Strain Fitness in Pseudomonas sp. S08-1 around OH686_16700

Experiment: Sorgoleone (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sorgoleone (C)
3,488,926	+		OH686_16695	0.13	+0.5
3,488,926	+		OH686_16695	0.13	-0.9
3,488,927	-		OH686_16695	0.14	-0.0
3,488,927	-		OH686_16695	0.14	+0.2
3,488,927	-		OH686_16695	0.14	-1.0
3,488,940	-		OH686_16695	0.15	-0.7
3,488,940	-		OH686_16695	0.15	+0.5
3,489,034	+		OH686_16695	0.23	+0.2
3,489,034	+		OH686_16695	0.23	+1.1
3,489,034	+		OH686_16695	0.23	-0.7
3,489,034	+		OH686_16695	0.23	+0.2
3,489,034	+		OH686_16695	0.23	-0.7
3,489,034	+		OH686_16695	0.23	-0.8
3,489,035	-		OH686_16695	0.24	-0.2
3,489,035	-		OH686_16695	0.24	+0.2
3,489,035	-		OH686_16695	0.24	+1.1
3,489,035	-		OH686_16695	0.24	-0.4
3,489,035	-		OH686_16695	0.24	-0.3
3,489,035	-		OH686_16695	0.24	-0.7
3,489,035	-		OH686_16695	0.24	+0.3
3,489,035	-		OH686_16695	0.24	-0.6
3,489,035	-		OH686_16695	0.24	-0.7
3,489,035	-		OH686_16695	0.24	-0.8
3,489,053	+		OH686_16695	0.25	+0.0
3,489,054	-		OH686_16695	0.25	-0.4
3,489,054	-		OH686_16695	0.25	-0.3
3,489,054	-		OH686_16695	0.25	-0.3
3,489,070	+		OH686_16695	0.27	-0.7
3,489,070	+		OH686_16695	0.27	+0.6
3,489,070	+		OH686_16695	0.27	+0.3
3,489,070	+		OH686_16695	0.27	+0.1
3,489,070	+		OH686_16695	0.27	-0.7
3,489,070	+		OH686_16695	0.27	+0.9
3,489,070	+		OH686_16695	0.27	+0.4
3,489,070	+		OH686_16695	0.27	-0.8
3,489,070	+		OH686_16695	0.27	-0.3
3,489,071	-		OH686_16695	0.27	-0.3
3,489,071	-		OH686_16695	0.27	+0.4
3,489,071	-		OH686_16695	0.27	-0.9
3,489,071	-		OH686_16695	0.27	-0.2
3,489,071	-		OH686_16695	0.27	-0.8
3,489,071	-		OH686_16695	0.27	+0.0
3,489,307	+		OH686_16695	0.48	-1.3
3,489,334	+		OH686_16695	0.51	-0.3
3,489,334	+		OH686_16695	0.51	+0.1
3,489,334	+		OH686_16695	0.51	-1.5
3,489,334	+		OH686_16695	0.51	+0.8
3,489,334	+		OH686_16695	0.51	+2.0
3,489,334	+		OH686_16695	0.51	+1.0
3,489,334	+		OH686_16695	0.51	+0.2
3,489,334	+		OH686_16695	0.51	-0.3
3,489,334	+		OH686_16695	0.51	+0.1
3,489,335	-		OH686_16695	0.51	-0.1
3,489,335	-		OH686_16695	0.51	-1.7
3,489,335	-		OH686_16695	0.51	+0.0
3,489,335	-		OH686_16695	0.51	+0.1
3,489,335	-		OH686_16695	0.51	+0.1
3,489,335	-		OH686_16695	0.51	-0.5
3,489,335	-		OH686_16695	0.51	-0.1
3,489,335	-		OH686_16695	0.51	-0.4
3,489,362	-		OH686_16695	0.54	+0.0
3,489,362	-		OH686_16695	0.54	+0.1
3,489,861	+				+1.0
3,489,865	+				-1.1
3,489,865	+				-0.2
3,489,865	+				-0.1
3,489,865	+				-0.7
3,489,865	+				-0.3
3,489,865	+				+0.0
3,489,865	+				-0.9
3,489,865	+				+1.1
3,489,865	+				+0.2
3,489,865	-				-0.7
3,489,866	-				+0.1
3,489,866	-				+0.5
3,489,866	-				-0.5
3,489,866	-				-0.4
3,489,985	+		OH686_16700	0.10	-0.2
3,489,985	+		OH686_16700	0.10	+0.3
3,489,985	+		OH686_16700	0.10	-0.2
3,489,985	+		OH686_16700	0.10	-0.1
3,489,985	+		OH686_16700	0.10	+0.7
3,489,985	+		OH686_16700	0.10	+0.5
3,489,985	+		OH686_16700	0.10	-0.3
3,489,986	-		OH686_16700	0.10	+0.2
3,489,986	-		OH686_16700	0.10	+0.1
3,489,986	-		OH686_16700	0.10	-0.0
3,489,986	-		OH686_16700	0.10	-0.8
3,489,986	-		OH686_16700	0.10	+0.0
3,489,986	-		OH686_16700	0.10	+0.1
3,489,986	-		OH686_16700	0.10	+0.7
3,489,987	+		OH686_16700	0.10	+0.3
3,489,988	-		OH686_16700	0.10	-0.2
3,489,988	-		OH686_16700	0.10	+1.0
3,489,988	-		OH686_16700	0.10	+0.2
