Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_76 and PfGW456L13_77 are separated by 111 nucleotides PfGW456L13_77 and PfGW456L13_78 are separated by 156 nucleotides PfGW456L13_78 and PfGW456L13_79 overlap by 4 nucleotides
PfGW456L13_76 - Outer membrane receptor proteins, mostly Fe transport, at 85,633 to 87,750
_76
PfGW456L13_77 - Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB, at 87,862 to 89,241
_77
PfGW456L13_78 - ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component, at 89,398 to 90,186
_78
PfGW456L13_79 - ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component, at 90,183 to 91,142
_79
Position (kb)
87
88
89
90 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 86.893 kb on + strand, within PfGW456L13_76 at 87.022 kb on + strand, within PfGW456L13_76 at 87.023 kb on - strand, within PfGW456L13_76 at 87.058 kb on + strand, within PfGW456L13_76 at 87.160 kb on + strand, within PfGW456L13_76 at 87.160 kb on + strand, within PfGW456L13_76 at 87.160 kb on + strand, within PfGW456L13_76 at 87.160 kb on + strand, within PfGW456L13_76 at 87.160 kb on + strand, within PfGW456L13_76 at 87.160 kb on + strand, within PfGW456L13_76 at 87.160 kb on + strand, within PfGW456L13_76 at 87.161 kb on - strand, within PfGW456L13_76 at 87.196 kb on + strand, within PfGW456L13_76 at 87.197 kb on - strand, within PfGW456L13_76 at 87.197 kb on - strand, within PfGW456L13_76 at 87.197 kb on - strand, within PfGW456L13_76 at 87.217 kb on + strand, within PfGW456L13_76 at 87.217 kb on + strand, within PfGW456L13_76 at 87.218 kb on - strand, within PfGW456L13_76 at 87.218 kb on - strand, within PfGW456L13_76 at 87.218 kb on - strand, within PfGW456L13_76 at 87.218 kb on - strand, within PfGW456L13_76 at 87.218 kb on - strand, within PfGW456L13_76 at 87.233 kb on - strand, within PfGW456L13_76 at 87.233 kb on - strand, within PfGW456L13_76 at 87.253 kb on - strand, within PfGW456L13_76 at 87.313 kb on + strand, within PfGW456L13_76 at 87.314 kb on - strand, within PfGW456L13_76 at 87.314 kb on - strand, within PfGW456L13_76 at 87.355 kb on + strand, within PfGW456L13_76 at 87.355 kb on + strand, within PfGW456L13_76 at 87.355 kb on + strand, within PfGW456L13_76 at 87.356 kb on - strand, within PfGW456L13_76 at 87.356 kb on - strand, within PfGW456L13_76 at 87.433 kb on + strand, within PfGW456L13_76 at 87.434 kb on - strand, within PfGW456L13_76 at 87.687 kb on + strand at 87.832 kb on + strand at 87.833 kb on - strand at 87.886 kb on + strand at 87.887 kb on - strand at 87.913 kb on + strand at 87.914 kb on - strand at 87.970 kb on + strand at 87.970 kb on + strand at 87.971 kb on - strand at 88.003 kb on + strand, within PfGW456L13_77 at 88.003 kb on + strand, within PfGW456L13_77 at 88.003 kb on + strand, within PfGW456L13_77 at 88.003 kb on + strand, within PfGW456L13_77 at 88.003 kb on + strand, within PfGW456L13_77 at 88.003 kb on + strand, within PfGW456L13_77 at 88.004 kb on - strand, within PfGW456L13_77 at 88.004 kb on - strand, within PfGW456L13_77 at 88.082 kb on - strand, within PfGW456L13_77 at 88.082 kb on - strand, within PfGW456L13_77 at 88.105 kb on + strand at 88.190 kb on - strand, within PfGW456L13_77 at 88.409 kb on + strand, within PfGW456L13_77 at 88.409 kb on + strand, within PfGW456L13_77 at 88.514 kb on - strand, within PfGW456L13_77 at 88.514 kb on - strand, within PfGW456L13_77 at 88.514 kb on - strand, within PfGW456L13_77 at 88.727 kb on + strand, within PfGW456L13_77 at 88.728 kb on - strand, within PfGW456L13_77 at 88.728 kb on - strand, within PfGW456L13_77 at 88.728 kb on - strand, within PfGW456L13_77 at 88.728 kb on - strand, within PfGW456L13_77 at 88.765 kb on + strand, within PfGW456L13_77 at 88.861 kb on + strand, within PfGW456L13_77 at 88.861 kb on + strand, within PfGW456L13_77 at 88.862 kb on - strand, within PfGW456L13_77 at 88.886 kb on + strand, within PfGW456L13_77 at 88.886 kb on + strand, within PfGW456L13_77 at 88.886 kb on + strand, within PfGW456L13_77 at 88.887 kb on - strand, within PfGW456L13_77 at 88.982 kb on + strand, within PfGW456L13_77 at 88.983 kb on - strand, within PfGW456L13_77 at 89.274 kb on + strand at 89.274 kb on + strand at 89.274 kb on + strand at 89.275 kb on - strand at 89.335 kb on + strand at 89.336 kb on - strand at 89.336 kb on - strand at 90.034 kb on + strand, within PfGW456L13_78 at 90.034 kb on + strand, within PfGW456L13_78 at 90.035 kb on - strand, within PfGW456L13_78 at 90.035 kb on - strand, within PfGW456L13_78 at 90.055 kb on - strand, within PfGW456L13_78
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 86,893 + PfGW456L13_76 0.59 +2.1 87,022 + PfGW456L13_76 0.66 -0.7 87,023 - PfGW456L13_76 0.66 +1.3 87,058 + PfGW456L13_76 0.67 +0.7 87,160 + PfGW456L13_76 0.72 -0.1 87,160 + PfGW456L13_76 0.72 +1.4 87,160 + PfGW456L13_76 0.72 -0.6 87,160 + PfGW456L13_76 0.72 -0.4 87,160 + PfGW456L13_76 0.72 +1.2 87,160 + PfGW456L13_76 0.72 -0.1 87,160 + PfGW456L13_76 0.72 -0.5 87,161 - PfGW456L13_76 0.72 -1.8 87,196 + PfGW456L13_76 0.74 +0.6 87,197 - PfGW456L13_76 0.74 -0.8 87,197 - PfGW456L13_76 0.74 +1.3 87,197 - PfGW456L13_76 0.74 -0.1 87,217 + PfGW456L13_76 0.75 -0.5 87,217 + PfGW456L13_76 0.75 -1.5 87,218 - PfGW456L13_76 0.75 -0.6 87,218 - PfGW456L13_76 0.75 +1.1 87,218 - PfGW456L13_76 0.75 -1.0 87,218 - PfGW456L13_76 0.75 +1.0 87,218 - PfGW456L13_76 0.75 +0.4 87,233 - PfGW456L13_76 0.76 +0.9 87,233 - PfGW456L13_76 0.76 +0.5 87,253 - PfGW456L13_76 0.76 +1.0 87,313 + PfGW456L13_76 0.79 -1.4 87,314 - PfGW456L13_76 0.79 -2.0 87,314 - PfGW456L13_76 0.79 -0.1 87,355 + PfGW456L13_76 0.81 -2.3 87,355 + PfGW456L13_76 0.81 +1.8 87,355 + PfGW456L13_76 0.81 +0.0 87,356 - PfGW456L13_76 0.81 +0.6 87,356 - PfGW456L13_76 0.81 -0.7 87,433 + PfGW456L13_76 0.85 -0.5 87,434 - PfGW456L13_76 0.85 -2.6 87,687 + +0.3 87,832 + -0.5 87,833 - -0.1 87,886 + +0.3 87,887 - -2.0 87,913 + -0.8 87,914 - -0.5 87,970 + -1.2 87,970 + +2.5 87,971 - +0.6 88,003 + PfGW456L13_77 0.10 +0.3 88,003 + PfGW456L13_77 0.10 +1.5 88,003 + PfGW456L13_77 0.10 +1.6 88,003 + PfGW456L13_77 0.10 +2.6 88,003 + PfGW456L13_77 0.10 +0.6 88,003 + PfGW456L13_77 0.10 +1.2 88,004 - PfGW456L13_77 0.10 -0.8 88,004 - PfGW456L13_77 0.10 +1.0 88,082 - PfGW456L13_77 0.16 +1.6 88,082 - PfGW456L13_77 0.16 -2.0 88,105 + +2.5 88,190 - PfGW456L13_77 0.24 +1.0 88,409 + PfGW456L13_77 0.40 +0.6 88,409 + PfGW456L13_77 0.40 -0.4 88,514 - PfGW456L13_77 0.47 -3.2 88,514 - PfGW456L13_77 0.47 +1.6 88,514 - PfGW456L13_77 0.47 -0.1 88,727 + PfGW456L13_77 0.63 +0.7 88,728 - PfGW456L13_77 0.63 -1.2 88,728 - PfGW456L13_77 0.63 +0.2 88,728 - PfGW456L13_77 0.63 +0.2 88,728 - PfGW456L13_77 0.63 -0.2 88,765 + PfGW456L13_77 0.65 -1.7 88,861 + PfGW456L13_77 0.72 +1.4 88,861 + PfGW456L13_77 0.72 -0.0 88,862 - PfGW456L13_77 0.72 +0.3 88,886 + PfGW456L13_77 0.74 -0.2 88,886 + PfGW456L13_77 0.74 +0.2 88,886 + PfGW456L13_77 0.74 +1.1 88,887 - PfGW456L13_77 0.74 +1.9 88,982 + PfGW456L13_77 0.81 -0.0 88,983 - PfGW456L13_77 0.81 -0.2 89,274 + -1.5 89,274 + -2.8 89,274 + +0.4 89,275 - +0.9 89,335 + -2.6 89,336 - -2.4 89,336 - -1.1 90,034 + PfGW456L13_78 0.81 -1.8 90,034 + PfGW456L13_78 0.81 -0.9 90,035 - PfGW456L13_78 0.81 -0.3 90,035 - PfGW456L13_78 0.81 +0.6 90,055 - PfGW456L13_78 0.83 -0.3
Or see this region's nucleotide sequence