Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1212

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,353,343	+		PfGW456L13_1211	0.38	+2.2
1,353,343	+		PfGW456L13_1211	0.38	+0.1
1,353,430	-		PfGW456L13_1211	0.46	+0.8
1,353,442	+		PfGW456L13_1211	0.47	-0.7
1,353,442	+		PfGW456L13_1211	0.47	+1.0
1,353,442	+		PfGW456L13_1211	0.47	+2.2
1,353,442	+		PfGW456L13_1211	0.47	+1.7
1,353,442	+		PfGW456L13_1211	0.47	-0.7
1,353,442	+		PfGW456L13_1211	0.47	+0.8
1,353,442	+		PfGW456L13_1211	0.47	-0.8
1,353,443	-		PfGW456L13_1211	0.48	-0.9
1,353,443	-		PfGW456L13_1211	0.48	-2.8
1,353,443	-		PfGW456L13_1211	0.48	-2.1
1,353,443	-		PfGW456L13_1211	0.48	-0.8
1,353,443	-		PfGW456L13_1211	0.48	-0.4
1,353,494	-		PfGW456L13_1211	0.52	+0.1
1,353,494	-		PfGW456L13_1211	0.52	-1.7
1,353,598	+		PfGW456L13_1211	0.62	+0.4
1,353,598	+		PfGW456L13_1211	0.62	-2.6
1,353,599	-		PfGW456L13_1211	0.62	+1.8
1,353,635	-		PfGW456L13_1211	0.66	+2.2
1,353,700	+		PfGW456L13_1211	0.72	-1.0
1,353,700	+		PfGW456L13_1211	0.72	+0.1
1,353,701	-		PfGW456L13_1211	0.72	+0.8
1,353,782	+		PfGW456L13_1211	0.80	-0.5
1,353,805	+		PfGW456L13_1211	0.82	-0.1
1,353,805	+		PfGW456L13_1211	0.82	-3.0
1,353,805	+		PfGW456L13_1211	0.82	+0.3
1,353,805	+		PfGW456L13_1211	0.82	-2.2
1,353,805	+		PfGW456L13_1211	0.82	-1.2
1,353,806	-		PfGW456L13_1211	0.82	+1.0
1,353,988	+				-0.3
1,354,058	+				+0.3
1,354,058	+				+0.8
1,354,058	+				-1.4
1,354,059	-				+0.2
1,354,059	-				+0.0
1,354,059	-				-0.2
1,354,059	-				-2.0
1,354,199	+				-3.2
1,354,199	+				+0.3
1,354,199	+				+0.6
1,354,199	+				-0.5
1,354,200	-				-1.3
1,354,200	-				-1.5
1,354,364	+		PfGW456L13_1212	0.13	-2.0
1,354,364	+		PfGW456L13_1212	0.13	-2.2
1,354,365	-		PfGW456L13_1212	0.13	-1.7
1,354,365	-		PfGW456L13_1212	0.13	-0.9
1,354,463	+		PfGW456L13_1212	0.21	-0.6
1,354,613	+		PfGW456L13_1212	0.33	-1.7
1,354,613	+		PfGW456L13_1212	0.33	-0.2
1,354,613	+		PfGW456L13_1212	0.33	-0.3
1,354,613	+		PfGW456L13_1212	0.33	+0.2
1,354,613	+		PfGW456L13_1212	0.33	-0.2
1,354,613	+		PfGW456L13_1212	0.33	-1.7
1,354,614	-		PfGW456L13_1212	0.33	-0.8
1,354,614	-		PfGW456L13_1212	0.33	-0.9
1,354,615	+		PfGW456L13_1212	0.33	+1.7
1,354,616	-		PfGW456L13_1212	0.33	-2.5
1,354,703	+		PfGW456L13_1212	0.40	-2.7
