Strain Fitness in Escherichia coli BL21 around ECD_03860

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03858 and ECD_03859 are separated by 158 nucleotidesECD_03859 and ECD_03860 are separated by 3 nucleotidesECD_03860 and ECD_03861 are separated by 412 nucleotidesECD_03861 and ECD_03862 are separated by 66 nucleotides ECD_03858: ECD_03858 - transcription termination factor, at 4,085,794 to 4,086,339 _03858 ECD_03859: ECD_03859 - 50S ribosomal subunit protein L11, at 4,086,498 to 4,086,926 _03859 ECD_03860: ECD_03860 - 50S ribosomal subunit protein L1, at 4,086,930 to 4,087,634 _03860 ECD_03861: ECD_03861 - 50S ribosomal subunit protein L10, at 4,088,047 to 4,088,544 _03861 ECD_03862: ECD_03862 - 50S ribosomal subunit protein L7/L12, at 4,088,611 to 4,088,976 _03862 Position (kb) 4086 4087 4088Strain fitness (log2 ratio) -2 -1 0 1at 4087.633 kb on - strandat 4087.641 kb on + strandat 4087.641 kb on + strandat 4087.680 kb on + strandat 4087.680 kb on + strandat 4087.680 kb on + strandat 4087.680 kb on + strandat 4087.680 kb on + strandat 4087.682 kb on + strandat 4087.689 kb on + strandat 4087.689 kb on + strandat 4087.700 kb on + strandat 4087.700 kb on + strandat 4087.700 kb on + strandat 4087.700 kb on + strandat 4087.711 kb on + strandat 4087.757 kb on + strandat 4087.757 kb on + strandat 4087.757 kb on + strandat 4087.761 kb on + strandat 4087.761 kb on + strandat 4087.761 kb on + strandat 4087.765 kb on + strandat 4087.765 kb on + strandat 4087.765 kb on + strandat 4087.765 kb on + strandat 4087.765 kb on + strandat 4087.765 kb on + strandat 4087.765 kb on + strandat 4087.765 kb on + strandat 4087.812 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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4,087,633 - -0.2
4,087,641 + -0.4
4,087,641 + -0.6
4,087,680 + +1.5
4,087,680 + -0.2
4,087,680 + +0.9
4,087,680 + -0.4
4,087,680 + -1.4
4,087,682 + -0.1
4,087,689 + +0.0
4,087,689 + -0.9
4,087,700 + -0.4
4,087,700 + +0.4
4,087,700 + -0.6
4,087,700 + +0.1
4,087,711 + -0.2
4,087,757 + -0.7
4,087,757 + +0.2
4,087,757 + -1.0
4,087,761 + +0.3
4,087,761 + -1.1
4,087,761 + -0.2
4,087,765 + -0.5
4,087,765 + +0.4
4,087,765 + -0.6
4,087,765 + +0.1
4,087,765 + -0.4
4,087,765 + +0.3
4,087,765 + +0.2
4,087,765 + -2.2
4,087,812 + -0.3

Or see this region's nucleotide sequence