Experiment: Sorgoleone (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01770 and OH686_01775 are separated by 331 nucleotides OH686_01775 and OH686_01780 are separated by 125 nucleotides
OH686_01770: OH686_01770 - hypothetical protein, at 379,893 to 381,155
_01770
OH686_01775: OH686_01775 - Major outer membrane lipoprotein I, at 381,487 to 381,738
_01775
OH686_01780: OH686_01780 - L,D-transpeptidase, at 381,864 to 382,823
_01780
Position (kb) 381
382 Strain fitness (log2 ratio) -2
-1
0
1
2 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.558 kb on + strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.559 kb on - strand, within OH686_01770 at 380.584 kb on + strand, within OH686_01770 at 380.653 kb on + strand, within OH686_01770 at 380.653 kb on + strand, within OH686_01770 at 380.653 kb on + strand, within OH686_01770 at 380.653 kb on + strand, within OH686_01770 at 380.653 kb on + strand, within OH686_01770 at 380.653 kb on + strand, within OH686_01770 at 380.654 kb on - strand, within OH686_01770 at 380.654 kb on - strand, within OH686_01770 at 380.654 kb on - strand, within OH686_01770 at 380.687 kb on - strand, within OH686_01770 at 380.726 kb on + strand, within OH686_01770 at 380.726 kb on + strand, within OH686_01770 at 380.727 kb on - strand, within OH686_01770 at 380.727 kb on - strand, within OH686_01770 at 380.727 kb on - strand, within OH686_01770 at 380.834 kb on + strand, within OH686_01770 at 380.835 kb on - strand, within OH686_01770 at 380.835 kb on - strand, within OH686_01770 at 380.958 kb on + strand, within OH686_01770 at 380.958 kb on + strand, within OH686_01770 at 380.958 kb on + strand, within OH686_01770 at 380.958 kb on + strand, within OH686_01770 at 380.958 kb on + strand, within OH686_01770 at 380.958 kb on + strand, within OH686_01770 at 380.959 kb on - strand, within OH686_01770 at 380.959 kb on - strand, within OH686_01770 at 380.972 kb on + strand, within OH686_01770 at 380.972 kb on + strand, within OH686_01770 at 380.972 kb on + strand, within OH686_01770 at 380.972 kb on + strand, within OH686_01770 at 380.972 kb on + strand, within OH686_01770 at 380.973 kb on - strand, within OH686_01770 at 381.019 kb on + strand, within OH686_01770 at 381.020 kb on - strand, within OH686_01770 at 381.020 kb on - strand, within OH686_01770 at 381.120 kb on + strand at 381.120 kb on + strand at 381.121 kb on - strand at 381.121 kb on - strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.158 kb on + strand at 381.159 kb on - strand at 381.159 kb on - strand at 381.159 kb on - strand at 381.159 kb on - strand at 381.159 kb on - strand at 381.211 kb on + strand at 381.211 kb on + strand at 381.211 kb on + strand at 381.212 kb on - strand at 381.212 kb on - strand at 381.212 kb on - strand at 381.212 kb on - strand at 381.214 kb on + strand at 381.214 kb on + strand at 381.215 kb on - strand at 381.215 kb