1,354,703	+		PfGW456L13_1212	0.40	-0.8
1,354,706	+		PfGW456L13_1212	0.40	-0.3
1,354,706	+		PfGW456L13_1212	0.40	-1.3
1,354,706	+		PfGW456L13_1212	0.40	-1.0
1,354,706	+		PfGW456L13_1212	0.40	-0.2
1,354,707	-		PfGW456L13_1212	0.40	-0.6
1,354,707	-		PfGW456L13_1212	0.40	-0.9
1,354,707	-		PfGW456L13_1212	0.40	+0.8
1,354,707	-		PfGW456L13_1212	0.40	-0.6
1,354,707	-		PfGW456L13_1212	0.40	-0.4
1,354,782	-		PfGW456L13_1212	0.46	-2.8
1,354,782	-		PfGW456L13_1212	0.46	-2.9
1,354,782	-		PfGW456L13_1212	0.46	-2.3
1,354,782	-		PfGW456L13_1212	0.46	-2.3
1,354,862	+		PfGW456L13_1212	0.53	-1.2
1,354,862	+		PfGW456L13_1212	0.53	-0.2
1,354,862	+		PfGW456L13_1212	0.53	+2.5
1,354,862	+		PfGW456L13_1212	0.53	-0.1
1,354,863	-		PfGW456L13_1212	0.53	+3.5
1,354,863	-		PfGW456L13_1212	0.53	+1.8
1,354,945	-		PfGW456L13_1212	0.59	-1.7
1,355,060	+		PfGW456L13_1212	0.69	+0.3
1,355,060	+		PfGW456L13_1212	0.69	+1.2
1,355,061	-		PfGW456L13_1212	0.69	-1.8
1,355,061	-		PfGW456L13_1212	0.69	-0.9
1,355,061	-		PfGW456L13_1212	0.69	+2.2
1,355,108	+		PfGW456L13_1212	0.72	+0.1
1,355,108	+		PfGW456L13_1212	0.72	+0.5
1,355,108	+		PfGW456L13_1212	0.72	-0.6
1,355,108	+		PfGW456L13_1212	0.72	-1.7
1,355,109	-		PfGW456L13_1212	0.72	-1.7
1,355,109	-		PfGW456L13_1212	0.72	-1.0
1,355,109	-		PfGW456L13_1212	0.72	-3.2
1,355,109	-		PfGW456L13_1212	0.72	+1.3
1,355,109	-		PfGW456L13_1212	0.72	-1.3
1,355,109	-		PfGW456L13_1212	0.72	-2.4
1,355,109	-		PfGW456L13_1212	0.72	-0.1
1,355,109	-		PfGW456L13_1212	0.72	-2.7
1,355,109	-		PfGW456L13_1212	0.72	-2.5
1,355,139	-		PfGW456L13_1212	0.75	+1.1
1,355,139	-		PfGW456L13_1212	0.75	-1.7
1,355,139	-		PfGW456L13_1212	0.75	-1.7
1,355,139	-		PfGW456L13_1212	0.75	-0.8
1,355,139	-		PfGW456L13_1212	0.75	-0.9
1,355,139	-		PfGW456L13_1212	0.75	-1.6
1,355,195	+		PfGW456L13_1212	0.79	+0.3
1,355,195	+		PfGW456L13_1212	0.79	+1.6
1,355,195	+		PfGW456L13_1212	0.79	+2.0
1,355,195	+		PfGW456L13_1212	0.79	-0.9
1,355,195	+		PfGW456L13_1212	0.79	-2.2
1,355,195	+		PfGW456L13_1212	0.79	-0.8
1,355,196	-		PfGW456L13_1212	0.79	-1.4
1,355,196	-		PfGW456L13_1212	0.79	-2.0
1,355,196	-		PfGW456L13_1212	0.79	+1.1
1,355,196	-		PfGW456L13_1212	0.79	+2.6
1,355,196	-		PfGW456L13_1212	0.79	+0.1
1,355,210	+		PfGW456L13_1212	0.81	-1.0
1,355,210	+		PfGW456L13_1212	0.81	+0.9
