Strain Fitness in Escherichia coli BL21 around ECD_03915

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03913 and ECD_03914 are separated by 170 nucleotidesECD_03914 and ECD_03915 are separated by 109 nucleotidesECD_03915 and ECD_03916 are separated by 18 nucleotides ECD_03913: ECD_03913 - glycerol-3-phosphate O-acyltransferase, at 4,161,415 to 4,163,838 _03913 ECD_03914: ECD_03914 - diacylglycerol kinase, at 4,164,009 to 4,164,377 _03914 ECD_03915: ECD_03915 - transcriptional repressor of SOS regulon, at 4,164,487 to 4,165,095 _03915 ECD_03916: ECD_03916 - oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein, at 4,165,114 to 4,166,493 _03916 Position (kb) 4164 4165 4166Strain fitness (log2 ratio) -2 -1 0 1at 4163.963 kb on - strandat 4163.968 kb on + strandat 4163.969 kb on - strandat 4163.988 kb on + strandat 4163.993 kb on + strandat 4163.993 kb on + strandat 4164.017 kb on + strandat 4164.020 kb on + strandat 4164.296 kb on + strand, within ECD_03914at 4164.407 kb on + strandat 4165.094 kb on - strandat 4165.098 kb on + strandat 4165.098 kb on + strandat 4165.098 kb on + strandat 4165.098 kb on + strandat 4165.098 kb on + strandat 4165.099 kb on - strandat 4165.361 kb on + strand, within ECD_03916at 4165.396 kb on + strand, within ECD_03916at 4165.397 kb on - strand, within ECD_03916at 4165.397 kb on - strand, within ECD_03916at 4165.397 kb on - strand, within ECD_03916at 4165.397 kb on - strand, within ECD_03916at 4165.397 kb on - strand, within ECD_03916at 4165.473 kb on - strand, within ECD_03916at 4165.489 kb on - strand, within ECD_03916at 4165.527 kb on + strand, within ECD_03916at 4165.611 kb on - strand, within ECD_03916at 4165.623 kb on - strand, within ECD_03916at 4165.636 kb on + strand, within ECD_03916at 4165.662 kb on - strand, within ECD_03916at 4165.719 kb on + strand, within ECD_03916at 4165.719 kb on + strand, within ECD_03916at 4165.720 kb on - strand, within ECD_03916at 4165.788 kb on - strand, within ECD_03916at 4165.797 kb on + strand, within ECD_03916at 4165.937 kb on + strand, within ECD_03916at 4165.937 kb on + strand, within ECD_03916at 4165.937 kb on + strand, within ECD_03916at 4165.937 kb on + strand, within ECD_03916at 4166.011 kb on + strand, within ECD_03916at 4166.062 kb on + strand, within ECD_03916at 4166.063 kb on - strand, within ECD_03916at 4166.063 kb on - strand, within ECD_03916at 4166.063 kb on - strand, within ECD_03916

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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4,163,963 - +0.6
4,163,968 + +0.6
4,163,969 - +0.6
4,163,988 + +0.5
4,163,993 + +1.3
4,163,993 + -0.3
4,164,017 + -0.2
4,164,020 + -1.4
4,164,296 + ECD_03914 0.78 -2.2
4,164,407 + +1.0
4,165,094 - -0.0
4,165,098 + +0.4
4,165,098 + +0.8
4,165,098 + +0.1
4,165,098 + +1.3
4,165,098 + -0.0
4,165,099 - -1.6
4,165,361 + ECD_03916 0.18 +0.2
4,165,396 + ECD_03916 0.20 -0.3
4,165,397 - ECD_03916 0.21 +0.5
4,165,397 - ECD_03916 0.21 +1.0
4,165,397 - ECD_03916 0.21 -1.2
4,165,397 - ECD_03916 0.21 +0.5
4,165,397 - ECD_03916 0.21 +0.4
4,165,473 - ECD_03916 0.26 +0.0
4,165,489 - ECD_03916 0.27 +1.2
4,165,527 + ECD_03916 0.30 -0.3
4,165,611 - ECD_03916 0.36 +0.7
4,165,623 - ECD_03916 0.37 +0.3
4,165,636 + ECD_03916 0.38 -0.8
4,165,662 - ECD_03916 0.40 -0.7
4,165,719 + ECD_03916 0.44 +0.5
4,165,719 + ECD_03916 0.44 +0.3
4,165,720 - ECD_03916 0.44 +0.6
4,165,788 - ECD_03916 0.49 -0.4
4,165,797 + ECD_03916 0.49 +0.6
4,165,937 + ECD_03916 0.60 +0.0
4,165,937 + ECD_03916 0.60 +0.7
4,165,937 + ECD_03916 0.60 -0.2
4,165,937 + ECD_03916 0.60 -0.0
4,166,011 + ECD_03916 0.65 -0.3
4,166,062 + ECD_03916 0.69 +0.3
4,166,063 - ECD_03916 0.69 +0.0
4,166,063 - ECD_03916 0.69 -0.2
4,166,063 - ECD_03916 0.69 +0.0

Or see this region's nucleotide sequence