Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS08760

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,689,267	-		ABIE40_RS08745	0.40	+2.7
1,689,267	-		ABIE40_RS08745	0.40	+1.6
1,689,278	+		ABIE40_RS08745	0.42	+0.5
1,689,278	+		ABIE40_RS08745	0.42	+3.1
1,689,278	+		ABIE40_RS08745	0.42	+3.5
1,689,279	-		ABIE40_RS08745	0.42	+2.1
1,689,279	-		ABIE40_RS08745	0.42	+1.3
1,689,473	+		ABIE40_RS08745	0.82	+0.1
1,689,474	-		ABIE40_RS08745	0.82	+0.4
1,689,474	-		ABIE40_RS08745	0.82	+4.8
1,689,474	-		ABIE40_RS08745	0.82	+0.7
1,689,560	+				+2.3
1,689,560	+				-0.3
1,689,560	+				-1.2
1,689,561	-				+0.6
1,689,579	+				-1.0
1,689,580	-				+0.6
1,689,580	-				-0.5
1,689,580	-				-0.6
1,689,580	-				-0.9
1,689,580	-				+1.5
1,689,669	+		ABIE40_RS08750	0.43	-0.2
1,689,669	+		ABIE40_RS08750	0.43	-0.3
1,689,669	+		ABIE40_RS08750	0.43	-0.0
1,689,670	-		ABIE40_RS08750	0.44	+0.4
1,689,670	-		ABIE40_RS08750	0.44	-1.0
1,689,670	-		ABIE40_RS08750	0.44	-2.7
1,689,670	-		ABIE40_RS08750	0.44	+1.1
1,689,670	-		ABIE40_RS08750	0.44	+2.3
1,689,670	-		ABIE40_RS08750	0.44	-0.1
1,689,696	+		ABIE40_RS08750	0.56	+1.3
1,689,696	+		ABIE40_RS08750	0.56	+0.8
1,689,696	+		ABIE40_RS08750	0.56	-1.3
1,689,696	+		ABIE40_RS08750	0.56	-0.1
1,689,697	-		ABIE40_RS08750	0.57	+1.9
1,689,697	-		ABIE40_RS08750	0.57	-1.0
1,689,827	+				+0.7
1,689,827	+				-1.9
1,689,828	-				-1.2
1,689,935	-				+0.5
1,689,935	-				-0.4
1,690,009	+				+0.2
1,690,009	+				-0.1
1,690,010	-				-2.3
1,690,010	-				-1.6
1,690,010	-				+0.2
1,690,010	-				+0.7
1,690,071	+				-1.1
1,690,071	+				+0.3
1,690,072	-				-0.8
1,690,072	-				-1.8
1,690,072	-				+0.2
1,690,072	-				-2.9
1,690,072	-				+1.2
1,690,101	+				-3.3
1,690,101	+				+0.9
1,690,101	+				-0.3
1,690,102	-				-1.2
1,690,180	+				+1.3
1,690,180	+				+0.1
1,690,180	+				-0.5
1,690,181	-				+1.6
1,690,181	-				+1.2
1,690,181	-				+0.8
1,690,181	-				+0.1
1,690,181	-				-0.5
1,690,201	+				-0.7
1,690,201	+				-1.0
1,690,202	-				+0.7
1,690,202	-				-1.3
1,690,222	+				-0.3
1,690,222	+				+3.2
1,690,222	+				+0.5
1,690,222	+				+1.9
1,690,222	+				+0.4
1,690,222	+				+1.6
1,690,223	-				+0.6
1,690,223	-				-1.0
1,690,223	-				+0.4
1,690,223	-				-1.0
1,690,223	-				-1.0
1,690,223	-				+0.1
1,690,223	-				-0.5
1,690,223	-				-0.3
1,690,223	-				+1.0
1,690,223	-				-0.1
1,690,228	+				+1.0
1,690,229	-				-0.9
1,690,229	-				-1.3
1,690,318	+		ABIE40_RS08760	0.13	-1.7
