Experiment: Sorgoleone (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_07415 and OH686_07420 are separated by 71 nucleotides OH686_07420 and OH686_07425 overlap by 354 nucleotides OH686_07425 and OH686_07430 overlap by 56 nucleotides OH686_07430 and OH686_07435 are separated by 95 nucleotides
OH686_07415: OH686_07415 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 1,509,098 to 1,509,853
_07415
OH686_07420: OH686_07420 - CDS, at 1,509,925 to 1,510,323
_07420
OH686_07425: OH686_07425 - LysR family transcriptional regulator, regulator for bpeEF and oprC, at 1,509,970 to 1,510,893
_07425
OH686_07430: OH686_07430 - Permease of the drug/metabolite transporter (DMT) superfamily, at 1,510,838 to 1,511,725
_07430
OH686_07435: OH686_07435 - hypothetical protein, at 1,511,821 to 1,512,708
_07435
Position (kb)
1510
1511
1512 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1509.860 kb on + strand at 1509.860 kb on + strand at 1509.860 kb on + strand at 1509.860 kb on + strand at 1509.860 kb on + strand at 1509.860 kb on + strand at 1509.860 kb on + strand at 1509.861 kb on - strand at 1509.861 kb on - strand at 1509.861 kb on - strand at 1509.910 kb on - strand at 1509.936 kb on + strand at 1509.937 kb on - strand at 1509.945 kb on + strand at 1510.165 kb on + strand at 1510.165 kb on + strand at 1510.165 kb on + strand at 1510.165 kb on + strand at 1510.481 kb on - strand, within OH686_07425 at 1510.481 kb on - strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.484 kb on + strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.485 kb on - strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.543 kb on + strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.544 kb on - strand, within OH686_07425 at 1510.651 kb on + strand, within OH686_07425 at 1510.651 kb on + strand, within OH686_07425 at 1510.651 kb on + strand, within OH686_07425 at 1510.652 kb on - strand, within OH686_07425 at 1510.652 kb on - strand, within OH686_07425 at 1510.652 kb on - strand, within OH686_07425 at 1510.652 kb on - strand, within OH686_07425 at 1510.652 kb on - strand, within OH686_07425 at 1510.652 kb on - strand, within OH686_07425 at 1510.652 kb on - strand, within OH686_07425 at 1510.677 kb on - strand, within OH686_07425 at 1510.677 kb on - strand, within OH686_07425 at 1510.742 kb on + strand, within OH686_07425 at 1510.742 kb on + strand, within OH686_07425 at 1510.742 kb on + strand, within OH686_07425 at 1510.742 kb on + strand, within OH686_07425 at 1510.743 kb on - strand, within OH686_07425 at 1510.743 kb on - strand, within OH686_07425 at 1510.743 kb on - strand, within OH686_07425 at 1510.753 kb on + strand, within OH686_07425 at 1510.754 kb on - strand, within OH686_07425 at 1510.754 kb on - strand, within OH686_07425 at 1510.754 kb on - strand, within OH686_07425 at 1510.850 kb on + strand at 1510.850 kb on + strand at 1510.858 kb on + strand at 1510.858 kb on + strand at 1510.858 kb on + strand at 1510.858 kb on + strand at 1510.858 kb on + strand at 1510.859 kb on - strand at 1510.859 kb on - strand at 1510.859 kb on - strand at 1511.088 kb on + strand, within OH686_07430 at 1511.088 kb on + strand, within OH686_07430 at 1511.088 kb on + strand, within OH686_07430 at 1511.088 kb on + strand, within OH686_07430 at 1511.088 kb on + strand, within OH686_07430 