Strain Fitness in Escherichia coli BL21 around ECD_03858

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03856 and ECD_03857 are separated by 229 nucleotidesECD_03857 and ECD_03858 are separated by 1 nucleotidesECD_03858 and ECD_03859 are separated by 158 nucleotidesECD_03859 and ECD_03860 are separated by 3 nucleotides ECD_03856: ECD_03856 - translation elongation factor EF-Tu 2, at 4,083,995 to 4,085,179 _03856 ECD_03857: ECD_03857 - preprotein translocase membrane subunit, at 4,085,409 to 4,085,792 _03857 ECD_03858: ECD_03858 - transcription termination factor, at 4,085,794 to 4,086,339 _03858 ECD_03859: ECD_03859 - 50S ribosomal subunit protein L11, at 4,086,498 to 4,086,926 _03859 ECD_03860: ECD_03860 - 50S ribosomal subunit protein L1, at 4,086,930 to 4,087,634 _03860 Position (kb) 4085 4086 4087Strain fitness (log2 ratio) -1 0 1at 4085.177 kb on + strandat 4085.177 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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4,085,177 + +0.9
4,085,177 + -0.5

Or see this region's nucleotide sequence