Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1894

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
2,086,679	+		PfGW456L13_1893	0.36	-1.3
2,086,680	-		PfGW456L13_1893	0.36	-0.1
2,086,680	-		PfGW456L13_1893	0.36	+1.3
2,086,680	-		PfGW456L13_1893	0.36	+0.4
2,086,857	+		PfGW456L13_1893	0.50	-0.1
2,086,934	+		PfGW456L13_1893	0.56	-0.7
2,086,935	-		PfGW456L13_1893	0.56	+1.0
2,086,970	+		PfGW456L13_1893	0.59	-1.3
2,087,144	+		PfGW456L13_1893	0.73	+1.0
2,087,144	+		PfGW456L13_1893	0.73	+0.2
2,087,144	+		PfGW456L13_1893	0.73	+0.9
2,087,145	-		PfGW456L13_1893	0.73	-0.2
2,087,145	-		PfGW456L13_1893	0.73	+0.9
2,087,145	-		PfGW456L13_1893	0.73	+0.8
2,087,145	-		PfGW456L13_1893	0.73	+1.1
2,087,145	-		PfGW456L13_1893	0.73	+0.2
2,087,255	+		PfGW456L13_1893	0.82	+0.8
2,087,255	+		PfGW456L13_1893	0.82	-0.7
2,087,256	-		PfGW456L13_1893	0.82	+0.6
2,087,256	-		PfGW456L13_1893	0.82	+0.7
2,087,256	-		PfGW456L13_1893	0.82	-0.5
2,087,256	-		PfGW456L13_1893	0.82	-0.3
2,087,256	-		PfGW456L13_1893	0.82	+0.2
2,087,391	-				-2.0
2,087,479	+				-0.8
2,087,479	+				+0.5
2,087,479	+				-1.1
2,087,479	+				-1.7
2,087,479	+				+0.9
2,087,479	+				-0.1
2,087,480	-				-1.6
2,087,480	-				-1.1
2,087,480	-				-0.5
2,087,480	-				-2.8
2,087,480	-				+1.5
2,087,480	-				+0.1
2,087,480	-				+0.2
2,087,480	-				+0.8
2,087,483	+				+0.2
2,087,484	-				-1.8
2,087,484	-				-1.3
2,087,541	+				-2.8
2,087,541	+				-0.8
2,087,549	+				+1.6
2,087,550	-				+0.4
2,087,579	+				+0.3
2,087,579	+				+1.3
2,087,579	+				-1.4
2,087,579	+				-1.9
2,087,579	+				+0.7
2,087,579	+				-0.7
2,087,580	-				-0.7
2,087,580	-				-0.9
2,087,600	+				-2.0
2,087,600	+				-2.1
2,087,600	+				-2.5
2,087,600	+				-1.3
2,087,601	-				-1.3
2,087,601	-				-0.5
2,087,601	-				-2.7
2,087,601	-				-1.8
2,087,779	+		PfGW456L13_1894	0.14	-2.3
2,087,779	+		PfGW456L13_1894	0.14	-1.8
2,087,832	+		PfGW456L13_1894	0.18	-1.8
2,087,833	-		PfGW456L13_1894	0.18	-0.4
2,088,005	+		PfGW456L13_1894	0.31	-1.3
2,088,005	+		PfGW456L13_1894	0.31	-1.9
2,088,005	+		PfGW456L13_1894	0.31	-2.0
2,088,005	+		PfGW456L13_1894	0.31	-1.9
2,088,005	+		PfGW456L13_1894	0.31	-2.2
2,088,005	+		PfGW456L13_1894	0.31	+0.0
2,088,005	+		PfGW456L13_1894	0.31	+0.1
2,088,006	-		PfGW456L13_1894	0.31	+0.8
2,088,006	-		PfGW456L13_1894	0.31	-1.7
2,088,006	-		PfGW456L13_1894	0.31	-1.1
2,088,017	+		PfGW456L13_1894	0.32	-1.7
2,088,018	-		PfGW456L13_1894	0.32	-0.5
2,088,018	-		PfGW456L13_1894	0.32	+0.7
2,088,125	+		PfGW456L13_1894	0.40	+0.2
2,088,245	+		PfGW456L13_1894	0.49	+1.3
2,088,335	+		PfGW456L13_1894	0.56	+3.3
2,088,335	+		PfGW456L13_1894	0.56	-3.0
2,088,335	+		PfGW456L13_1894	0.56	-3.0
2,088,335	+		PfGW456L13_1894	0.56	-2.0
2,088,335	+		PfGW456L13_1894	0.56	-0.0
2,088,473	+		PfGW456L13_1894	0.67	-0.4
2,088,473	+		PfGW456L13_1894	0.67	-1.4
2,088,474	-		PfGW456L13_1894	0.67	-0.6
2,088,483	+		PfGW456L13_1894	0.68	-2.5
2,088,515	+		PfGW456L13_1894	0.70	-3.0
2,088,515	+		PfGW456L13_1894	0.70	-1.0
2,088,516	-		PfGW456L13_1894	0.70	-0.1