1,355,210	+		PfGW456L13_1212	0.81	-1.7
1,355,210	+		PfGW456L13_1212	0.81	-1.6
1,355,210	+		PfGW456L13_1212	0.81	-1.6
1,355,210	+		PfGW456L13_1212	0.81	-2.4
1,355,211	-		PfGW456L13_1212	0.81	+2.9
1,355,211	-		PfGW456L13_1212	0.81	+0.5
1,355,211	-		PfGW456L13_1212	0.81	-1.7
1,355,211	-		PfGW456L13_1212	0.81	-1.7
1,355,262	-		PfGW456L13_1212	0.85	-1.6
1,355,264	+		PfGW456L13_1212	0.85	-1.1
1,355,264	+		PfGW456L13_1212	0.85	+0.1
1,355,264	+		PfGW456L13_1212	0.85	+0.7
1,355,264	+		PfGW456L13_1212	0.85	-1.5
1,355,264	+		PfGW456L13_1212	0.85	-0.3
1,355,264	+		PfGW456L13_1212	0.85	+1.7
1,355,264	+		PfGW456L13_1212	0.85	+0.0
1,355,264	+		PfGW456L13_1212	0.85	-1.1
1,355,264	+		PfGW456L13_1212	0.85	+1.3
1,355,265	-		PfGW456L13_1212	0.85	-1.4
1,355,265	-		PfGW456L13_1212	0.85	-1.9
1,355,265	-		PfGW456L13_1212	0.85	-2.7
1,355,265	-		PfGW456L13_1212	0.85	+0.1
1,355,265	-		PfGW456L13_1212	0.85	-2.0
1,355,265	-		PfGW456L13_1212	0.85	-2.4
1,355,265	-		PfGW456L13_1212	0.85	+1.4
1,355,265	-		PfGW456L13_1212	0.85	-0.8
1,355,265	-		PfGW456L13_1212	0.85	-1.0
1,355,265	-		PfGW456L13_1212	0.85	-1.2
1,355,265	-		PfGW456L13_1212	0.85	-2.9
1,355,265	-		PfGW456L13_1212	0.85	+0.4
1,355,265	-		PfGW456L13_1212	0.85	+0.2
1,355,265	-		PfGW456L13_1212	0.85	-2.4
1,355,265	-		PfGW456L13_1212	0.85	-3.5
1,355,312	+		PfGW456L13_1212	0.89	+0.3
1,355,312	+		PfGW456L13_1212	0.89	-1.2
1,355,312	+		PfGW456L13_1212	0.89	-0.9
1,355,312	+		PfGW456L13_1212	0.89	-0.0
1,355,312	+		PfGW456L13_1212	0.89	-0.4
1,355,312	+		PfGW456L13_1212	0.89	-1.4
1,355,312	+		PfGW456L13_1212	0.89	+0.1
1,355,312	+		PfGW456L13_1212	0.89	+0.5
1,355,312	+		PfGW456L13_1212	0.89	-0.3
1,355,312	+		PfGW456L13_1212	0.89	+0.9
1,355,313	-		PfGW456L13_1212	0.89	+1.2
1,355,313	-		PfGW456L13_1212	0.89	+1.8
1,355,313	-		PfGW456L13_1212	0.89	-0.4
1,355,327	+		PfGW456L13_1212	0.90	-1.5
1,355,327	+		PfGW456L13_1212	0.90	+0.6
1,355,327	+		PfGW456L13_1212	0.90	+0.8
1,355,328	-				-2.3
1,355,328	-				-0.6
1,355,328	-				-0.5
1,355,328	-				-1.4
1,355,402	+				-1.9
1,355,402	+				+0.3
1,355,403	-				+4.0
1,355,411	+				+1.0
1,355,411	+				-2.3
1,355,411	+				-1.8
1,355,412	-				+0.5
1,355,412	-				-0.2
1,355,450	+				+1.1
1,355,450	+				+0.5
1,355,451	-				-0.7
1,355,451	-				-0.5
