Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4191

Experiment: Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4190 and EX28DRAFT_4191 are separated by 69 nucleotides EX28DRAFT_4190: EX28DRAFT_4190 - translation elongation factor EF-G, at 169,664 to 171,778 _4190 EX28DRAFT_4191: EX28DRAFT_4191 - small GTP-binding protein domain, at 171,848 to 172,629 _4191 Position (kb) 171 172 173Strain fitness (log2 ratio) -2 -1 0 1at 172.442 kb on + strand, within EX28DRAFT_4191

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
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172,442 + EX28DRAFT_4191 0.76 -1.9

Or see this region's nucleotide sequence