Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4112

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
4,622,849	+		PfGW456L13_4111	0.33	-1.8
4,622,963	-		PfGW456L13_4111	0.45	-1.4
4,622,988	-		PfGW456L13_4111	0.47	-1.8
4,622,988	-		PfGW456L13_4111	0.47	+0.9
4,622,988	-		PfGW456L13_4111	0.47	-2.5
4,623,006	+		PfGW456L13_4111	0.49	-0.7
4,623,007	-		PfGW456L13_4111	0.49	+1.4
4,623,047	+		PfGW456L13_4111	0.53	-1.3
4,623,048	-		PfGW456L13_4111	0.53	+0.8
4,623,075	+		PfGW456L13_4111	0.56	+2.2
4,623,076	-		PfGW456L13_4111	0.56	-0.5
4,623,076	-		PfGW456L13_4111	0.56	+0.3
4,623,076	-		PfGW456L13_4111	0.56	-0.4
4,623,076	-		PfGW456L13_4111	0.56	-0.1
4,623,158	+		PfGW456L13_4111	0.64	-2.0
4,623,159	-		PfGW456L13_4111	0.64	+3.0
4,623,168	-		PfGW456L13_4111	0.65	-0.5
4,623,266	+		PfGW456L13_4111	0.75	+0.4
4,623,267	-		PfGW456L13_4111	0.75	-0.1
4,623,267	-		PfGW456L13_4111	0.75	-1.3
4,623,434	+				+0.7
4,623,490	+				-1.6
4,623,490	+				-0.8
4,623,490	+				-3.1
4,623,490	+				-0.7
4,623,491	-				+0.6
4,623,491	-				-1.0
4,623,511	-				-0.5
4,623,568	+				-0.2
4,623,569	-				-2.2
4,623,569	-				+0.7
4,623,569	-				-0.5
4,623,584	+				-0.5
4,623,626	+				-0.1
4,623,626	+				-0.0
4,623,700	-				-1.4
4,623,754	-				-3.7
4,623,754	-				-1.7
4,623,846	-				-1.2
4,623,853	+				+1.1
4,623,853	+				-1.1
4,623,853	+				-0.4
4,623,854	-				-1.2
4,623,915	-				+0.4
4,624,146	-		PfGW456L13_4112	0.18	+1.2
4,624,146	-		PfGW456L13_4112	0.18	+2.1
4,624,255	+		PfGW456L13_4112	0.23	+2.5
4,624,256	-		PfGW456L13_4112	0.23	+1.2
4,624,256	-		PfGW456L13_4112	0.23	+2.5
4,624,306	+		PfGW456L13_4112	0.25	+1.1
4,624,307	-		PfGW456L13_4112	0.25	-1.8
4,624,307	-		PfGW456L13_4112	0.25	+0.6
4,624,307	-		PfGW456L13_4112	0.25	-0.8
4,624,308	+		PfGW456L13_4112	0.25	+0.3
4,624,308	+		PfGW456L13_4112	0.25	-1.4
4,624,308	+		PfGW456L13_4112	0.25	-0.7
4,624,308	+		PfGW456L13_4112	0.25	-1.5
4,624,309	-		PfGW456L13_4112	0.25	-0.6
4,624,309	-		PfGW456L13_4112	0.25	+0.9
4,624,309	-		PfGW456L13_4112	0.25	-1.1
4,624,309	-		PfGW456L13_4112	0.25	-0.8
4,624,309	-		PfGW456L13_4112	0.25	+0.3
4,624,309	-		PfGW456L13_4112	0.25	-1.5
4,624,333	+		PfGW456L13_4112	0.26	-1.4
4,624,333	+		PfGW456L13_4112	0.26	+0.8
4,624,429	+		PfGW456L13_4112	0.30	-2.6
4,624,430	-		PfGW456L13_4112	0.30	+1.4
4,624,505	-		PfGW456L13_4112	0.34	+0.1
4,624,505	-		PfGW456L13_4112	0.34	-0.2
4,624,788	+		PfGW456L13_4112	0.45	+2.5
4,624,788	+		PfGW456L13_4112	0.45	-0.1
4,624,789	-		PfGW456L13_4112	0.45	-1.4
4,624,789	-		PfGW456L13_4112	0.45	+0.2
4,624,789	-		PfGW456L13_4112	0.45	-1.7