on - strand at 381.215 kb on - strand at 381.260 kb on + strand at 381.261 kb on - strand at 381.261 kb on - strand at 381.261 kb on - strand at 381.261 kb on - strand at 381.394 kb on - strand at 381.397 kb on + strand at 381.398 kb on - strand at 381.398 kb on - strand at 381.400 kb on + strand at 381.401 kb on - strand at 381.406 kb on + strand at 381.407 kb on - strand at 381.413 kb on + strand at 381.413 kb on + strand at 381.414 kb on - strand at 381.416 kb on + strand at 381.416 kb on + strand at 381.416 kb on + strand at 381.416 kb on + strand at 381.416 kb on + strand at 381.417 kb on - strand at 381.417 kb on - strand at 381.420 kb on + strand at 381.420 kb on + strand at 381.420 kb on + strand at 381.420 kb on + strand at 381.475 kb on - strand at 381.554 kb on + strand, within OH686_01775 at 381.632 kb on - strand, within OH686_01775 at 381.712 kb on - strand, within OH686_01775 at 381.736 kb on + strand at 381.737 kb on - strand at 381.737 kb on - strand at 381.791 kb on + strand at 381.857 kb on + strand at 381.857 kb on + strand at 381.857 kb on + strand at 381.857 kb on + strand at 381.857 kb on + strand at 381.858 kb on - strand at 381.858 kb on - strand at 381.858 kb on - strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.861 kb on + strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.862 kb on - strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.865 kb on + strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.866 kb on - strand at 381.912 kb on + strand at 382.090 kb on + strand, within OH686_01780 at 382.091 kb on - strand, within OH686_01780 at 382.120 kb on + strand, within OH686_01780 at 382.120 kb on + strand, within OH686_01780 at 382.121 kb on - strand, within OH686_01780 at 382.121 kb on - strand, within OH686_01780 at 382.121 kb on - strand, within OH686_01780 at 382.141 kb on - strand, within OH686_01780 at 382.196 kb on + strand, within OH686_01780 at 382.197 kb on - strand, within OH686_01780 at 382.197 kb on - strand, within OH686_01780 at 382.197 kb on - strand, within OH686_01780 at 382.324 kb on + strand, within OH686_01780 at 382.324 kb on + strand, within OH686_01780 at 382.324 kb on + strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.325 kb on - strand, within OH686_01780 at 382.473 kb on + strand, within OH686_01780 at 382.473 kb on + strand, within OH686_01780 at 382.473 kb on + strand, within OH686_01780 at 382.474 kb on - strand, within OH686_01780 at 382.474 kb on - strand, within OH686_01780 at 382.474 kb on - strand, within OH686_01780 at 382.474 kb on - strand, within OH686_01780 at 382.474 kb on - strand, within OH686_01780 at 382.498 kb on + strand, within OH686_01780 at 382.498 kb on + strand, within OH686_01780 at 382.498 kb on + strand, within OH686_01780 at 382.498 kb on + strand, within OH686_01780 at 382.498 kb on + strand, within OH686_01780 at 382.498 kb on + strand, within OH686_01780 at 382.499 kb on - strand, within OH686_01780 at 382.499 kb on - strand, within OH686_01780 at 382.499 kb on - strand, within OH686_01780 at 382.499 kb on - strand, within OH686_01780 at 382.499 kb on - strand, within OH686_01780 at 382.499 kb on - strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.501 kb on + strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.502 kb on - strand, within OH686_01780 at 382.561 kb on + strand, within OH686_01780 at 382.561 kb on + strand, within OH686_01780 at 382.561 kb on + strand, within OH686_01780 at 382.561 kb on + strand, within OH686_01780 at 382.562 kb on - strand, within OH686_01780 at 382.562 kb on - strand, within OH686_01780 at 382.562 kb on - strand, within OH686_01780 at 382.562 kb on - strand, within OH686_01780 at 382.642 kb on + strand, within OH686_01780 at 382.642 kb on + strand, within OH686_01780 at 382.642 kb on + strand, within OH686_01780 at 382.643 kb on - strand, within OH686_01780 at 382.687 kb on + strand, within OH686_01780 at 382.687 kb on + strand, within OH686_01780 at 382.687 kb on + strand, within OH686_01780 at 382.687 kb on + strand, within OH686_01780 at 382.687 kb on + strand, within OH686_01780 at 382.687 kb on + strand, within OH686_01780 at 382.688 kb on - strand, within OH686_01780 at 382.688 kb on - strand, within OH686_01780 at 382.688 kb on - strand, within OH686_01780 at 382.688 kb on - strand, within OH686_01780 at 382.688 kb on - strand, within OH686_01780 at 382.688 kb on - strand, within OH686_01780 at 382.721 kb on + strand, within OH686_01780 at 382.721 kb on + strand, within OH686_01780 at 382.721 kb on + strand, within OH686_01780 at 382.721 kb on + strand, within OH686_01780
Per-strain Table
Position Strand Gene LocusTag Fraction Sorgoleone (C) remove 380,558 + OH686_01770 0.53 +1.0 380,558 + OH686_01770 0.53 -0.0 380,558 + OH686_01770 0.53 +0.1 380,558 + OH686_01770 0.53 -0.0 380,558 + OH686_01770 0.53 +0.3 380,558 + OH686_01770 0.53 +0.2 380,558 + OH686_01770 0.53 -0.1 380,558 + OH686_01770 0.53 -0.9 380,558 + OH686_01770 0.53 -0.7 380,559 - OH686_01770 0.53 +0.1 380,559 - OH686_01770 0.53 +1.0 380,559 - OH686_01770 0.53 -0.9 380,559 - OH686_01770 0.53 -0.8 380,559 - OH686_01770 0.53 -0.4 380,559 - OH686_01770 0.53 -0.1 380,559 - OH686_01770 0.53 +0.9 380,559 - OH686_01770 0.53 +0.3 380,559 - OH686_01770 0.53 -1.6 380,584 + OH686_01770 0.55 +0.2 380,653 + OH686_01770 0.60 -1.1 380,653 + OH686_01770 0.60 -0.3 380,653 + OH686_01770 0.60 +0.6 380,653 + OH686_01770 0.60 -0.0 380,653 + OH686_01770 0.60 +0.0 380,653 + OH686_01770 0.60 -0.2 380,654 - OH686_01770 0.60 -0.6 380,654 - OH686_01770 0.60 +0.2 380,654 - OH686_01770 0.60 +1.1 380,687 - OH686_01770 0.63 -1.0 380,726 + OH686_01770 0.66 -0.1 380,726 + OH686_01770 0.66 -0.7 380,727 - OH686_01770 0.66 +0.2 380,727 - OH686_01770 0.66 +0.6 380,727 - OH686_01770 0.66 +1.0 