at 1511.088 kb on + strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.089 kb on - strand, within OH686_07430 at 1511.254 kb on + strand, within OH686_07430 at 1511.255 kb on - strand, within OH686_07430 at 1511.577 kb on - strand, within OH686_07430 at 1511.627 kb on + strand, within OH686_07430 at 1511.627 kb on + strand, within OH686_07430 at 1511.627 kb on + strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.628 kb on - strand, within OH686_07430 at 1511.757 kb on + strand at 1511.784 kb on + strand at 1511.785 kb on - strand at 1511.790 kb on + strand at 1511.790 kb on + strand at 1511.790 kb on + strand at 1511.791 kb on - strand at 1511.791 kb on - strand at 1511.791 kb on - strand at 1511.791 kb on - strand at 1512.011 kb on + strand, within OH686_07435 at 1512.011 kb on + strand, within OH686_07435 at 1512.012 kb on - strand, within OH686_07435 at 1512.012 kb on - strand, within OH686_07435 at 1512.074 kb on + strand, within OH686_07435 at 1512.075 kb on - strand, within OH686_07435 at 1512.075 kb on - strand, within OH686_07435 at 1512.075 kb on - strand, within OH686_07435 at 1512.352 kb on + strand, within OH686_07435 at 1512.352 kb on + strand, within OH686_07435 at 1512.353 kb on - strand, within OH686_07435 at 1512.353 kb on - strand, within OH686_07435 at 1512.368 kb on + strand, within OH686_07435 at 1512.368 kb on + strand, within OH686_07435 at 1512.368 kb on + strand, within OH686_07435 at 1512.369 kb on - strand, within OH686_07435 at 1512.374 kb on + strand, within OH686_07435 at 1512.467 kb on + strand, within OH686_07435 at 1512.468 kb on - strand, within OH686_07435 at 1512.468 kb on - strand, within OH686_07435 at 1512.468 kb on - strand, within OH686_07435 at 1512.468 kb on - strand, within OH686_07435 at 1512.530 kb on + strand, within OH686_07435 at 1512.572 kb on + strand, within OH686_07435 at 1512.572 kb on + strand, within OH686_07435 at 1512.573 kb on - strand, within OH686_07435 at 1512.573 kb on - strand, within OH686_07435 at 1512.573 kb on - strand, within OH686_07435 at 1512.573 kb on - strand, within OH686_07435 at 1512.573 kb on - strand, within OH686_07435 at 1512.610 kb on + strand, within OH686_07435 at 1512.610 kb on + strand, within OH686_07435 at 1512.610 kb on + strand, within OH686_07435 at 1512.610 kb on + strand, within OH686_07435 at 1512.610 kb on + strand, within OH686_07435 at 1512.610 kb on + strand, within OH686_07435 at 1512.610 kb on + strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.611 kb on - strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.614 kb on + strand, within OH686_07435 at 1512.615 kb on - strand, within OH686_07435 at 1512.615 kb on - strand, within OH686_07435 at 1512.615 kb on - strand, within OH686_07435 at 1512.615 kb on - strand, within OH686_07435 at 1512.615 kb on - strand, within OH686_07435 at 1512.615 kb on - strand, within OH686_07435
Per-strain Table
