-				-0.7
1,484,029	-				+0.5
1,484,029	-				-2.9
1,484,029	-				-0.7
1,484,029	-				-0.6
1,484,060	+				-0.2
1,484,060	+				-0.8
1,484,060	+				+1.9
1,484,061	-				+0.1
1,484,061	-				+1.1
1,484,061	-				+0.7
1,484,064	+				-0.2
1,484,064	+				+1.1
1,484,064	+				-2.6
1,484,064	+				-1.4
1,484,064	+				-2.0
1,484,064	+				-0.2
1,484,064	+				+1.2
1,484,064	+				+0.3
1,484,064	+				+0.3
1,484,064	+				-2.8
1,484,064	+				-1.5
1,484,065	-				-0.4
1,484,065	-				+0.2
1,484,065	-				-1.2
1,484,065	-				-1.2
1,484,065	-				+0.6
1,484,065	-				+2.1
1,484,192	-				+1.9
1,484,192	-				+0.7
1,484,234	+				+0.5
1,484,247	-				-2.2
1,484,247	-				-0.3
1,484,293	+				-1.3
1,484,293	+				-1.3
1,484,293	+				-2.1
1,484,293	+				+1.0
1,484,294	-				-2.1
1,484,294	-				+1.4
1,484,294	-				-3.7
1,484,453	+		PfGW456L13_1341	0.16	-0.6
1,484,454	-		PfGW456L13_1341	0.16	+0.4
1,484,454	-		PfGW456L13_1341	0.16	+0.3
1,484,477	+		PfGW456L13_1341	0.18	+0.1
1,484,477	+		PfGW456L13_1341	0.18	-2.3
1,484,477	+		PfGW456L13_1341	0.18	-0.4
1,484,477	+		PfGW456L13_1341	0.18	+1.3
1,484,478	-		PfGW456L13_1341	0.18	+0.8
1,484,478	-		PfGW456L13_1341	0.18	+1.6
1,484,478	-		PfGW456L13_1341	0.18	-0.4
1,484,478	-		PfGW456L13_1341	0.18	-1.2
1,484,478	-		PfGW456L13_1341	0.18	-1.7
1,484,488	+		PfGW456L13_1341	0.19	+1.6
1,484,488	+		PfGW456L13_1341	0.19	-2.5
1,484,488	+		PfGW456L13_1341	0.19	-0.4
1,484,488	+		PfGW456L13_1341	0.19	+1.2
1,484,488	+		PfGW456L13_1341	0.19	-1.2
1,484,488	+		PfGW456L13_1341	0.19	+0.4
1,484,488	+		PfGW456L13_1341	0.19	-0.4
1,484,488	+		PfGW456L13_1341	0.19	-2.3
1,484,488	+		PfGW456L13_1341	0.19	-2.8
1,484,488	+		PfGW456L13_1341	0.19	-0.2
1,484,489	-		PfGW456L13_1341	0.19	-0.1
1,484,489	-		PfGW456L13_1341	0.19	+0.1
1,484,489	-		PfGW456L13_1341	0.19	-0.9
1,484,489	-		PfGW456L13_1341	0.19	+1.5
1,484,489	-		PfGW456L13_1341	0.19	+2.2
1,484,489	-		PfGW456L13_1341	0.19	-2.8
1,484,489	-		PfGW456L13_1341	0.19	-1.7
1,484,489	-		PfGW456L13_1341	0.19	-1.0
1,484,489	-		PfGW456L13_1341	0.19	-2.2
1,484,489	-		PfGW456L13_1341	0.19	-3.1
1,484,489	-		PfGW456L13_1341	0.19	+0.8
1,484,489	-		PfGW456L13_1341	0.19	-2.0
1,484,489	-		PfGW456L13_1341	0.19	+0.0
1,484,489	-		PfGW456L13_1341	0.19	-2.3
1,484,489	-		PfGW456L13_1341	0.19	+1.9
1,484,489	-		PfGW456L13_1341	0.19	-1.7
1,484,489	-		PfGW456L13_1341	0.19	-0.2
1,484,489	-		PfGW456L13_1341	0.19	+1.4
1,484,573	-		PfGW456L13_1341	0.25	-0.5
1,484,573	-		PfGW456L13_1341	0.25	-1.7
1,484,573	-		PfGW456L13_1341	0.25	+1.6
1,484,573	-		PfGW456L13_1341	0.25	+0.5
1,484,751	+		PfGW456L13_1341	0.38	+1.3
1,484,751	+		PfGW456L13_1341	0.38	+0.8
1,484,751	+		PfGW456L13_1341	0.38	+0.8
1,484,752	-		PfGW456L13_1341	0.38	-2.9
1,484,752	-		PfGW456L13_1341	0.38	+1.4
1,484,752	-		PfGW456L13_1341	0.38	-2.7
1,484,752	-		PfGW456L13_1341	0.38	-0.3
1,484,911	+		PfGW456L13_1341	0.50	+1.1
1,484,911	+		PfGW456L13_1341	0.50	-2.5
1,484,911	+		PfGW456L13_1341	0.50	+2.1
1,484,911	+		PfGW456L13_1341	0.50	-3.1
1,484,911	+		PfGW456L13_1341	0.50	+0.1
1,484,912	-		PfGW456L13_1341	0.50	-0.4
1,484,912	-		PfGW456L13_1341	0.50	+0.5
1,484,912	-		PfGW456L13_1341	0.50	+0.7
1,484,912	-		PfGW456L13_1341	0.50	+0.3
1,484,912	-		PfGW456L13_1341	0.50	+0.3
1,484,912	-		PfGW456L13_1341	0.50	+2.6
1,484,912	-		PfGW456L13_1341	0.50	-1.6
1,484,912	-		PfGW456L13_1341	0.50	-3.5
1,484,912	-		PfGW456L13_1341	0.50	-0.0
1,484,912	-		PfGW456L13_1341	0.50	-1.7