380,834 + OH686_01770 0.75 -0.8 380,835 - OH686_01770 0.75 +0.4 380,835 - OH686_01770 0.75 +0.5 380,958 + OH686_01770 0.84 +0.7 380,958 + OH686_01770 0.84 +0.2 380,958 + OH686_01770 0.84 -0.9 380,958 + OH686_01770 0.84 -0.1 380,958 + OH686_01770 0.84 -0.3 380,958 + OH686_01770 0.84 -0.7 380,959 - OH686_01770 0.84 -0.1 380,959 - OH686_01770 0.84 +0.1 380,972 + OH686_01770 0.85 +1.3 380,972 + OH686_01770 0.85 +0.0 380,972 + OH686_01770 0.85 +1.0 380,972 + OH686_01770 0.85 -0.2 380,972 + OH686_01770 0.85 +1.1 380,973 - OH686_01770 0.86 +0.2 381,019 + OH686_01770 0.89 +0.3 381,020 - OH686_01770 0.89 +0.3 381,020 - OH686_01770 0.89 -1.2 381,120 + +0.7 381,120 + +1.1 381,121 - -1.3 381,121 - -1.2 381,158 + -0.9 381,158 + -0.7 381,158 + -0.6 381,158 + +0.0 381,158 + -1.0 381,158 + -0.3 381,158 + +0.9 381,158 + +0.4 381,158 + -0.8 381,159 - -1.8 381,159 - -0.2 381,159 - -0.4 381,159 - +0.2 381,159 - -0.5 381,211 + +0.9 381,211 + -0.3 381,211 + -0.1 381,212 - -0.5 381,212 - -0.3 381,212 - +0.5 381,212 - -0.3 381,214 + -0.8 381,214 + -0.8 381,215 - -0.4 381,215 - +0.3 381,215 - +0.3 381,260 + +0.4 381,261 - +0.6 381,261 - +0.6 381,261 - -0.1 381,261 - -0.5 381,394 - -0.6 381,397 + -0.4 381,398 - +0.9 381,398 - +0.9 381,400 + -0.2 381,401 - +0.1 381,406 + +0.3 381,407 - +0.7 381,413 + -0.3 381,413 + +1.0 381,414 - -0.1 381,416 + -0.4 381,416 + +0.6 381,416 + -0.0 381,416 + +0.3 381,416 + -1.1 381,417 - -1.1 381,417 - -0.9 381,420 + -1.7 381,420 + -1.4 381,420 + -0.7 381,420 + +1.1 381,475 - -0.9 381,554 + OH686_01775 0.27 -0.4 381,632 - OH686_01775 0.58 -1.7 381,712 - OH686_01775 0.89 -0.1 381,736 + -1.2 381,737 - -0.1 381,737 - -1.4 381,791 + +0.4 381,857 + -0.4 381,857 + -0.2 381,857 + -0.9 381,857 + -0.3 381,857 + +0.1 381,858 - -0.4 381,858 - +0.8 381,858 - -0.6 381,861 + +0.1 381,861 + -0.3 381,861 + +0.4 381,861 + +0.6 381,861 + -1.4 381,861 + +0.4 381,861 + +1.0 381,861 + -0.7 381,861 + +0.3 381,861 + +0.3 381,862 - +0.7 381,862 - -0.6 381,862 - -1.1 381,862 - -0.6 381,862 - +1.0 381,862 - -1.0 381,862 - -0.2 381,862 - -0.0 381,862 - +0.9 381,862 - -0.2 381,862 - +0.1 381,862 - +0.3 381,862 - +0.3 381,862 - +1.1 381,862 - +0.2 381,862 - +0.1 381,865 + +0.2 381,865 + -0.2 381,865 + -0.3 381,865 + -0.4 381,865 + +0.3 381,865 + +0.1 381,865 + +0.7 381,865 + -0.8 381,865 + -0.1 381,865 + -0.5 381,865 + +0.4 381,866 - +0.8 381,866 - -0.0 381,866 - -0.2 381,866 - +0.2 381,866 - +0.9 381,866 - +0.3 381,866 - -0.2 381,866 - +0.1 381,866 - +0.1 381,912 + +0.2 382,090 + OH686_01780 0.24 +0.6 382,091 - OH686_01780 0.24 -2.0 382,120 + OH686_01780 0.27 -1.4 382,120 + OH686_01780 0.27 +1.6 382,121 - OH686_01780 0.27 -1.1 382,121 - OH686_01780 0.27 +2.7 382,121 - OH686_01780 0.27 -0.9 382,141 - OH686_01780 0.29 -1.1 382,196 + OH686_01780 0.35 +0.3 382,197 - OH686_01780 0.35 -0.9 382,197 - OH686_01780 0.35 -0.6 382,197 - OH686_01780 0.35 -0.9 382,324 + OH686_01780 