3,490,202	+		OH686_16700	0.30	-0.0
3,490,202	+		OH686_16700	0.30	+0.4
3,490,202	+		OH686_16700	0.30	-0.3
3,490,202	+		OH686_16700	0.30	-1.0
3,490,202	+		OH686_16700	0.30	+0.2
3,490,202	+		OH686_16700	0.30	-0.4
3,490,202	+		OH686_16700	0.30	-0.3
3,490,202	+		OH686_16700	0.30	-0.6
3,490,203	-		OH686_16700	0.30	-1.5
3,490,203	-		OH686_16700	0.30	+1.2
3,490,203	-		OH686_16700	0.30	+1.7
3,490,203	-		OH686_16700	0.30	+0.7
3,490,203	-		OH686_16700	0.30	-1.2
3,490,203	-		OH686_16700	0.30	-0.7
3,490,203	-		OH686_16700	0.30	-0.2
3,490,203	-		OH686_16700	0.30	-0.5
3,490,203	-		OH686_16700	0.30	-1.3
3,490,203	-		OH686_16700	0.30	+0.3
3,490,203	-		OH686_16700	0.30	-0.7
3,490,203	-		OH686_16700	0.30	+0.4
3,490,336	+		OH686_16700	0.42	-0.7
3,490,337	-		OH686_16700	0.43	-0.2
3,490,337	-		OH686_16700	0.43	-0.3
3,490,337	-		OH686_16700	0.43	-0.3
3,490,337	-		OH686_16700	0.43	-0.5
3,490,384	+		OH686_16700	0.47	-1.2
3,490,423	+		OH686_16700	0.51	+0.7
3,490,423	+		OH686_16700	0.51	+0.1
3,490,423	+		OH686_16700	0.51	+1.6
3,490,423	+		OH686_16700	0.51	+0.2
3,490,423	+		OH686_16700	0.51	-0.5
3,490,423	+		OH686_16700	0.51	-0.5
3,490,423	+		OH686_16700	0.51	-0.4
3,490,423	+		OH686_16700	0.51	-0.3
3,490,423	+		OH686_16700	0.51	-0.1
3,490,423	+		OH686_16700	0.51	+0.9
3,490,424	-		OH686_16700	0.51	+0.1
3,490,424	-		OH686_16700	0.51	+0.3
3,490,424	-		OH686_16700	0.51	-0.2
3,490,424	-		OH686_16700	0.51	-1.4
3,490,424	-		OH686_16700	0.51	-0.1
3,490,424	-		OH686_16700	0.51	+0.8
3,490,507	+		OH686_16700	0.58	+0.4
3,490,508	-		OH686_16700	0.58	-0.2
3,490,508	-		OH686_16700	0.58	-0.0
3,490,508	-		OH686_16700	0.58	-0.2
3,490,694	-		OH686_16700	0.76	+1.4
3,490,694	-		OH686_16700	0.76	-0.8
3,490,746	+		OH686_16700	0.80	+0.1
3,490,746	+		OH686_16700	0.80	+2.0
3,490,746	+		OH686_16700	0.80	-0.8
3,490,747	-		OH686_16700	0.81	+0.8
3,490,747	-		OH686_16700	0.81	-1.4
3,490,813	+		OH686_16700	0.87	+0.5
3,490,867	+				-1.3
3,490,867	+				-1.4
3,490,867	+				-0.9
3,490,867	+				+0.6
3,490,868	-				+0.1
3,490,868	-				-0.3
3,490,868	-				-1.1
3,490,868	-				+1.5
3,490,868	-				+1.7
3,490,868	-				+0.4
3,490,868	-				+0.7
3,490,868	-				-0.3
3,490,955	-				+0.9
3,490,987	-				+0.4
3,491,179	+		OH686_16705	0.40	+0.4
3,491,179	+		OH686_16705	0.40	-0.6
3,491,179	+		OH686_16705	0.40	+1.5
3,491,180	-		OH686_16705	0.40	+0.2
3,491,496	+				-0.0
3,491,497	-				+0.0
3,491,497	-				+0.6
3,491,497	-				-0.5
3,491,553	+				-0.0
3,491,554	-				+0.5
3,491,554	-				-0.8
3,491,554	-				-0.3
3,491,558	+				+0.5
3,491,585	+				-0.4
3,491,586	-				-0.1
3,491,663	+		OH686_16710	0.11	-1.0
3,491,663	+		OH686_16710	0.11	-0.3
3,491,663	+		OH686_16710	0.11	-1.3
3,491,663	+		OH686_16710	0.11	-0.6
3,491,663	+		OH686_16710	0.11	+2.0
3,491,663	+		OH686_16710	0.11	-0.2
3,491,664	-		OH686_16710	0.11	-0.8
3,491,664	-		OH686_16710	0.11	-1.6
3,491,664	-		OH686_16710	0.11	+0.1
3,491,664	-		OH686_16710	0.11	+0.7
3,491,664	-		OH686_16710	0.11	-0.8
3,491,664	-		OH686_16710	0.11	+0.4
3,491,664	-		OH686_16710	0.11	+0.4
3,491,664	-		OH686_16710	0.11	+0.1
3,491,682	-		OH686_16710	0.13	-0.9
3,491,684	+		OH686_16710	0.14	-0.0
3,491,685	-		OH686_16710	0.14	+0.9
3,491,939	+		OH686_16710	0.48	-0.1
3,491,940	-		OH686_16710	0.48	-0.1
3,491,940	-		OH686_16710	0.48	-0.7
3,491,940	-		OH686_16710	0.48	-0.0