Position Strand Gene LocusTag Fraction Sorgoleone (C) remove 1,509,860 + -0.3 1,509,860 + -2.2 1,509,860 + +0.5 1,509,860 + +0.3 1,509,860 + -0.6 1,509,860 + +1.0 1,509,860 + +0.0 1,509,861 - -0.3 1,509,861 - -0.2 1,509,861 - -0.2 1,509,910 - +0.1 1,509,936 + +0.7 1,509,937 - -0.5 1,509,945 + +0.1 1,510,165 + -0.2 1,510,165 + -0.2 1,510,165 + -0.5 1,510,165 + +1.0 1,510,481 - OH686_07425 0.55 -1.2 1,510,481 - OH686_07425 0.55 -0.7 1,510,484 + OH686_07425 0.56 -0.7 1,510,484 + OH686_07425 0.56 +0.2 1,510,484 + OH686_07425 0.56 +0.2 1,510,484 + OH686_07425 0.56 +0.5 1,510,484 + OH686_07425 0.56 +0.3 1,510,484 + OH686_07425 0.56 -1.0 1,510,484 + OH686_07425 0.56 +0.4 1,510,484 + OH686_07425 0.56 -0.4 1,510,484 + OH686_07425 0.56 -1.4 1,510,484 + OH686_07425 0.56 +0.1 1,510,484 + OH686_07425 0.56 -0.3 1,510,484 + OH686_07425 0.56 +0.2 1,510,484 + OH686_07425 0.56 -1.7 1,510,484 + OH686_07425 0.56 +0.8 1,510,484 + OH686_07425 0.56 -0.7 1,510,484 + OH686_07425 0.56 -1.3 1,510,484 + OH686_07425 0.56 +0.1 1,510,484 + OH686_07425 0.56 -0.3 1,510,484 + OH686_07425 0.56 -0.3 1,510,484 + OH686_07425 0.56 +1.5 1,510,484 + OH686_07425 0.56 +0.1 1,510,484 + OH686_07425 0.56 +1.4 1,510,484 + OH686_07425 0.56 +0.1 1,510,484 + OH686_07425 0.56 +0.3 1,510,484 + OH686_07425 0.56 -0.7 1,510,485 - OH686_07425 0.56 -0.6 1,510,485 - OH686_07425 0.56 +0.2 1,510,485 - OH686_07425 0.56 -0.2 1,510,485 - OH686_07425 0.56 -0.5 1,510,485 - OH686_07425 0.56 -0.6 1,510,485 - OH686_07425 0.56 -0.7 1,510,485 - OH686_07425 0.56 -0.4 1,510,485 - OH686_07425 0.56 +0.1 1,510,485 - OH686_07425 0.56 -0.1 1,510,485 - OH686_07425 0.56 -0.1 1,510,485 - OH686_07425 0.56 -0.9 1,510,485 - OH686_07425 0.56 +0.4 1,510,485 - OH686_07425 0.56 -0.3 1,510,485 - OH686_07425 0.56 +0.6 1,510,485 - OH686_07425 0.56 -0.8 1,510,485 - OH686_07425 0.56 +0.4 1,510,485 - OH686_07425 0.56 -0.7 1,510,485 - OH686_07425 0.56 +0.6 1,510,543 + OH686_07425 0.62 +0.2 1,510,543 + OH686_07425 0.62 +0.6 1,510,543 + OH686_07425 0.62 +0.7 1,510,543 + OH686_07425 0.62 -0.5 1,510,543 + OH686_07425 0.62 -0.7 1,510,543 + OH686_07425 0.62 +0.4 1,510,543 + OH686_07425 0.62 +2.0 1,510,543 + OH686_07425 0.62 -0.1 1,510,543 + OH686_07425 0.62 +1.0 1,510,543 + OH686_07425 0.62 -1.4 1,510,544 - OH686_07425 0.62 +1.0 1,510,544 - OH686_07425 0.62 -0.6 1,510,544 - OH686_07425 0.62 -0.0 1,510,544 - OH686_07425 0.62 +0.1 1,510,544 - OH686_07425 0.62 +1.0 1,510,544 - OH686_07425 0.62 +0.2 1,510,544 - OH686_07425 0.62 -0.5 1,510,544 - OH686_07425 0.62 +0.5 1,510,544 - OH686_07425 0.62 -0.3 1,510,544 - OH686_07425 0.62 -1.9 1,510,544 - OH686_07425 0.62 -2.9 1,510,651 + OH686_07425 0.74 +0.5 1,510,651 + OH686_07425 0.74 +0.2 1,510,651 + OH686_07425 0.74 +0.7 1,510,652 - OH686_07425 0.74 -0.3 1,510,652 - OH686_07425 0.74 -0.0 1,510,652 - OH686_07425 0.74 -0.4 1,510,652 - OH686_07425 0.74 -0.6 1,510,652 - OH686_07425 0.74 +0.5 1,510,652 - OH686_07425 0.74 -0.4 1,510,652 - OH686_07425 0.74 -0.0 1,510,677 - OH686_07425 0.77 +0.3 1,510,677 - OH686_07425 0.77 -0.1 1,510,742 + OH686_07425 0.84 -0.5 1,510,742 + OH686_07425 0.84 +0.7 1,510,742 + OH686_07425 0.84 +0.9 1,510,742 + OH686_07425 0.84 +0.3 1,510,743 - OH686_07425 0.84 +0.4 1,510,743 - OH686_07425 0.84 +0.6 1,510,743 - OH686_07425 0.84 +0.1 1,510,753 + OH686_07425 0.85 -0.0 1,510,754 - OH686_07425 0.85 +0.4 1,510,754 - OH686_07425 0.85 -0.0 1,510,754 - OH686_07425 0.85 +0.0 1,510,850 + -0.0 1,510,850 + -0.2 1,510,858 + +0.5 1,510,858 + -0.3 1,510,858 + +2.0 1,510,858 + -0.3 1,510,858 + -0.0 1,510,859 - -0.2 1,510,859 - -1.7 1,510,859 - +0.0 1,511,088 + OH686_07430 0.28 +1.0 1,511,088 + OH686_07430 0.28 -0.4 1,511,088 + OH686_07430 0.28 +1.2 1,511,088 + OH686_07430 0.28 -0.5 1,511,088 + OH686_07430 0.28 -1.0 1,511,088 + OH686_07430 0.28 -0.4 1,511,089 - OH686_07430 0.28 -0.3 1,511,089 - OH686_07430 0.28 +1.1 1,511,089 - OH686_07430 0.28 -0.3 1,511,089 - OH686_07430 0.28 -0.5 1,511,089 - OH686_07430 0.28 +1.1 1,511,089 - OH686_07430 0.28 +1.7 1,511,089 - OH686_07430 0.28 -0.8 1,511,089 - OH686_07430 0.28 +0.9 1,511,254 + OH686_07430 0.47 +0.3 1,511,255 - OH686_07430 0.47 +0.2 1,511,577 - OH686_07430 0.83 +1.4 1,511,627 + OH686_07430 0.89 -0.4 1,511,627 + OH686_07430 0.89 -0.2 1,511,627 + OH686_07430 0.89 +0.0 1,511,628 - OH686_07430 0.89 +0.7 1,511,628 - OH686_07430 0.89 +0.4 1,511,628 - OH686_07430 0.89 +1.0 1,511,628 - OH686_07430 0.89 -0.0 1,511,628 - OH686_07430 0.89 -0.1 1,511,628 - OH686_07430 0.89 +0.2 1,511,628 - OH686_07430 0.89 +1.5 1,511,628 - OH686_07430 0.89 -0.7 1,511,757 + -0.3 1,511,784 + +0.2 1,511,785 - -0.2 1,511,790 + +0.5 1,511,790 + -0.2 1,511,790 + -0.5 1,511,791 - +0.2 1,511,791 - +0.4 1,511,791 - +0.3 1,511,791 - -0.6 1,512,011 + OH686_07435 0.21 +0.6 1,512,011 + OH686_07435 0.21 +1.5 1,512,012 - OH686_07435 0.22 +0.3 1,512,012 - OH686_07435 0.22 +0.1 1,512,074 + OH686_07435 0.28 -0.2 1,512,075 - OH686_07435 0.29 +0.4 1,512,075 - OH686_07435 0.29 +1.1 1,512,075 - OH686_07435 0.29 -0.3 1,512,352 + OH686_07435 0.60 +1.0 1,512,352 + OH686_07435 0.60 +0.2 1,512,353 - OH686_07435 0.60 -0.8 1,512,353 - OH686_07435 0.60 -0.3 1,512,368 + OH686_07435 0.62 -1.2 1,512,368 + OH686_07435 0.62 -0.8 1,512,368 + OH686_07435 0.62 +0.6 1,512,369 - OH686_07435 0.62 +0.2 1,512,374 + OH686_07435 0.62 -0.4 1,512,467 + OH686_07435 0.73 -0.4 1,512,468 - OH686_07435 0.73 +1.1 1,512,468 - OH686_07435 0.73 +1.1 1,512,468 - OH686_07435 0.73 +1.2 1,512,468 - OH686_07435 0.73 +1.1 1,512,530 + OH686_07435 0.80 -0.1 1,512,572 + OH686_07435 0.85 -2.4 1,512,572 + OH686_07435 0.85 -1.6 1,512,573 - OH686_07435 0.85 +0.6 1,512,573 - OH686_07435 0.85 -0.4 1,512,573 - OH686_07435 0.85 -0.3 1,512,573 - OH686_07435 0.85 -0.4 1,512,573 - OH686_07435 0.85 -0.9 1,512,610 + OH686_07435 0.89 -0.4 1,512,610 + OH686_07435 0.89 -0.0 1,512,610 + OH686_07435 0.89 +0.2 1,512,610 + OH686_07435 0.89 -0.8 1,512,610 + OH686_07435 0.89 -0.8 1,512,610 + OH686_07435 0.89 -1.1 1,512,610 + OH686_07435 0.89 -0.0 1,512,611 - OH686_07435 0.89 -0.5 1,512,611 - OH686_07435 0.89 -1.4 1,512,611 - OH686_07435 0.89 +0.7 1,512,611 - OH686_07435 0.89 +0.1 1,512,611 - OH686_07435 0.89 -0.4 1,512,611 - OH686_07435 0.89 +0.4 1,512,611 - OH686_07435 0.89 +0.6 1,512,611 - OH686_07435 0.89 +0.3 1,512,611 - OH686_07435 0.89 +0.3 1,512,614 + OH686_07435 0.89 +0.1 1,512,614 + OH686_07435 0.89 +0.4 1,512,614 + OH686_07435 0.89 +0.4 1,512,614 + OH686_07435 0.89 -0.8 1,512,614 + OH686_07435 0.89 -0.8 1,512,614 + OH686_07435 0.89 +0.2 1,512,614 + OH686_07435 0.89 -0.0 1,512,614 + OH686_07435 0.89 -0.5 1,512,614 + OH686_07435 0.89 -0.0 1,512,614 + OH686_07435 0.89 +1.2 1,512,614 + OH686_07435 0.89 +0.6 1,512,614 + OH686_07435 0.89 -0.5 1,512,614 + OH686_07435 0.89 +0.4 1,512,614 + OH686_07435 0.89 -0.5 1,512,614 + OH686_07435 0.89 +0.3 1,512,614 + OH686_07435 0.89 +0.0 1,512,614 + OH686_07435 0.89 -1.0 1,512,615 - OH686_07435 0.89 -0.8 1,512,615 - OH686_07435 0.89 -0.7 1,512,615 - OH686_07435 0.89 -0.4 1,512,615 - OH686_07435 0.89 +0.1 1,512,615 - OH686_07435 0.89 -0.4 1,512,615 - OH686_07435 0.89 +0.5
Or see this region's nucleotide sequence