4,624,789	-		PfGW456L13_4112	0.45	+2.3
4,624,791	+		PfGW456L13_4112	0.46	+2.1
4,624,802	+		PfGW456L13_4112	0.46	-2.3
4,624,838	+		PfGW456L13_4112	0.48	+0.1
4,624,838	+		PfGW456L13_4112	0.48	-1.7
4,624,920	+		PfGW456L13_4112	0.51	+1.3
4,624,920	+		PfGW456L13_4112	0.51	-0.6
4,625,044	+		PfGW456L13_4112	0.56	-2.5
4,625,044	+		PfGW456L13_4112	0.56	+0.4
4,625,044	+		PfGW456L13_4112	0.56	-0.2
4,625,107	+		PfGW456L13_4112	0.59	-1.2
4,625,107	+		PfGW456L13_4112	0.59	+1.1
4,625,107	+		PfGW456L13_4112	0.59	+0.2
4,625,107	+		PfGW456L13_4112	0.59	+0.1
4,625,108	-		PfGW456L13_4112	0.59	-0.3
4,625,108	-		PfGW456L13_4112	0.59	+0.5
4,625,108	-		PfGW456L13_4112	0.59	-0.1
4,625,108	-		PfGW456L13_4112	0.59	-1.5
4,625,108	-		PfGW456L13_4112	0.59	+1.0
4,625,108	-		PfGW456L13_4112	0.59	+0.9
4,625,108	-		PfGW456L13_4112	0.59	-0.5
4,625,108	-		PfGW456L13_4112	0.59	+1.4
4,625,108	-		PfGW456L13_4112	0.59	+1.8
4,625,108	-		PfGW456L13_4112	0.59	-1.8
4,625,108	-		PfGW456L13_4112	0.59	+1.2
4,625,161	+		PfGW456L13_4112	0.61	-0.2
4,625,162	-		PfGW456L13_4112	0.61	-0.4
4,625,293	+		PfGW456L13_4112	0.67	+2.4
4,625,294	-		PfGW456L13_4112	0.67	+0.3
4,625,294	-		PfGW456L13_4112	0.67	+2.0
4,625,294	-		PfGW456L13_4112	0.67	-1.5
4,625,294	-		PfGW456L13_4112	0.67	+0.5
4,625,374	+		PfGW456L13_4112	0.70	+0.3
4,625,375	-		PfGW456L13_4112	0.70	+1.5
4,625,403	+		PfGW456L13_4112	0.71	-1.1
4,625,404	-		PfGW456L13_4112	0.71	+1.0
4,625,404	-		PfGW456L13_4112	0.71	-1.0
4,625,404	-		PfGW456L13_4112	0.71	-1.6
4,625,426	-		PfGW456L13_4112	0.72	+1.4
4,625,576	-		PfGW456L13_4112	0.79	+2.8
4,625,932	+				+0.9
4,625,971	-				-2.5
4,626,056	+				-2.5
4,626,056	+				-0.5
4,626,057	-				-1.7
4,626,069	+				+1.3
4,626,070	-				-1.8
4,626,070	-				-0.6
4,626,070	-				-0.2
4,626,070	-				-2.0
4,626,070	-				+0.8
4,626,070	-				-1.6
4,626,070	-				-2.1
4,626,073	+				-0.2
4,626,073	+				-2.2
4,626,073	+				-0.5
4,626,073	+				-2.9
4,626,073	+				-2.1
4,626,073	+				-0.2
4,626,073	+				+0.9
4,626,074	-				+0.2
4,626,074	-				-0.0
4,626,074	-				-0.2
4,626,074	-				-0.4
4,626,074	-				+0.8
4,626,074	-				-1.7
4,626,078	+				+0.4
4,626,078	+				-0.4
4,626,078	+				-0.1
4,626,078	+				+0.7
4,626,078	+				+1.0
4,626,079	-				+1.6
4,626,079	-				+0.9
4,626,079	-				-2.1
4,626,099	-				+1.0
4,626,132	+				+0.9
4,626,132	+				-1.2
4,626,132	+				+0.3
4,626,132	+				-2.5
4,626,133	-				-1.4
4,626,133	-				+0.2
4,626,133	-				+0.4
4,626,133	-				+0.8
4,626,133	-				-0.5
4,626,133	-				+0.0
4,626,151	+				+0.4
4,626,151	+				+0.1
4,626,152	-				+0.4
4,626,152	-				+0.1