1,355,477	+				+0.4
1,355,477	+				-1.8
1,355,477	+				-1.7
1,355,477	+				-2.2
1,355,477	+				+0.0
1,355,477	+				-1.0
1,355,477	+				+0.5
1,355,477	+				-0.2
1,355,477	+				-0.1
1,355,477	+				-1.7
1,355,477	+				+0.8
1,355,477	+				+0.7
1,355,477	+				-0.3
1,355,477	+				+0.1
1,355,478	-				-1.8
1,355,478	-				-0.1
1,355,478	-				-0.9
1,355,478	-				-0.4
1,355,478	-				-0.7
1,355,478	-				-2.4
1,355,478	-				+0.0
1,355,478	-				+0.1
1,355,478	-				+0.1
1,355,478	-				+0.1
1,355,478	-				+0.3
1,355,478	-				-0.6
1,355,478	-				-2.0
1,355,478	-				+0.2
1,355,478	-				-0.7
1,355,478	-				-2.0
1,355,479	+				-1.5
1,355,479	+				-2.3
1,355,479	+				+0.3
1,355,479	+				+1.9
1,355,479	+				+1.1
1,355,479	+				-0.1
1,355,479	+				+1.1
1,355,479	+				-0.9
1,355,480	-				-0.5
1,355,480	-				+0.6
1,355,480	-				-1.4
1,355,480	-				+1.3
1,355,480	-				-2.3
1,355,480	-				-0.7
1,355,480	-				-0.9
1,355,480	-				+0.6
1,355,480	-				-0.9
1,355,480	-				-0.6
1,355,480	-				-0.9
1,355,480	-				+0.5
1,355,480	-				+1.4
1,355,480	-				-2.2
1,355,480	-				+0.3
1,355,480	-				-0.2
1,355,480	-				-2.1
1,355,480	-				-1.7
1,355,480	-				+0.1
1,355,480	-				-0.7
1,355,480	-				+0.6
1,355,507	+				-1.7
1,355,507	+				-3.1
1,355,507	+				-0.4
1,355,507	+				+0.4
1,355,508	-				+0.3
1,355,508	-				+0.7
1,355,637	-		PfGW456L13_1213	0.21	-2.0
1,355,637	-		PfGW456L13_1213	0.21	-2.5
1,355,843	+		PfGW456L13_1213	0.46	-0.7
1,355,843	+		PfGW456L13_1213	0.46	+1.7
1,355,843	+		PfGW456L13_1213	0.46	-0.2
1,355,843	+		PfGW456L13_1213	0.46	+1.0
1,355,843	+				+1.4
1,355,843	+		PfGW456L13_1213	0.46	-0.2
1,355,843	+		PfGW456L13_1213	0.46	-2.0
1,355,843	+		PfGW456L13_1213	0.46	-0.1
1,355,843	+		PfGW456L13_1213	0.46	-2.0
1,355,843	+		PfGW456L13_1213	0.46	-1.9
1,355,844	-		PfGW456L13_1213	0.46	-2.7
1,355,844	-		PfGW456L13_1213	0.46	+0.1
1,355,844	-		PfGW456L13_1213	0.46	-0.3
1,355,844	-		PfGW456L13_1213	0.46	-0.3
1,355,844	-		PfGW456L13_1213	0.46	-2.0
1,355,844	-		PfGW456L13_1213	0.46	+0.0
1,355,872	+		PfGW456L13_1213	0.49	-1.3
1,356,317	+				+0.3
1,356,317	+				-1.9
1,356,318	-				+0.1
1,356,318	-				-0.3
1,356,318	-				-1.0
1,356,411	+				-0.4
1,356,411	+				-1.2
1,356,412	-				-0.8
1,356,412	-				+0.5
1,356,412	-				+0.4
1,356,412	-				+0.8