Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1553

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
1,713,573	+		PfGW456L13_1551	0.73	+0.2
1,713,573	+		PfGW456L13_1551	0.73	-1.3
1,713,592	+		PfGW456L13_1551	0.77	-1.9
1,713,592	+		PfGW456L13_1551	0.77	-1.2
1,713,593	-		PfGW456L13_1551	0.77	+1.0
1,713,593	-		PfGW456L13_1551	0.77	-0.8
1,713,593	-		PfGW456L13_1551	0.77	-0.3
1,713,593	-		PfGW456L13_1551	0.77	-1.9
1,713,593	-		PfGW456L13_1551	0.77	-1.7
1,713,634	+		PfGW456L13_1551	0.86	+0.8
1,713,634	+		PfGW456L13_1551	0.86	+1.2
1,713,635	-		PfGW456L13_1551	0.86	+0.1
1,713,638	-		PfGW456L13_1551	0.87	+0.1
1,713,745	+				+0.2
1,713,745	+				+1.3
1,713,746	-				+0.1
1,713,749	+				+1.3
1,713,749	+				+1.4
1,713,749	+				+0.4
1,713,749	+				-0.2
1,713,749	+				+0.6
1,713,749	+				-0.4
1,713,749	+				-1.2
1,713,749	+				-0.2
1,713,750	-				-0.4
1,713,750	-				-1.2
1,713,750	-				+0.1
1,713,750	-				+0.1
1,713,913	+		PfGW456L13_1552	0.27	+0.3
1,713,913	+		PfGW456L13_1552	0.27	-2.2
1,713,913	+				+1.4
1,713,988	+		PfGW456L13_1552	0.46	+0.6
1,713,989	-		PfGW456L13_1552	0.46	-0.1
1,714,220	+				+0.3
1,714,220	+				+1.1
1,714,220	+				-0.7
1,714,220	+				+0.2
1,714,220	+				-2.2
1,714,221	-				+0.9
1,714,221	-				-0.5
1,714,221	-				+0.6
1,714,221	-				-2.2
1,714,221	-				-0.1
1,714,225	+				-0.4
1,714,225	+				+0.7
1,714,226	-				+0.2
1,714,226	-				+0.8
1,714,226	-				-0.5
1,714,226	-				-0.4
1,714,226	-				+1.5
1,714,226	-				-0.9
1,714,226	-				-2.9
1,714,232	+				-1.9
1,714,232	+				+0.3
1,714,232	+				+1.7
1,714,232	+				+0.1
1,714,235	+				-0.6
1,714,235	+				+0.1
1,714,235	+				-0.4
1,714,236	-				-0.1
1,714,236	-				+0.0
1,714,388	-				-2.7
1,714,388	-				-0.3
1,714,388	-				-0.3
1,714,403	+				-1.4
1,714,403	+				-3.9
1,714,561	+		PfGW456L13_1553	0.29	+1.1
1,714,561	+		PfGW456L13_1553	0.29	+1.4
1,714,562	-		PfGW456L13_1553	0.29	-3.1
1,714,562	-		PfGW456L13_1553	0.29	-1.9
1,714,562	-		PfGW456L13_1553	0.29	-0.1
1,714,568	+		PfGW456L13_1553	0.30	+0.4
1,714,569	-		PfGW456L13_1553	0.30	-0.8
1,714,569	-		PfGW456L13_1553	0.30	-2.1
1,714,569	-		PfGW456L13_1553	0.30	-0.5
1,714,623	+		PfGW456L13_1553	0.38	-1.4
1,714,636	+		PfGW456L13_1553	0.40	-0.2
1,714,636	+		PfGW456L13_1553	0.40	-0.4
1,714,636	+		PfGW456L13_1553	0.40	-1.2
1,714,636	+		PfGW456L13_1553	0.40	-0.2
1,714,636	+		PfGW456L13_1553	0.40	-0.1
1,714,637	-		PfGW456L13_1553	0.40	-2.4
1,714,637	-		PfGW456L13_1553	0.40	-1.9
1,714,637	-		PfGW456L13_1553	0.40	-0.1
1,714,637	-		PfGW456L13_1553	0.40	-0.2
1,714,637	-		PfGW456L13_1553	0.40	-0.2
1,714,637	-		PfGW456L13_1553	0.40	-0.9
1,714,671	+		PfGW456L13_1553	0.46	-0.6
1,714,671	+		PfGW456L13_1553	0.46	-1.3
1,714,755	+		PfGW456L13_1553	0.59	+1.1
