Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03860 and ECD_03861 are separated by 412 nucleotides ECD_03861 and ECD_03862 are separated by 66 nucleotides ECD_03862 and ECD_03863 are separated by 319 nucleotides
ECD_03860: ECD_03860 - 50S ribosomal subunit protein L1, at 4,086,930 to 4,087,634
_03860
ECD_03861: ECD_03861 - 50S ribosomal subunit protein L10, at 4,088,047 to 4,088,544
_03861
ECD_03862: ECD_03862 - 50S ribosomal subunit protein L7/L12, at 4,088,611 to 4,088,976
_03862
ECD_03863: ECD_03863 - RNA polymerase, beta subunit, at 4,089,296 to 4,093,324
_03863
Position (kb)
4088
4089 Strain fitness (log2 ratio)
-2
-1
0
1 at 4087.633 kb on - strand at 4087.641 kb on + strand at 4087.641 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.682 kb on + strand at 4087.689 kb on + strand at 4087.689 kb on + strand at 4087.700 kb on + strand at 4087.700 kb on + strand at 4087.700 kb on + strand at 4087.700 kb on + strand at 4087.711 kb on + strand at 4087.757 kb on + strand at 4087.757 kb on + strand at 4087.757 kb on + strand at 4087.761 kb on + strand at 4087.761 kb on + strand at 4087.761 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.812 kb on + strand at 4089.124 kb on + strand at 4089.124 kb on + strand at 4089.124 kb on + strand at 4089.124 kb on + strand at 4089.127 kb on + strand at 4089.127 kb on + strand at 4089.127 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 4,087,633 - -0.2 4,087,641 + -0.4 4,087,641 + -0.6 4,087,680 + +1.5 4,087,680 + -0.2 4,087,680 + +0.9 4,087,680 + -0.4 4,087,680 + -1.4 4,087,682 + -0.1 4,087,689 + +0.0 4,087,689 + -0.9 4,087,700 + -0.4 4,087,700 + +0.4 4,087,700 + -0.6 4,087,700 + +0.1 4,087,711 + -0.2 4,087,757 + -0.7 4,087,757 + +0.2 4,087,757 + -1.0 4,087,761 + +0.3 4,087,761 + -1.1 4,087,761 + -0.2 4,087,765 + -0.5 4,087,765 + +0.4 4,087,765 + -0.6 4,087,765 + +0.1 4,087,765 + -0.4 4,087,765 + +0.3 4,087,765 + +0.2 4,087,765 + -2.2 4,087,812 + -0.3 4,089,124 + -0.0 4,089,124 + -1.4 4,089,124 + -0.8 4,089,124 + -2.3 4,089,127 + +0.2 4,089,127 + +0.9 4,089,127 + -0.0
Or see this region's nucleotide sequence