Experiment: Sorgoleone (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04995 and OH686_05000 are separated by 9 nucleotides OH686_05000 and OH686_05005 are separated by 34 nucleotides OH686_05005 and OH686_05010 overlap by 4 nucleotides OH686_05010 and OH686_05015 are separated by 89 nucleotides
OH686_04995: OH686_04995 - DUF326 protein bsYhjQ, at 1,026,193 to 1,026,528
_04995
OH686_05000: OH686_05000 - hypothetical protein, at 1,026,538 to 1,026,858
_05000
OH686_05005: OH686_05005 - hypothetical protein, at 1,026,893 to 1,027,555
_05005
OH686_05010: OH686_05010 - NLP/P60 family protein, at 1,027,552 to 1,028,067
_05010
OH686_05015: OH686_05015 - NLP/P60 family protein, at 1,028,157 to 1,028,768
_05015
Position (kb) 1026
1027
1028 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1025.976 kb on + strand at 1025.976 kb on + strand at 1025.976 kb on + strand at 1025.976 kb on + strand at 1025.976 kb on + strand at 1025.976 kb on + strand at 1025.976 kb on + strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.977 kb on - strand at 1025.984 kb on + strand at 1025.984 kb on + strand at 1025.984 kb on + strand at 1025.984 kb on + strand at 1025.984 kb on + strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1025.985 kb on - strand at 1026.015 kb on + strand at 1026.089 kb on - strand at 1026.089 kb on - strand at 1026.198 kb on + strand at 1026.198 kb on + strand at 1026.199 kb on - strand at 1026.199 kb on - strand at 1026.208 kb on + strand at 1026.309 kb on + strand, within OH686_04995 at 1026.309 kb on + strand, within OH686_04995 at 1026.309 kb on + strand, within OH686_04995 at 1026.310 kb on - strand, within OH686_04995 at 1026.310 kb on - strand, within OH686_04995 at 1026.310 kb on - strand, within OH686_04995 at 1026.632 kb on + strand, within OH686_05000 at 1026.632 kb on + strand, within OH686_05000 at 1026.632 kb on + strand, within OH686_05000 at 1026.632 kb on + strand, within OH686_05000 at 1026.632 kb on + strand, within OH686_05000 at 1026.632 kb on + strand, within OH686_05000 at 1026.632 kb on + strand, within OH686_05000 at 1026.633 kb on - strand, within OH686_05000 at 1026.633 kb on - strand, within OH686_05000 at 1026.633 kb on - strand, within OH686_05000 at 1026.633 kb on - strand, within OH686_05000 at 1026.747 kb on - strand, within OH686_05000 at 1026.747 kb on - strand, within OH686_05000 at 1027.101 kb on + strand, within OH686_05005 at 1027.101 kb on + strand, within OH686_05005 at 1027.101 kb on + strand, within OH686_05005 at 1027.102 kb on - strand, within OH686_05005 at 1027.102 kb on - strand, within OH686_05005 at 1027.102 kb on - strand, within OH686_05005 at 1027.102 kb on - strand, within OH686_05005 at 1027.102 kb on - strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.110 kb on + strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.111 kb on - strand, within OH686_05005 at 1027.172 kb on + strand, within OH686_05005 at 1027.172 kb on + strand, within OH686_05005 at 1027.172 kb on + strand, within OH686_05005 at 1027.172 kb on + strand, within OH686_05005 at 1027.173 kb on - strand, within OH686_05005 at 1027.173 kb on - strand, within OH686_05005 at 1027.239 kb on + strand, within OH686_05005 at 1027.239 kb on + strand, within OH686_05005 at 1027.239 