1,714,756	-		PfGW456L13_1553	0.59	-0.4
1,714,756	-		PfGW456L13_1553	0.59	-2.5
1,714,758	+		PfGW456L13_1553	0.59	+0.2
1,714,759	-		PfGW456L13_1553	0.59	+1.2
1,714,759	-		PfGW456L13_1553	0.59	-0.8
1,714,920	+		PfGW456L13_1553	0.84	-1.2
1,714,993	-				-0.5
1,715,019	+				-0.5
1,715,019	+				+1.0
1,715,020	-				+1.6
1,715,022	+				+1.0
1,715,022	+				-2.4
1,715,022	+				-0.5
1,715,023	-				+0.4
1,715,102	-		PfGW456L13_1554	0.14	-1.1
1,715,121	+		PfGW456L13_1554	0.18	+0.2
1,715,121	+		PfGW456L13_1554	0.18	+0.8
1,715,121	+		PfGW456L13_1554	0.18	+0.4
1,715,121	+		PfGW456L13_1554	0.18	+0.8
1,715,122	-		PfGW456L13_1554	0.18	-2.7
1,715,122	-		PfGW456L13_1554	0.18	+1.3
1,715,122	-		PfGW456L13_1554	0.18	-1.9
1,715,122	-		PfGW456L13_1554	0.18	-0.9
1,715,298	+		PfGW456L13_1554	0.52	-1.0
1,715,299	-		PfGW456L13_1554	0.52	+2.4
1,715,299	-		PfGW456L13_1554	0.52	-0.3
1,715,299	-		PfGW456L13_1554	0.52	-0.2
1,715,306	+		PfGW456L13_1554	0.53	+1.2
1,715,306	+		PfGW456L13_1554	0.53	-0.3
1,715,306	+		PfGW456L13_1554	0.53	+2.3
1,715,306	+		PfGW456L13_1554	0.53	-1.0
1,715,306	+		PfGW456L13_1554	0.53	+0.2
1,715,306	+		PfGW456L13_1554	0.53	+0.0
1,715,306	+		PfGW456L13_1554	0.53	-1.1
1,715,306	+		PfGW456L13_1554	0.53	+0.4
1,715,306	+		PfGW456L13_1554	0.53	-0.0
1,715,306	+		PfGW456L13_1554	0.53	+0.2
1,715,306	+		PfGW456L13_1554	0.53	-0.6
1,715,306	+		PfGW456L13_1554	0.53	-0.5
1,715,307	-		PfGW456L13_1554	0.53	-1.0
1,715,307	-		PfGW456L13_1554	0.53	-3.2
1,715,330	-		PfGW456L13_1554	0.58	-0.1
1,715,374	+		PfGW456L13_1554	0.66	-1.1
1,715,411	-		PfGW456L13_1554	0.73	+1.4
1,715,551	+				+2.0
1,715,552	-				-0.6
1,715,552	-				+2.4
1,715,552	-				+0.1
1,715,552	-				-2.1
1,715,644	+				-2.5
1,715,644	+				+0.4
1,715,658	+				-0.4
1,715,659	-				+0.7
1,715,659	-				+1.3
1,715,666	+				-0.6
1,715,666	+				+0.9
1,715,666	+				+0.2
1,715,666	+				+1.0
1,715,667	-				+0.6
1,715,667	-				-0.5
1,715,698	-				-2.6
1,715,823	+		PfGW456L13_1555	0.11	-1.2
1,715,823	+		PfGW456L13_1555	0.11	+0.5
1,715,823	+		PfGW456L13_1555	0.11	+1.3
1,715,824	-		PfGW456L13_1555	0.11	+1.5
1,715,824	-		PfGW456L13_1555	0.11	+0.6
1,715,824	-		PfGW456L13_1555	0.11	+0.5
1,715,824	-		PfGW456L13_1555	0.11	-0.2
1,715,824	-		PfGW456L13_1555	0.11	+0.5
1,715,824	-		PfGW456L13_1555	0.11	-2.1
1,715,824	-		PfGW456L13_1555	0.11	-0.8
1,715,878	+		PfGW456L13_1555	0.16	+0.4
1,716,009	+		PfGW456L13_1555	0.27	+0.0
1,716,009	+		PfGW456L13_1555	0.27	-0.9
1,716,009	+		PfGW456L13_1555	0.27	+1.2
1,716,010	-		PfGW456L13_1555	0.27	+1.1
1,716,010	-		PfGW456L13_1555	0.27	+0.5
1,716,010	-		PfGW456L13_1555	0.27	-0.1
1,716,010	-		PfGW456L13_1555	0.27	+0.9
1,716,010	-		PfGW456L13_1555	0.27	+0.2
1,716,010	-		PfGW456L13_1555	0.27	+0.1
1,716,010	-		PfGW456L13_1555	0.27	+1.1