0.48 -1.6 382,324 + OH686_01780 0.48 +0.5 382,324 + OH686_01780 0.48 -0.1 382,325 - OH686_01780 0.48 -1.3 382,325 - OH686_01780 0.48 +0.1 382,325 - OH686_01780 0.48 -0.8 382,325 - OH686_01780 0.48 -0.1 382,325 - OH686_01780 0.48 +0.9 382,325 - OH686_01780 0.48 -0.1 382,325 - OH686_01780 0.48 -0.9 382,325 - OH686_01780 0.48 -2.3 382,325 - OH686_01780 0.48 -0.9 382,325 - OH686_01780 0.48 +0.9 382,325 - OH686_01780 0.48 -1.6 382,325 - OH686_01780 0.48 -1.1 382,325 - OH686_01780 0.48 -0.7 382,325 - OH686_01780 0.48 -0.1 382,473 + OH686_01780 0.63 +0.7 382,473 + OH686_01780 0.63 -1.3 382,473 + OH686_01780 0.63 -1.3 382,474 - OH686_01780 0.64 -0.7 382,474 - OH686_01780 0.64 -1.7 382,474 - OH686_01780 0.64 -1.1 382,474 - OH686_01780 0.64 +0.1 382,474 - OH686_01780 0.64 +0.9 382,498 + OH686_01780 0.66 -0.4 382,498 + OH686_01780 0.66 -1.7 382,498 + OH686_01780 0.66 -0.8 382,498 + OH686_01780 0.66 -1.1 382,498 + OH686_01780 0.66 -1.4 382,498 + OH686_01780 0.66 -2.6 382,499 - OH686_01780 0.66 +0.9 382,499 - OH686_01780 0.66 +1.5 382,499 - OH686_01780 0.66 -0.4 382,499 - OH686_01780 0.66 -0.1 382,499 - OH686_01780 0.66 -1.4 382,499 - OH686_01780 0.66 -0.1 382,501 + OH686_01780 0.66 +0.0 382,501 + OH686_01780 0.66 +0.0 382,501 + OH686_01780 0.66 -1.1 382,501 + OH686_01780 0.66 +0.3 382,501 + OH686_01780 0.66 +0.9 382,501 + OH686_01780 0.66 +1.5 382,501 + OH686_01780 0.66 +0.9 382,501 + OH686_01780 0.66 -0.1 382,501 + OH686_01780 0.66 -1.6 382,501 + OH686_01780 0.66 -0.7 382,501 + OH686_01780 0.66 +0.6 382,501 + OH686_01780 0.66 -0.9 382,502 - OH686_01780 0.66 -0.9 382,502 - OH686_01780 0.66 -0.3 382,502 - OH686_01780 0.66 -0.7 382,502 - OH686_01780 0.66 -0.4 382,502 - OH686_01780 0.66 -1.1 382,502 - OH686_01780 0.66 -0.7 382,502 - OH686_01780 0.66 -0.4 382,502 - OH686_01780 0.66 -1.6 382,502 - OH686_01780 0.66 -0.1 382,502 - OH686_01780 0.66 -1.3 382,502 - OH686_01780 0.66 -1.4 382,502 - OH686_01780 0.66 +0.6 382,502 - OH686_01780 0.66 +0.2 382,561 + OH686_01780 0.73 -0.4 382,561 + OH686_01780 0.73 -0.2 382,561 + OH686_01780 0.73 -1.1 382,561 + OH686_01780 0.73 -1.8 382,562 - OH686_01780 0.73 +0.5 382,562 - OH686_01780 0.73 +1.0 382,562 - OH686_01780 0.73 -0.1 382,562 - OH686_01780 0.73 +0.9 382,642 + OH686_01780 0.81 -0.7 382,642 + OH686_01780 0.81 -1.3 382,642 + OH686_01780 0.81 -0.1 382,643 - OH686_01780 0.81 +1.9 382,687 + OH686_01780 0.86 -0.1 382,687 + OH686_01780 0.86 -0.3 382,687 + OH686_01780 0.86 -0.4 382,687 + OH686_01780 0.86 -0.7 382,687 + OH686_01780 0.86 -0.4 382,687 + OH686_01780 0.86 -0.2 382,688 - OH686_01780 0.86 -0.7 382,688 - OH686_01780 0.86 -0.9 382,688 - OH686_01780 0.86 +0.1 382,688 - OH686_01780 0.86 +0.9 382,688 - OH686_01780 0.86 -0.1 382,688 - OH686_01780 0.86 -0.9 382,721 + OH686_01780 0.89 +0.0 382,721 + OH686_01780 0.89 -0.7 382,721 + OH686_01780 0.89 -1.4 382,721 + OH686_01780 0.89 -0.0
Or see this region's nucleotide sequence