kb on + strand, within OH686_05005 at 1027.239 kb on + strand, within OH686_05005 at 1027.239 kb on + strand, within OH686_05005 at 1027.240 kb on - strand, within OH686_05005 at 1027.240 kb on - strand, within OH686_05005 at 1027.266 kb on + strand, within OH686_05005 at 1027.266 kb on + strand, within OH686_05005 at 1027.266 kb on + strand, within OH686_05005 at 1027.267 kb on - strand, within OH686_05005 at 1027.267 kb on - strand, within OH686_05005 at 1027.267 kb on - strand, within OH686_05005 at 1027.267 kb on - strand, within OH686_05005 at 1027.267 kb on - strand, within OH686_05005 at 1027.312 kb on + strand, within OH686_05005 at 1027.312 kb on + strand, within OH686_05005 at 1027.312 kb on + strand, within OH686_05005 at 1027.313 kb on - strand, within OH686_05005 at 1027.313 kb on - strand, within OH686_05005 at 1027.313 kb on - strand, within OH686_05005 at 1027.313 kb on - strand, within OH686_05005 at 1027.313 kb on - strand, within OH686_05005 at 1027.338 kb on + strand, within OH686_05005 at 1027.512 kb on + strand at 1027.512 kb on + strand at 1027.512 kb on + strand at 1027.518 kb on + strand at 1027.518 kb on + strand at 1027.518 kb on + strand at 1027.519 kb on - strand at 1027.519 kb on - strand at 1027.519 kb on - strand at 1027.604 kb on + strand, within OH686_05010 at 1027.604 kb on + strand, within OH686_05010 at 1027.604 kb on + strand, within OH686_05010 at 1027.604 kb on + strand, within OH686_05010 at 1027.605 kb on - strand, within OH686_05010 at 1027.605 kb on - strand, within OH686_05010 at 1027.605 kb on - strand, within OH686_05010 at 1027.619 kb on + strand, within OH686_05010 at 1027.635 kb on - strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.694 kb on + strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.695 kb on - strand, within OH686_05010 at 1027.844 kb on + strand, within OH686_05010 at 1027.845 kb on - strand, within OH686_05010 at 1027.845 kb on - strand, within OH686_05010 at 1027.850 kb on + strand, within OH686_05010 at 1027.850 kb on + strand, within OH686_05010 at 1027.851 kb on - strand, within OH686_05010 at 1027.902 kb on - strand, within OH686_05010 at 1027.902 kb on - strand, within OH686_05010 at 1028.096 kb on + strand at 1028.096 kb on + strand at 1028.096 kb on + strand at 1028.097 kb on - strand at 1028.230 kb on + strand, within OH686_05015 at 1028.230 kb on + strand, within OH686_05015 at 1028.230 kb on + strand, within OH686_05015 at 1028.230 kb on + strand, within OH686_05015 at 1028.230 kb on + strand, within OH686_05015 at 1028.230 kb on + strand, within OH686_05015 at 1028.231 kb on - strand, within OH686_05015 at 1028.231 kb on - strand, within OH686_05015 at 1028.231 kb on - strand, within OH686_05015 at 1028.231 kb on - strand, within OH686_05015 at 1028.231 kb on - strand, within OH686_05015 at 1028.245 kb on + strand, within OH686_05015 at 1028.245 kb on + strand, within OH686_05015 at 1028.246 kb on - strand, within OH686_05015 at 1028.246 kb on - strand, within OH686_05015 at 1028.246 kb on - strand, within OH686_05015 at 1028.323 kb on + strand, within OH686_05015 at 1028.323 kb on + strand, within OH686_05015 at 1028.323 kb on + strand, within OH686_05015 at 1028.324 kb on - strand, within OH686_05015 at 1028.324 kb on - strand, within OH686_05015 at 1028.324 kb on - strand, within OH686_05015 at 1028.324 kb on - strand, within OH686_05015 at 1028.324 kb on - strand, within OH686_05015 at 1028.324 kb on - strand, within OH686_05015 at 1028.324 kb on - strand, within OH686_05015
