Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04034 and ECD_04035 overlap by 29 nucleotides ECD_04035 and ECD_04036 are separated by 18 nucleotides
ECD_04034: ECD_04034 - bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase, at 4,300,586 to 4,302,133
_04034
ECD_04035: ECD_04035 - tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein, at 4,302,105 to 4,302,566
_04035
ECD_04036: ECD_04036 - N-acetylmuramoyl-l-alanine amidase II, at 4,302,585 to 4,303,922
_04036
Position (kb) 4302
4303 Strain fitness (log2 ratio) -1
0
1
2 at 4301.246 kb on - strand, within ECD_04034 at 4301.398 kb on + strand, within ECD_04034 at 4301.399 kb on - strand, within ECD_04034 at 4301.733 kb on + strand, within ECD_04034 at 4301.734 kb on - strand, within ECD_04034 at 4301.734 kb on - strand, within ECD_04034 at 4301.769 kb on + strand, within ECD_04034 at 4301.769 kb on + strand, within ECD_04034 at 4301.770 kb on - strand, within ECD_04034 at 4301.770 kb on - strand, within ECD_04034 at 4301.790 kb on + strand, within ECD_04034 at 4301.790 kb on + strand, within ECD_04034 at 4301.791 kb on - strand, within ECD_04034 at 4301.860 kb on - strand, within ECD_04034 at 4301.866 kb on + strand, within ECD_04034 at 4301.926 kb on + strand, within ECD_04034 at 4301.926 kb on + strand, within ECD_04034 at 4302.009 kb on + strand at 4302.066 kb on + strand at 4302.589 kb on + strand at 4302.589 kb on + strand at 4302.589 kb on + strand at 4302.590 kb on - strand at 4302.590 kb on - strand at 4302.591 kb on + strand at 4302.591 kb on + strand at 4302.592 kb on - strand at 4302.666 kb on - strand at 4302.872 kb on - strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.939 kb on + strand, within ECD_04036 at 4302.940 kb on - strand, within ECD_04036 at 4302.940 kb on - strand, within ECD_04036 at 4303.080 kb on - strand, within ECD_04036 at 4303.106 kb on + strand, within ECD_04036 at 4303.107 kb on - strand, within ECD_04036 at 4303.107 kb on - strand, within ECD_04036 at 4303.110 kb on - strand, within ECD_04036 at 4303.110 kb on - strand, within ECD_04036 at 4303.154 kb on + strand, within ECD_04036 at 4303.160 kb on + strand, within ECD_04036 at 4303.293 kb on - strand, within ECD_04036 at 4303.325 kb on + strand, within ECD_04036 at 4303.325 kb on + strand, within ECD_04036 at 4303.358 kb on + strand, within ECD_04036 at 4303.358 kb on + strand, within ECD_04036 at 4303.359 kb on - strand, within ECD_04036 at 4303.559 kb on - strand, within ECD_04036
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 4,301,246 - ECD_04034 0.43 +0.4 4,301,398 + ECD_04034 0.52 -0.2 4,301,399 - ECD_04034 0.53 +0.4 4,301,733 + ECD_04034 0.74 -0.2 4,301,734 - ECD_04034 0.74 +1.2 4,301,734 - ECD_04034 0.74 -0.1 4,301,769 + ECD_04034 0.76 +2.4 4,301,769 + ECD_04034 0.76 +0.7 4,301,770 - ECD_04034 0.76 -0.3 4,301,770 - ECD_04034 0.76 -1.4 4,301,790 + ECD_04034 0.78 +0.3 4,301,790 + ECD_04034 0.78 -0.3 4,301,791 - ECD_04034 0.78 -0.3 4,301,860 - ECD_04034 0.82 +0.4 4,301,866 + ECD_04034 0.83 -0.4 4,301,926 + ECD_04034 0.87 +1.4 4,301,926 + ECD_04034 0.87 +0.6 4,302,009 + -0.9 4,302,066 + -0.5 4,302,589 + +0.7 4,302,589 + -0.2 4,302,589 + +0.6 4,302,590 - -0.0 4,302,590 - +0.6 4,302,591 + +0.4 4,302,591 + +0.4 4,302,592 - -1.4 4,302,666 - +0.7 4,302,872 - ECD_04036 0.21 -0.3 4,302,939 + ECD_04036 0.26 +0.2 4,302,939 + ECD_04036 0.26 -0.3 4,302,939 + ECD_04036 0.26 -1.1 4,302,939 + ECD_04036 0.26 +0.3 4,302,940 - ECD_04036 0.27 -1.5 4,302,940 - ECD_04036 0.27 -0.2 4,303,080 - ECD_04036 0.37 -1.0 4,303,106 + ECD_04036 0.39 +0.6 4,303,107 - ECD_04036 0.39 -1.3 4,303,107 - ECD_04036 0.39 -0.1 4,303,110 - ECD_04036 0.39 -0.5 4,303,110 - ECD_04036 0.39 -0.5 4,303,154 + ECD_04036 0.43 -0.0 4,303,160 + ECD_04036 0.43 -0.3 4,303,293 - ECD_04036 0.53 -1.4 4,303,325 + ECD_04036 0.55 +0.4 4,303,325 + ECD_04036 0.55 +0.1 4,303,358 + ECD_04036 0.58 +0.8 4,303,358 + ECD_04036 0.58 -0.2 4,303,359 - ECD_04036 0.58 -0.3 4,303,559 - ECD_04036 0.73 +0.4
Or see this region's nucleotide sequence