2,088,906	+				+0.2
2,088,907	-				-0.7
2,088,907	-				-0.5
2,088,986	-				-0.3
2,089,052	+				-0.8
2,089,052	+				-1.7
2,089,053	-				-0.5
2,089,053	-				-2.3
2,089,173	-				-2.2
2,089,210	+		PfGW456L13_1895	0.12	-1.8
2,089,210	+		PfGW456L13_1895	0.12	-1.8
2,089,211	-		PfGW456L13_1895	0.12	-1.0
2,089,211	-		PfGW456L13_1895	0.12	+0.3
2,089,211	-		PfGW456L13_1895	0.12	-1.8
2,089,211	-		PfGW456L13_1895	0.12	-1.6
2,089,216	+		PfGW456L13_1895	0.13	-2.2
2,089,216	+		PfGW456L13_1895	0.13	-0.7
2,089,217	-		PfGW456L13_1895	0.13	-1.0
2,089,217	-		PfGW456L13_1895	0.13	-1.9
2,089,235	+		PfGW456L13_1895	0.15	-0.6
2,089,235	+		PfGW456L13_1895	0.15	-0.9
2,089,235	+		PfGW456L13_1895	0.15	+0.1
2,089,235	+		PfGW456L13_1895	0.15	-2.1
2,089,235	+		PfGW456L13_1895	0.15	-0.3
2,089,235	+		PfGW456L13_1895	0.15	-2.5
2,089,236	-		PfGW456L13_1895	0.15	-3.1
2,089,236	-		PfGW456L13_1895	0.15	+0.0
2,089,236	-		PfGW456L13_1895	0.15	-0.9
2,089,270	+		PfGW456L13_1895	0.18	-0.1
2,089,270	+		PfGW456L13_1895	0.18	-0.1
2,089,270	+		PfGW456L13_1895	0.18	-0.7
2,089,271	-		PfGW456L13_1895	0.19	-1.8
2,089,271	-		PfGW456L13_1895	0.19	-3.6
2,089,294	+		PfGW456L13_1895	0.21	-0.1
2,089,294	+		PfGW456L13_1895	0.21	-1.4
2,089,294	+		PfGW456L13_1895	0.21	-2.8
2,089,294	+		PfGW456L13_1895	0.21	-2.5
2,089,294	+		PfGW456L13_1895	0.21	-2.3
2,089,294	+		PfGW456L13_1895	0.21	-0.9
2,089,294	+		PfGW456L13_1895	0.21	-0.1
2,089,294	+		PfGW456L13_1895	0.21	-2.5
2,089,294	+		PfGW456L13_1895	0.21	-1.7
2,089,294	+		PfGW456L13_1895	0.21	-1.8
2,089,294	+		PfGW456L13_1895	0.21	-0.8
2,089,294	+		PfGW456L13_1895	0.21	-1.4
2,089,294	+		PfGW456L13_1895	0.21	-1.6
2,089,294	+		PfGW456L13_1895	0.21	-1.3
2,089,294	+		PfGW456L13_1895	0.21	+0.5
2,089,295	-		PfGW456L13_1895	0.21	-1.1
2,089,295	-		PfGW456L13_1895	0.21	-1.6
2,089,295	-		PfGW456L13_1895	0.21	-2.2
2,089,295	-		PfGW456L13_1895	0.21	-0.3
2,089,295	-		PfGW456L13_1895	0.21	-1.4
2,089,295	-		PfGW456L13_1895	0.21	-2.1
2,089,295	-		PfGW456L13_1895	0.21	-1.3
2,089,295	-		PfGW456L13_1895	0.21	-1.6
2,089,295	-		PfGW456L13_1895	0.21	-1.1
2,089,295	-		PfGW456L13_1895	0.21	+0.7
2,089,450	+		PfGW456L13_1895	0.38	-0.3
2,089,451	-		PfGW456L13_1895	0.38	+0.7
2,089,451	-		PfGW456L13_1895	0.38	-1.4
2,089,451	-		PfGW456L13_1895	0.38	-0.7
2,089,451	-		PfGW456L13_1895	0.38	-1.1
2,089,600	+		PfGW456L13_1895	0.55	-1.5
2,089,600	+		PfGW456L13_1895	0.55	+0.0
2,089,601	-		PfGW456L13_1895	0.55	+0.2
2,089,732	+		PfGW456L13_1895	0.69	-3.9
2,089,732	+		PfGW456L13_1895	0.69	+1.3
2,089,732	+		PfGW456L13_1895	0.69	-1.4
2,089,732	+		PfGW456L13_1895	0.69	-3.4
2,089,733	-		PfGW456L13_1895	0.69	-3.4
2,089,733	-		PfGW456L13_1895	0.69	-1.6
2,089,853	-		PfGW456L13_1895	0.83	-2.4
2,089,882	+		PfGW456L13_1895	0.86	-0.8
2,089,882	+		PfGW456L13_1895	0.86	-1.0
2,089,882	+		PfGW456L13_1895	0.86	-1.8
2,089,882	+		PfGW456L13_1895	0.86	-2.0
2,089,883	-		PfGW456L13_1895	0.86	+1.7
2,089,883	-				-0.3
2,089,883	-		PfGW456L13_1895	0.86	-3.6
2,089,883	-		PfGW456L13_1895	0.86	-1.8