Per-strain Table
Position Strand Gene LocusTag Fraction Sorgoleone (C) remove 1,025,976 + -0.2 1,025,976 + -1.8 1,025,976 + +0.6 1,025,976 + -0.0 1,025,976 + -0.1 1,025,976 + -0.3 1,025,976 + +0.2 1,025,977 - -0.1 1,025,977 - +0.4 1,025,977 - +0.3 1,025,977 - -1.2 1,025,977 - -0.8 1,025,977 - -0.0 1,025,977 - +0.2 1,025,977 - +0.2 1,025,977 - +0.2 1,025,984 + +0.3 1,025,984 + +0.4 1,025,984 + +0.6 1,025,984 + -0.4 1,025,984 + +0.7 1,025,985 - -0.4 1,025,985 - -1.2 1,025,985 - -0.1 1,025,985 - +0.1 1,025,985 - +0.0 1,025,985 - -0.6 1,025,985 - +0.4 1,025,985 - -0.3 1,025,985 - +0.4 1,026,015 + -0.9 1,026,089 - -0.5 1,026,089 - -0.6 1,026,198 + +0.5 1,026,198 + +0.6 1,026,199 - -1.1 1,026,199 - -0.4 1,026,208 + -0.3 1,026,309 + OH686_04995 0.35 -1.2 1,026,309 + OH686_04995 0.35 +0.3 1,026,309 + OH686_04995 0.35 -0.6 1,026,310 - OH686_04995 0.35 +0.4 1,026,310 - OH686_04995 0.35 -1.1 1,026,310 - OH686_04995 0.35 +0.4 1,026,632 + OH686_05000 0.29 -1.1 1,026,632 + OH686_05000 0.29 +0.2 1,026,632 + OH686_05000 0.29 -0.1 1,026,632 + OH686_05000 0.29 +0.7 1,026,632 + OH686_05000 0.29 +0.8 1,026,632 + OH686_05000 0.29 -0.2 1,026,632 + OH686_05000 0.29 -0.3 1,026,633 - OH686_05000 0.30 -0.0 1,026,633 - OH686_05000 0.30 -0.3 1,026,633 - OH686_05000 0.30 -1.8 1,026,633 - OH686_05000 0.30 -0.5 1,026,747 - OH686_05000 0.65 +0.1 1,026,747 - OH686_05000 0.65 -0.3 1,027,101 + OH686_05005 0.31 -0.3 1,027,101 + OH686_05005 0.31 -0.9 1,027,101 + OH686_05005 0.31 +0.6 1,027,102 - OH686_05005 0.32 +0.9 1,027,102 - OH686_05005 0.32 +0.2 1,027,102 - OH686_05005 0.32 -0.0 1,027,102 - OH686_05005 0.32 +0.9 1,027,102 - OH686_05005 0.32 -1.7 1,027,110 + OH686_05005 0.33 -1.1 1,027,110 + OH686_05005 0.33 -0.3 1,027,110 + OH686_05005 0.33 +0.4 1,027,110 + OH686_05005 0.33 -0.3 1,027,110 + OH686_05005 0.33 +0.2 1,027,110 + OH686_05005 0.33 -0.8 1,027,110 + OH686_05005 0.33 +1.9 1,027,110 + OH686_05005 0.33 +0.3 1,027,110 + OH686_05005 0.33 -0.0 1,027,110 + OH686_05005 0.33 -0.9 1,027,110 + OH686_05005 0.33 +0.2 1,027,110 + OH686_05005 0.33 +1.1 1,027,110 + OH686_05005 0.33 -0.2 1,027,110 + OH686_05005 0.33 -0.8 1,027,111 - OH686_05005 0.33 -0.4 1,027,111 - OH686_05005 0.33 +0.2 1,027,111 - OH686_05005 0.33 +0.2 1,027,111 - OH686_05005 0.33 -0.6 1,027,111 - OH686_05005 0.33 +0.6 1,027,111 - OH686_05005 0.33 +0.1 1,027,111 - OH686_05005 0.33 +0.1 1,027,111 - OH686_05005 0.33 +0.0 1,027,172 + OH686_05005 0.42 +0.2 1,027,172 + OH686_05005 0.42 -0.0 1,027,172 + OH686_05005 0.42 +0.1 1,027,172 + OH686_05005 0.42 +0.5 1,027,173 - OH686_05005 0.42 +0.2 1,027,173 - OH686_05005 0.42 -0.4 1,027,239 + OH686_05005 0.52 -0.5 1,027,239 + OH686_05005 0.52 -2.1 1,027,239 + OH686_05005 0.52 -1.2 1,027,239 + OH686_05005 0.52 +0.0 1,027,239 + OH686_05005 0.52 -0.5 1,027,240 - OH686_05005 0.52 +0.1 1,027,240 - OH686_05005 0.52 +0.2 1,027,266 + OH686_05005 0.56 -0.6 1,027,266 + OH686_05005 0.56 +1.0 1,027,266 + OH686_05005 0.56 -0.9 1,027,267 - OH686_05005 0.56 -0.7 1,027,267 - OH686_05005 0.56 +0.5 1,027,267 - OH686_05005 0.56 -0.5 1,027,267 - OH686_05005 0.56 -1.4 1,027,267 - OH686_05005 0.56 -0.0 1,027,312 + OH686_05005 0.63 +0.3 1,027,312 + OH686_05005 0.63 -1.0 1,027,312 + OH686_05005 0.63 +0.2 1,027,313 - OH686_05005 0.63 +0.2 1,027,313 - OH686_05005 0.63 +0.1 1,027,313 - OH686_05005 0.63 +0.8 1,027,313 - OH686_05005 0.63 -0.6 1,027,313 - OH686_05005 0.63 -0.2 1,027,338 + OH686_05005 0.67 +0.4 1,027,512 + +0.4 1,027,512 + +0.2 1,027,512 + -0.3 1,027,518 + -0.2 1,027,518 + +1.0 1,027,518 + +1.1 1,027,519 - +0.6 1,027,519 - -0.4 1,027,519 - +0.1 1,027,604 + OH686_05010 0.10 -0.3 1,027,604 + OH686_05010 0.10 -0.4 1,027,604 + OH686_05010 0.10 -0.2 1,027,604 + OH686_05010 0.10 -0.1 1,027,605 - OH686_05010 0.10 -0.8 1,027,605 - OH686_05010 0.10 -0.0 1,027,605 - OH686_05010 0.10 -0.6 1,027,619 + OH686_05010 0.13 +2.0 1,027,635 - OH686_05010 0.16 -0.6 1,027,694 + OH686_05010 0.28 -2.0 1,027,694 + OH686_05010 0.28 -0.3 1,027,694 + OH686_05010 0.28 -1.4 1,027,694 + OH686_05010 0.28 -0.5 1,027,694 + OH686_05010 0.28 +0.3 1,027,694 + OH686_05010 0.28 +0.9 1,027,694 + OH686_05010 0.28 +0.4 1,027,694 + OH686_05010 0.28 +0.2 1,027,694 + OH686_05010 0.28 -1.0 1,027,694 + OH686_05010 0.28 +0.2 1,027,694 + OH686_05010 0.28 -1.0 1,027,694 + OH686_05010 0.28 -0.5 1,027,694 + OH686_05010 0.28 +0.3 1,027,694 + OH686_05010 0.28 -0.4 1,027,694 + OH686_05010 0.28 -1.4 1,027,695 - OH686_05010 0.28 +1.5 1,027,695 - OH686_05010 0.28 +0.3 1,027,695 - OH686_05010 0.28 +0.0 1,027,695 - OH686_05010 0.28 -0.4 1,027,695 - OH686_05010 0.28 +1.0 1,027,695 - OH686_05010 0.28 -0.2 1,027,695 - OH686_05010 0.28 -0.4 1,027,695 - OH686_05010 0.28 -0.5 1,027,695 - OH686_05010 0.28 -0.2 1,027,695 - OH686_05010 0.28 +0.4 1,027,695 - OH686_05010 0.28 +0.2 1,027,695 - OH686_05010 0.28 +0.6 1,027,695 - OH686_05010 0.28 -1.8 1,027,695 - OH686_05010 0.28 -0.2 1,027,695 - OH686_05010 0.28 -0.2 1,027,695 - OH686_05010 0.28 +0.0 1,027,695 - OH686_05010 0.28 +0.5 1,027,695 - OH686_05010 0.28 -0.4 1,027,695 - OH686_05010 0.28 +1.2 1,027,844 + OH686_05010 0.57 +0.6 1,027,845 - OH686_05010 0.57 +0.4 1,027,845 - OH686_05010 0.57 -0.2 1,027,850 + OH686_05010 0.58 -0.0 1,027,850 + OH686_05010 0.58 -0.4 1,027,851 - OH686_05010 0.58 +0.4 1,027,902 - OH686_05010 0.68 -0.6 1,027,902 - OH686_05010 0.68 -1.1 1,028,096 + -0.4 1,028,096 + -0.8 1,028,096 + -0.2 1,028,097 - +0.1 1,028,230 + OH686_05015 0.12 -0.5 1,028,230 + OH686_05015 0.12 -0.6 1,028,230 + OH686_05015 0.12 +0.7 1,028,230 + OH686_05015 0.12 +0.3 1,028,230 + OH686_05015 0.12 +0.4 1,028,230 + OH686_05015 0.12 -0.0 1,028,231 - OH686_05015 0.12 -0.3 1,028,231 - OH686_05015 0.12 +1.2 1,028,231 - OH686_05015 0.12 -0.3 1,028,231 - OH686_05015 0.12 -0.4 1,028,231 - OH686_05015 0.12 +0.5 1,028,245 + OH686_05015 0.14 -0.6 1,028,245 + OH686_05015 0.14 -0.9 1,028,246 - OH686_05015 0.15 -0.8 1,028,246 - OH686_05015 0.15 +0.9 1,028,246 - OH686_05015 0.15 -0.5 1,028,323 + OH686_05015 0.27 +0.1 1,028,323 + OH686_05015 0.27 +0.8 1,028,323 + OH686_05015 0.27 -2.4 1,028,324 - OH686_05015 0.27 +0.4 1,028,324 - OH686_05015 0.27 -0.3 1,028,324 - OH686_05015 0.27 +0.3 1,028,324 - OH686_05015 0.27 +1.6 1,028,324 - OH686_05015 0.27 +0.7 1,028,324 - OH686_05015 0.27 +0.4 1,028,324 - OH686_05015 0.27 +1.4
Or see this region's nucleotide sequence