1,690,319	-		ABIE40_RS08760	0.13	+0.2
1,690,480	+		ABIE40_RS08760	0.23	-0.2
1,690,480	+		ABIE40_RS08760	0.23	+1.3
1,690,480	+		ABIE40_RS08760	0.23	+0.1
1,690,480	+		ABIE40_RS08760	0.23	-0.4
1,690,480	+		ABIE40_RS08760	0.23	+1.1
1,690,480	+		ABIE40_RS08760	0.23	-0.5
1,690,480	+		ABIE40_RS08760	0.23	+1.5
1,690,480	+		ABIE40_RS08760	0.23	+0.2
1,690,480	+		ABIE40_RS08760	0.23	+0.9
1,690,480	+		ABIE40_RS08760	0.23	+0.7
1,690,480	+		ABIE40_RS08760	0.23	-0.9
1,690,480	+		ABIE40_RS08760	0.23	+0.4
1,690,480	+		ABIE40_RS08760	0.23	+0.5
1,690,480	+		ABIE40_RS08760	0.23	-1.8
1,690,481	-		ABIE40_RS08760	0.23	+1.3
1,690,481	-		ABIE40_RS08760	0.23	-0.5
1,690,481	-		ABIE40_RS08760	0.23	-0.2
1,690,481	-		ABIE40_RS08760	0.23	+0.5
1,690,481	-		ABIE40_RS08760	0.23	+0.6
1,690,624	+		ABIE40_RS08760	0.31	+1.0
1,690,633	+		ABIE40_RS08760	0.32	-2.5
1,690,633	+		ABIE40_RS08760	0.32	-1.5
1,690,633	+		ABIE40_RS08760	0.32	-0.5
1,690,633	+		ABIE40_RS08760	0.32	+5.0
1,690,633	+		ABIE40_RS08760	0.32	+1.6
1,690,633	+		ABIE40_RS08760	0.32	+0.6
1,690,633	+		ABIE40_RS08760	0.32	+1.0
1,690,633	+		ABIE40_RS08760	0.32	-1.4
1,690,634	-		ABIE40_RS08760	0.32	-2.1
1,690,634	-		ABIE40_RS08760	0.32	-3.0
1,690,708	+		ABIE40_RS08760	0.37	+1.5
1,690,708	+		ABIE40_RS08760	0.37	+0.9
1,690,708	+		ABIE40_RS08760	0.37	-0.1
1,690,709	-		ABIE40_RS08760	0.37	-1.7
1,690,709	-		ABIE40_RS08760	0.37	-1.9
1,690,709	-		ABIE40_RS08760	0.37	-0.5
1,690,709	-		ABIE40_RS08760	0.37	+0.1
1,690,709	-		ABIE40_RS08760	0.37	+0.7
1,690,709	-		ABIE40_RS08760	0.37	-0.5
1,690,709	-		ABIE40_RS08760	0.37	+2.3
1,690,711	+		ABIE40_RS08760	0.37	+0.1
1,690,712	-		ABIE40_RS08760	0.37	-0.0
1,690,712	-		ABIE40_RS08760	0.37	-0.5
1,690,712	-		ABIE40_RS08760	0.37	-2.4
1,690,723	+		ABIE40_RS08760	0.37	-2.5
1,690,723	+		ABIE40_RS08760	0.37	-1.9
1,690,723	+		ABIE40_RS08760	0.37	-0.1
1,690,723	+		ABIE40_RS08760	0.37	-0.3
1,690,723	+		ABIE40_RS08760	0.37	-2.0
1,690,724	-		ABIE40_RS08760	0.38	+1.7
1,690,724	-		ABIE40_RS08760	0.38	+1.6
1,690,724	-		ABIE40_RS08760	0.38	+1.0
1,690,975	+		ABIE40_RS08760	0.53	+0.5
1,690,976	-		ABIE40_RS08760	0.53	-0.9
1,690,976	-		ABIE40_RS08760	0.53	-0.5
1,690,976	-		ABIE40_RS08760	0.53	-1.3
1,690,990	+		ABIE40_RS08760	0.54	-1.3
1,690,991	-		ABIE40_RS08760	0.54	+0.9
1,690,991	-		ABIE40_RS08760	0.54	-0.5
1,690,992	+		ABIE40_RS08760	0.54	-0.3
1,690,992	+		ABIE40_RS08760	0.54	+1.3
1,690,992	+		ABIE40_RS08760	0.54	-0.7
1,690,992	+		ABIE40_RS08760	0.54	+0.3
