Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03858 and ECD_03859 are separated by 158 nucleotides ECD_03859 and ECD_03860 are separated by 3 nucleotides ECD_03860 and ECD_03861 are separated by 412 nucleotides ECD_03861 and ECD_03862 are separated by 66 nucleotides
ECD_03858: ECD_03858 - transcription termination factor, at 4,085,794 to 4,086,339
_03858
ECD_03859: ECD_03859 - 50S ribosomal subunit protein L11, at 4,086,498 to 4,086,926
_03859
ECD_03860: ECD_03860 - 50S ribosomal subunit protein L1, at 4,086,930 to 4,087,634
_03860
ECD_03861: ECD_03861 - 50S ribosomal subunit protein L10, at 4,088,047 to 4,088,544
_03861
ECD_03862: ECD_03862 - 50S ribosomal subunit protein L7/L12, at 4,088,611 to 4,088,976
_03862
Position (kb)
4086
4087
4088 Strain fitness (log2 ratio)
-2
-1
0
1 at 4087.633 kb on - strand at 4087.641 kb on + strand at 4087.641 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.680 kb on + strand at 4087.682 kb on + strand at 4087.689 kb on + strand at 4087.689 kb on + strand at 4087.700 kb on + strand at 4087.700 kb on + strand at 4087.700 kb on + strand at 4087.700 kb on + strand at 4087.711 kb on + strand at 4087.757 kb on + strand at 4087.757 kb on + strand at 4087.757 kb on + strand at 4087.761 kb on + strand at 4087.761 kb on + strand at 4087.761 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.765 kb on + strand at 4087.812 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 4,087,633 - -0.2 4,087,641 + -0.4 4,087,641 + -0.6 4,087,680 + +1.5 4,087,680 + -0.2 4,087,680 + +0.9 4,087,680 + -0.4 4,087,680 + -1.4 4,087,682 + -0.1 4,087,689 + +0.0 4,087,689 + -0.9 4,087,700 + -0.4 4,087,700 + +0.4 4,087,700 + -0.6 4,087,700 + +0.1 4,087,711 + -0.2 4,087,757 + -0.7 4,087,757 + +0.2 4,087,757 + -1.0 4,087,761 + +0.3 4,087,761 + -1.1 4,087,761 + -0.2 4,087,765 + -0.5 4,087,765 + +0.4 4,087,765 + -0.6 4,087,765 + +0.1 4,087,765 + -0.4 4,087,765 + +0.3 4,087,765 + +0.2 4,087,765 + -2.2 4,087,812 + -0.3
Or see this region's nucleotide sequence