4,626,152	-				-0.0
4,626,152	-				-0.0
4,626,154	-				-2.5
4,626,154	-				+1.0
4,626,154	-				+0.7
4,626,154	-				+1.7
4,626,154	-				+0.7
4,626,154	-				+1.1
4,626,173	+				-0.7
4,626,173	+				+1.8
4,626,174	-				+0.2
4,626,214	+				-0.4
4,626,219	+				+0.2
4,626,236	+				+0.1
4,626,236	+				-0.5
4,626,236	+				-0.9
4,626,237	-				-0.5
4,626,237	-				+0.1
4,626,237	-				-2.0
4,626,237	-				-0.1
4,626,241	+				+0.5
4,626,278	+				-0.8
4,626,279	-				-0.9
4,626,347	+		PfGW456L13_4113	0.11	+0.9
4,626,347	+		PfGW456L13_4113	0.11	+0.8
4,626,347	+		PfGW456L13_4113	0.11	-0.7
4,626,348	-		PfGW456L13_4113	0.11	-0.5
4,626,373	-		PfGW456L13_4113	0.14	-0.4
4,626,373	-		PfGW456L13_4113	0.14	-1.0
4,626,373	-		PfGW456L13_4113	0.14	+0.3
4,626,406	+		PfGW456L13_4113	0.18	-1.1
4,626,406	+		PfGW456L13_4113	0.18	+0.5
4,626,406	+		PfGW456L13_4113	0.18	-0.2
4,626,406	+				+1.7
4,626,406	+		PfGW456L13_4113	0.18	-0.2
4,626,406	+		PfGW456L13_4113	0.18	-1.1
4,626,406	+		PfGW456L13_4113	0.18	+0.7
4,626,407	-		PfGW456L13_4113	0.18	-2.5
4,626,407	-		PfGW456L13_4113	0.18	+0.1
4,626,576	+		PfGW456L13_4113	0.39	-1.1
4,626,576	+		PfGW456L13_4113	0.39	-1.8
4,626,576	+		PfGW456L13_4113	0.39	+0.8
4,626,577	-		PfGW456L13_4113	0.39	-0.9
4,626,578	+		PfGW456L13_4113	0.39	+1.8
4,626,618	+		PfGW456L13_4113	0.44	-2.0
4,626,618	+		PfGW456L13_4113	0.44	-2.9
4,626,618	+		PfGW456L13_4113	0.44	+1.2
4,626,618	+		PfGW456L13_4113	0.44	-0.4
4,626,618	+		PfGW456L13_4113	0.44	-2.1
4,626,618	+		PfGW456L13_4113	0.44	-1.8
4,626,619	-		PfGW456L13_4113	0.44	-1.7
4,626,619	-		PfGW456L13_4113	0.44	-0.2
4,626,619	-		PfGW456L13_4113	0.44	-0.2
4,626,619	-		PfGW456L13_4113	0.44	-0.5
4,626,619	-		PfGW456L13_4113	0.44	-0.2
4,626,619	-		PfGW456L13_4113	0.44	-2.0
4,626,681	+		PfGW456L13_4113	0.52	-0.5
4,626,681	+		PfGW456L13_4113	0.52	-1.2
4,626,684	+		PfGW456L13_4113	0.52	+0.1
4,626,684	+		PfGW456L13_4113	0.52	+1.1
4,626,703	+		PfGW456L13_4113	0.54	-0.5
4,626,706	+		PfGW456L13_4113	0.55	+0.3
4,626,706	+		PfGW456L13_4113	0.55	-0.5
4,626,706	+		PfGW456L13_4113	0.55	+0.2
4,626,706	+		PfGW456L13_4113	0.55	-0.8
4,626,707	-		PfGW456L13_4113	0.55	-0.1
4,626,728	+		PfGW456L13_4113	0.57	-0.5
4,626,747	+		PfGW456L13_4113	0.60	-2.5
4,626,747	+		PfGW456L13_4113	0.60	-0.3
4,626,747	+		PfGW456L13_4113	0.60	-2.5
4,626,748	-		PfGW456L13_4113	0.60	-2.5
4,626,748	-		PfGW456L13_4113	0.60	-1.4
4,626,783	+		PfGW456L13_4113	0.64	+0.1
4,626,784	-		PfGW456L13_4113	0.64	+0.4
4,626,930	+		PfGW456L13_4113	0.82	-1.9
4,627,018	+				+0.9
4,627,019	-				-0.4
4,627,075	-				-0.7
4,627,075	-				+1.4