1,690,993	-		ABIE40_RS08760	0.54	-2.9
1,690,993	-		ABIE40_RS08760	0.54	+0.1
1,690,993	-		ABIE40_RS08760	0.54	+0.3
1,690,993	-		ABIE40_RS08760	0.54	+0.7
1,690,993	-		ABIE40_RS08760	0.54	-0.0
1,690,993	-		ABIE40_RS08760	0.54	+0.2
1,690,993	-		ABIE40_RS08760	0.54	-1.1
1,690,996	+		ABIE40_RS08760	0.54	+0.2
1,690,996	+		ABIE40_RS08760	0.54	-0.2
1,690,997	-		ABIE40_RS08760	0.54	-0.1
1,690,997	-		ABIE40_RS08760	0.54	-1.4
1,690,997	-		ABIE40_RS08760	0.54	+0.1
1,691,086	+		ABIE40_RS08760	0.59	-0.1
1,691,087	-		ABIE40_RS08760	0.60	+0.2
1,691,087	-		ABIE40_RS08760	0.60	+0.8
1,691,087	-		ABIE40_RS08760	0.60	+1.0
1,691,110	+		ABIE40_RS08760	0.61	+0.8
1,691,110	+		ABIE40_RS08760	0.61	-0.3
1,691,110	+		ABIE40_RS08760	0.61	-2.0
1,691,111	-		ABIE40_RS08760	0.61	+0.8
1,691,111	-		ABIE40_RS08760	0.61	+0.1
1,691,111	-		ABIE40_RS08760	0.61	-1.3
1,691,111	-		ABIE40_RS08760	0.61	-1.0
1,691,116	+		ABIE40_RS08760	0.61	-1.0
1,691,116	+		ABIE40_RS08760	0.61	-0.7
1,691,116	+		ABIE40_RS08760	0.61	-0.6
1,691,116	+		ABIE40_RS08760	0.61	-2.6
1,691,116	+		ABIE40_RS08760	0.61	-0.2
1,691,116	+		ABIE40_RS08760	0.61	+1.6
1,691,117	-		ABIE40_RS08760	0.61	+0.7
1,691,117	-		ABIE40_RS08760	0.61	+1.3
1,691,117	-		ABIE40_RS08760	0.61	+0.4
1,691,117	-		ABIE40_RS08760	0.61	+0.2
1,691,117	-		ABIE40_RS08760	0.61	+0.4
1,691,117	-		ABIE40_RS08760	0.61	+0.5
1,691,117	-		ABIE40_RS08760	0.61	+0.1
1,691,117	-		ABIE40_RS08760	0.61	+0.2
1,691,117	-		ABIE40_RS08760	0.61	+0.5
1,691,117	-		ABIE40_RS08760	0.61	-2.2
1,691,232	-		ABIE40_RS08760	0.68	+0.1
1,691,232	-		ABIE40_RS08760	0.68	+0.4
1,691,263	+		ABIE40_RS08760	0.70	+0.8
1,691,263	+		ABIE40_RS08760	0.70	+0.8
1,691,263	+		ABIE40_RS08760	0.70	-0.3
1,691,264	-		ABIE40_RS08760	0.70	-0.3
1,691,264	-		ABIE40_RS08760	0.70	-0.8
1,691,264	-		ABIE40_RS08760	0.70	-0.8
1,691,264	-		ABIE40_RS08760	0.70	-0.2
1,691,266	+		ABIE40_RS08760	0.70	-2.2
1,691,266	+		ABIE40_RS08760	0.70	+0.1
1,691,266	+		ABIE40_RS08760	0.70	+0.6
1,691,266	+		ABIE40_RS08760	0.70	+0.9
1,691,266	+		ABIE40_RS08760	0.70	+0.7
1,691,267	-		ABIE40_RS08760	0.70	-2.4
1,691,267	-		ABIE40_RS08760	0.70	-0.6
1,691,267	-		ABIE40_RS08760	0.70	+1.0
1,691,267	-		ABIE40_RS08760	0.70	+1.0
1,691,452	+		ABIE40_RS08760	0.82	+0.8
1,691,452	+		ABIE40_RS08760	0.82	-0.7
1,691,453	-		ABIE40_RS08760	0.82	+0.0
1,691,453	-		ABIE40_RS08760	0.82	+0.2
1,691,453	-		ABIE40_RS08760	0.82	+0.8
1,691,453	-		ABIE40_RS08760	0.82	+0.7
1,691,494	+		ABIE40_RS08760	0.84	-1.0
1,691,494	+		ABIE40_RS08760	0.84	-0.9
1,691,494	+		ABIE40_RS08760	0.84	+1.1
1,691,494	+		ABIE40_RS08760	0.84	-2.0
1,691,494	+		ABIE40_RS08760	0.84	-0.2
1,691,494	+		ABIE40_RS08760	0.84	-0.2
1,691,494	+		ABIE40_RS08760	0.84	+0.7
1,691,494	+		ABIE40_RS08760	0.84	-1.0
1,691,495	-		ABIE40_RS08760	0.84	-0.1
1,691,495	-		ABIE40_RS08760	0.84	-1.5
1,691,495	-		ABIE40_RS08760	0.84	-0.1
1,691,495	-		ABIE40_RS08760	0.84	-0.6
1,691,495	-		ABIE40_RS08760	0.84	-0.6
1,691,495	-		ABIE40_RS08760	0.84	+0.1
1,691,495	-		ABIE40_RS08760	0.84	+0.1
1,691,495	-		ABIE40_RS08760	0.84	-0.2
1,691,939	+				-0.7
1,691,939	+				-0.6
1,691,939	+				+1.9
1,691,939	+				+0.5
1,691,939	+				+0.6
1,692,044	+		ABIE40_RS08765	0.39	-0.4
1,692,044	+		ABIE40_RS08765	0.39	+0.2
1,692,044	+		ABIE40_RS08765	0.39	+1.7
1,692,113	+		ABIE40_RS08765	0.62	-2.2
1,692,113	+		ABIE40_RS08765	0.62	-1.9
1,692,137	+		ABIE40_RS08765	0.70	-0.4
1,692,137	+		ABIE40_RS08765	0.70	-0.9
1,692,239	+				-1.0
1,692,239	+				+1.4
1,692,239	+				+1.2
1,692,380	+				-0.6
1,692,380	+				+1.0
1,692,381	-				-0.9
1,692,381	-				+1.5
1,692,381	-				+0.0
1,692,396	+				+0.5
1,692,396	+				-2.0
1,692,396	+				+2.0
1,692,396	+				+1.6
1,692,396	+				+1.8
1,692,397	-				+0.9
1,692,397	-				+1.2
1,692,397	-				+1.6
1,692,397	-				-1.5
1,692,422	+				+0.3
1,692,433	+				+0.7
1,692,433	+				+0.0
1,692,434	-				-0.4
1,692,434	-				-2.5
1,692,434	-				+0.7
1,692,434	-				+0.3
1,692,437	+				-0.3
1,692,437	+				-0.6
1,692,437	+				+0.4
1,692,438	-				-0.5
1,692,438	-				+1.3
1,692,438	-				+0.5
1,692,438	-				-0.9
1,692,438	-				-1.9
1,692,438	-				+0.6
1,692,438	-				+1.3
1,692,474	-				+1.1
1,692,480	+				+2.3
1,692,565	+		ABIE40_RS08775	0.87	+0.3
1,692,565	+		ABIE40_RS08775	0.87	-0.3
1,692,565	+		ABIE40_RS08775	0.87	+0.7
1,692,565	+		ABIE40_RS08775	0.87	+0.5
1,692,566	-		ABIE40_RS08775	0.88	+0.1
1,692,566	-		ABIE40_RS08775	0.88	+0.1
1,692,566	-		ABIE40_RS08775	0.88	+0.8
1,692,566	-		ABIE40_RS08775	0.88	-1.9
1,692,588	+				+0.9
1,692,589	-				+3.3
1,692,641	-				+0.3
1,692,646	+				-0.7
1,692,661	+				+0.7
1,692,662	+				-2.0
1,692,662	+				+3.3
1,692,662	+				+0.5
1,692,662	+				+0.4
1,692,662	+				-2.6
1,692,663	-				-0.3
1,692,663	-				+1.4
1,692,663	-				-0.1
1,692,663	-				+0.0
1,692,665	+				+0.1
1,692,665	+				-0.8
1,692,666	-				-1.3
1,692,666	-				-0.0
1,692,708	+				-0.8
1,692,708	+				+2.9
1,692,708	+				+0.1
1,692,709	-				-2.8